Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- extracellular 7
- endoplasmic reticulum 6
- vacuole 6
- plasma membrane 5
- golgi 5
- nucleus 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
nucleus:
21132161
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH46795 | Soybean | nucleus | 97.34 | 97.34 |
| VIT_07s0005g05520.t01 | Wine grape | endoplasmic reticulum, extracellular, vacuole | 80.27 | 81.35 |
| KRG90246 | Soybean | nucleus | 76.05 | 76.56 |
| KRH33474 | Soybean | nucleus | 75.61 | 75.78 |
| KRH57176 | Soybean | nucleus | 64.75 | 71.92 |
| KRH63675 | Soybean | endoplasmic reticulum, extracellular, vacuole | 64.97 | 71.81 |
| KRG97506 | Soybean | endoplasmic reticulum, golgi | 64.3 | 71.6 |
| KRH54276 | Soybean | endoplasmic reticulum, golgi, vacuole | 64.75 | 71.57 |
| KRH03893 | Soybean | nucleus | 64.3 | 71.43 |
| KRH31375 | Soybean | nucleus | 63.19 | 70.9 |
| KRH58231 | Soybean | extracellular | 61.64 | 68.81 |
| KRG93976 | Soybean | extracellular | 61.2 | 68.32 |
| KRG97507 | Soybean | endoplasmic reticulum, extracellular | 54.99 | 63.27 |
| KRH31373 | Soybean | extracellular | 50.55 | 61.46 |
| KRH11474 | Soybean | extracellular | 47.45 | 57.37 |
| KRH54508 | Soybean | extracellular | 40.35 | 54.65 |
| KRH67761 | Soybean | endoplasmic reticulum, extracellular, vacuole | 55.65 | 53.4 |
| KRH02031 | Soybean | extracellular | 46.78 | 53.02 |
| KRH36487 | Soybean | extracellular | 33.04 | 52.28 |
| KRH19954 | Soybean | endoplasmic reticulum, extracellular, plasma membrane | 54.99 | 51.99 |
| KRH63402 | Soybean | extracellular | 50.11 | 51.95 |
| KRH36488 | Soybean | extracellular | 45.68 | 51.89 |
| KRH45851 | Soybean | extracellular | 50.55 | 50.55 |
| KRH18498 | Soybean | endoplasmic reticulum, extracellular, vacuole | 49.0 | 49.89 |
| KRH74782 | Soybean | extracellular | 49.45 | 49.78 |
| KRH69345 | Soybean | extracellular | 49.22 | 49.66 |
| KRG93502 | Soybean | extracellular | 47.89 | 48.76 |
| KRG90767 | Soybean | extracellular | 52.99 | 47.61 |
| KRH01130 | Soybean | extracellular | 46.12 | 47.27 |
| KRH35994 | Soybean | extracellular | 52.33 | 46.83 |
Protein Annotations
| KEGG:00040+4.2.2.2 | EntrezGene:100809277 | Gene3D:2.160.20.10 | MapMan:21.3.5.2 | EMBL:ACUP02011319 | InterPro:AmbAllergen |
| EnsemblPlantsGene:GLYMA_18G175300 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005975 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009056 | GO:GO:0009987 | GO:GO:0016829 | GO:GO:0030570 | GO:GO:0045490 |
| GO:GO:0046872 | UniProt:I1N2D3 | InterPro:IPR012334 | EnsemblPlants:KRG99852 | ProteinID:KRG99852 | ProteinID:KRG99852.1 |
| PFAM:PF00544 | PRINTS:PR00807 | PANTHER:PTHR31683 | PANTHER:PTHR31683:SF34 | InterPro:Pec_lyase | InterPro:Pectin_lyas_fold |
| InterPro:Pectin_lyase_fold/virulence | SMART:SM00656 | SUPFAM:SSF51126 | SignalP:SignalP-noTM | UniParc:UPI00023DA05C | SEG:seg |
Description
hypothetical protein
Coordinates
chr18:+:41509717..41516615
Molecular Weight (calculated)
49569.8 Da
IEP (calculated)
8.407
GRAVY (calculated)
-0.249
Length
451 amino acids
Sequence
(BLAST)
(BLAST)
001: MKVLSPKLFT LSILLAALVL ASANAVSGNE MQKHEATESR DVVEEEKLQV QSLKNSSMAE RSGSALNEHA VDNPEEIASM VDESIRNYTA RRNLNFFSCG
101: SGNPIDDCWR CDKRWYARRK RLANCGIGFG RNAIGGRDGR YYVVSDPGDD DPVNPKPGTL RHAVIQDRPL WIVFKRDMVI TLKQELIMNS FKTIDGRGVN
201: VHIAYGACIT IQFVTNVIIH GLHIHDCKVT GNAMVRSSPS HYGWRTLADG DGISIFGSSH IWIDHNSLSN CADGLVDAVM GSTAITISNN YFTHHNEVML
301: LGHSDSYVRD KQMQVTIAYN HFGEGLIQRM PRCRHGYFHV VNNDYTHWVM YAIGGSANPT INSQGNRYLA PLNPFAKEVT KRVDTGSSVW KSWNWRSEGD
401: LLLNGAFFTS SGAGAAASYA RASSLGAKSS SLVGTITSGA GVLNCRRGAM C
101: SGNPIDDCWR CDKRWYARRK RLANCGIGFG RNAIGGRDGR YYVVSDPGDD DPVNPKPGTL RHAVIQDRPL WIVFKRDMVI TLKQELIMNS FKTIDGRGVN
201: VHIAYGACIT IQFVTNVIIH GLHIHDCKVT GNAMVRSSPS HYGWRTLADG DGISIFGSSH IWIDHNSLSN CADGLVDAVM GSTAITISNN YFTHHNEVML
301: LGHSDSYVRD KQMQVTIAYN HFGEGLIQRM PRCRHGYFHV VNNDYTHWVM YAIGGSANPT INSQGNRYLA PLNPFAKEVT KRVDTGSSVW KSWNWRSEGD
401: LLLNGAFFTS SGAGAAASYA RASSLGAKSS SLVGTITSGA GVLNCRRGAM C
001: MAVTKLILFA SALLLTALFI GVNASRSNET WHEHAVENPD EVAAMVDMSI RNSTERRRLG YFSCATGNPI DDCWRCDRKW QLRRKRLADC SIGFGRNAIG
101: GRDGRFYVVT DPGDDDPVNP IPGTLRHAVI QDEPLWIIFK RDMVITLKQE LIMNSFKTID GRGVNVHIAN GACLTIQYVT NIIVHGIHVH DCKPTGNAMV
201: RSSPSHYGFR SMADGDAISI FGSSHIWIDH NSLSNCADGL VDAVMSSTAI TVSNNFFTHH NEVMLLGHSD SYTRDKVMQV TIAYNHFGEG LIQRMPRCRH
301: GYFHVVNNDY THWEMYAIGG SAGPTINSQG NRFLAPVNPF AKEVTKREYT GESKWKHWNW RSEGDLFLNG AFFTRSGAGA GANYARASSL SAKSSSLVGT
401: MTSYSGALNC RAGRRC
101: GRDGRFYVVT DPGDDDPVNP IPGTLRHAVI QDEPLWIIFK RDMVITLKQE LIMNSFKTID GRGVNVHIAN GACLTIQYVT NIIVHGIHVH DCKPTGNAMV
201: RSSPSHYGFR SMADGDAISI FGSSHIWIDH NSLSNCADGL VDAVMSSTAI TVSNNFFTHH NEVMLLGHSD SYTRDKVMQV TIAYNHFGEG LIQRMPRCRH
301: GYFHVVNNDY THWEMYAIGG SAGPTINSQG NRFLAPVNPF AKEVTKREYT GESKWKHWNW RSEGDLFLNG AFFTRSGAGA GANYARASSL SAKSSSLVGT
401: MTSYSGALNC RAGRRC
Arabidopsis Description
Probable pectate lyase 8 [Source:UniProtKB/Swiss-Prot;Acc:Q9M8Z8]
SUBAcon: [endoplasmic reticulum,extracellular,vacuole]
SUBAcon: [endoplasmic reticulum,extracellular,vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.