Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, extracellular
Predictor Summary:
Predictor Summary:
- extracellular 7
- endoplasmic reticulum 6
- vacuole 6
- plasma membrane 6
- golgi 5
- plastid 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH31373 | Soybean | extracellular | 86.73 | 91.64 |
| KRH31375 | Soybean | nucleus | 72.96 | 71.14 |
| KRG97506 | Soybean | endoplasmic reticulum, golgi | 73.47 | 71.11 |
| KRH57176 | Soybean | nucleus | 73.47 | 70.94 |
| KRH03893 | Soybean | nucleus | 72.96 | 70.44 |
| KRH63675 | Soybean | endoplasmic reticulum, extracellular, vacuole | 72.19 | 69.36 |
| KRH58231 | Soybean | extracellular | 70.66 | 68.56 |
| KRH54276 | Soybean | endoplasmic reticulum, golgi, vacuole | 71.17 | 68.38 |
| KRG93976 | Soybean | extracellular | 70.15 | 68.07 |
| KRG90246 | Soybean | nucleus | 64.8 | 56.7 |
| KRH33474 | Soybean | nucleus | 64.54 | 56.22 |
| KRG99852 | Soybean | nucleus | 63.27 | 54.99 |
| KRH46795 | Soybean | nucleus | 63.27 | 54.99 |
| KRH11474 | Soybean | extracellular | 51.53 | 54.16 |
| KRH36488 | Soybean | extracellular | 53.06 | 52.39 |
| KRH54508 | Soybean | extracellular | 44.39 | 52.25 |
| KRH63402 | Soybean | extracellular | 57.4 | 51.72 |
| KRH02031 | Soybean | extracellular | 52.3 | 51.51 |
| KRH36487 | Soybean | extracellular | 36.99 | 50.88 |
| KRH01130 | Soybean | extracellular | 54.08 | 48.18 |
| KRH67761 | Soybean | endoplasmic reticulum, extracellular, vacuole | 56.89 | 47.45 |
| KRH19954 | Soybean | endoplasmic reticulum, extracellular, plasma membrane | 57.14 | 46.96 |
| KRG93502 | Soybean | extracellular | 51.79 | 45.82 |
| KRH18498 | Soybean | endoplasmic reticulum, extracellular, vacuole | 51.53 | 45.6 |
| KRH69345 | Soybean | extracellular | 51.79 | 45.41 |
| KRH74782 | Soybean | extracellular | 51.79 | 45.31 |
| KRH45851 | Soybean | extracellular | 51.02 | 44.35 |
| KRG90767 | Soybean | extracellular | 55.36 | 43.23 |
| KRH35994 | Soybean | extracellular | 55.36 | 43.06 |
Protein Annotations
| KEGG:00040+4.2.2.2 | Gene3D:2.160.20.10 | MapMan:21.3.5.2 | EMBL:ACUP02010799 | InterPro:AmbAllergen | EnsemblPlantsGene:GLYMA_18G012300 |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005975 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009056 | GO:GO:0009987 | GO:GO:0016829 | GO:GO:0030570 | GO:GO:0045490 | GO:GO:0046872 |
| InterPro:IPR012334 | UniProt:K7MPC4 | EnsemblPlants:KRG97507 | ProteinID:KRG97507 | ProteinID:KRG97507.1 | PFAM:PF00544 |
| PRINTS:PR00807 | PANTHER:PTHR31683 | PANTHER:PTHR31683:SF26 | InterPro:Pec_lyase | InterPro:Pectin_lyas_fold | InterPro:Pectin_lyase_fold/virulence |
| SMART:SM00656 | SUPFAM:SSF51126 | SignalP:SignalP-noTM | UniParc:UPI000296C7BC | SEG:seg | : |
Description
hypothetical protein
Coordinates
chr18:+:868323..870618
Molecular Weight (calculated)
43270.7 Da
IEP (calculated)
9.267
GRAVY (calculated)
-0.308
Length
392 amino acids
Sequence
(BLAST)
(BLAST)
001: MAFSFTFMFQ FLLLAPSVIY ASPVQDPELV IQEVQKSING SRRNLGYLSC GTGNPIDDCW RCDPNWERNR KRLASCAIGF GKHAIGGKDG KIYVVTDPSD
101: NPVNPKPGTL RHGVIQQEPL WIIFKHDMVI KLHKDLLVNS YKTIDGRGAT IHIAGGGPCI RVQKKTNIII HGIHIHDCKR GGVDIARSDG DGITIFGGSH
201: VWVDHCSLSN CFDGLIDVVH GSTAITISNN NMTHHNKVML LGHSDSYKAD KNMQVTIAFN HFGVGLGGRM PRCRFGYFHV VNNDYTNWQH YAIGGSSSPT
301: IFSQGNRFRA PNDEDHKEVT KHFKSSKSEW RKWNWRSEGD LMLNGAFFTA SGAGATARYD KASSMAARPP MLVVSMTAGA GALRCNKGNL CH
101: NPVNPKPGTL RHGVIQQEPL WIIFKHDMVI KLHKDLLVNS YKTIDGRGAT IHIAGGGPCI RVQKKTNIII HGIHIHDCKR GGVDIARSDG DGITIFGGSH
201: VWVDHCSLSN CFDGLIDVVH GSTAITISNN NMTHHNKVML LGHSDSYKAD KNMQVTIAFN HFGVGLGGRM PRCRFGYFHV VNNDYTNWQH YAIGGSSSPT
301: IFSQGNRFRA PNDEDHKEVT KHFKSSKSEW RKWNWRSEGD LMLNGAFFTA SGAGATARYD KASSMAARPP MLVVSMTAGA GALRCNKGNL CH
001: MRMTLVHLSL SLFSCLLLVL SPTFIASTPV SEPELVVQEV NEKINASRRN LGVLSCGTGN PIDDCWRCDP KWEKNRQRLA DCAIGFGKHA IGGRDGKIYV
101: VTDSSDKDVV NPKPGTLRHA VIQDEPLWII FARDMVIKLK EELIMNSFKT IDGRGASVHI AGGACITVQY VTNIIIHGVN IHDCKRKGNA YVRDSPSHYG
201: WRTASDGDAV SIFGGSHVWV DHCSLSNCAD GLIDAIHGST AITISNNYLS HHNKVMLLGH SDSYTRDKNM QVTIAFNHFG EGLVQRMPRC RHGYFHVVNN
301: DYTHWQMYAI GGSAAPTINS QGNRFLAPND HVFKEVTKYE DAPRSKWKKW NWRSEGDLFL NGAFFTPSGG GASSSYAKAS SLSARPSSLV ASVTSNAGAL
401: FCRKGSRC
101: VTDSSDKDVV NPKPGTLRHA VIQDEPLWII FARDMVIKLK EELIMNSFKT IDGRGASVHI AGGACITVQY VTNIIIHGVN IHDCKRKGNA YVRDSPSHYG
201: WRTASDGDAV SIFGGSHVWV DHCSLSNCAD GLIDAIHGST AITISNNYLS HHNKVMLLGH SDSYTRDKNM QVTIAFNHFG EGLVQRMPRC RHGYFHVVNN
301: DYTHWQMYAI GGSAAPTINS QGNRFLAPND HVFKEVTKYE DAPRSKWKKW NWRSEGDLFL NGAFFTPSGG GASSSYAKAS SLSARPSSLV ASVTSNAGAL
401: FCRKGSRC
Arabidopsis Description
Probable pectate lyase 5 [Source:UniProtKB/Swiss-Prot;Acc:Q9FXD8]
SUBAcon: [endoplasmic reticulum,vacuole]
SUBAcon: [endoplasmic reticulum,vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.