Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, golgi
Predictor Summary:
Predictor Summary:
- extracellular 6
- endoplasmic reticulum 6
- vacuole 6
- plasma membrane 6
- golgi 6
- plastid 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH31375 | Soybean | nucleus | 96.3 | 97.01 |
| CDY18330 | Canola | cytosol | 30.37 | 84.25 |
| CDY70583 | Canola | cytosol | 48.4 | 80.66 |
| KRH57176 | Soybean | nucleus | 80.74 | 80.54 |
| KRH03893 | Soybean | nucleus | 80.49 | 80.3 |
| AT1G67750.1 | Thale cress | endoplasmic reticulum, vacuole | 80.74 | 80.15 |
| Bra004073.1-P | Field mustard | extracellular | 80.49 | 80.1 |
| CDY56520 | Canola | extracellular | 80.49 | 80.1 |
| CDY28857 | Canola | extracellular | 80.49 | 80.1 |
| CDY56220 | Canola | endoplasmic reticulum, extracellular, vacuole | 79.75 | 79.56 |
| CDY12666 | Canola | extracellular | 79.75 | 79.56 |
| Bra033980.1-P | Field mustard | extracellular | 79.51 | 79.31 |
| CDY32557 | Canola | extracellular | 79.51 | 79.31 |
| Bra004254.1-P | Field mustard | endoplasmic reticulum, extracellular, vacuole | 79.26 | 79.06 |
| CDY01846 | Canola | endoplasmic reticulum, extracellular, vacuole | 79.01 | 78.82 |
| KRH63675 | Soybean | endoplasmic reticulum, extracellular, vacuole | 78.27 | 77.7 |
| KRH54276 | Soybean | endoplasmic reticulum, golgi, vacuole | 77.28 | 76.72 |
| KRH58231 | Soybean | extracellular | 75.31 | 75.5 |
| KRG93976 | Soybean | extracellular | 74.81 | 75.0 |
| KRG97507 | Soybean | endoplasmic reticulum, extracellular | 71.11 | 73.47 |
| KRH31373 | Soybean | extracellular | 65.43 | 71.43 |
| KRG90246 | Soybean | nucleus | 71.36 | 64.51 |
| KRG99852 | Soybean | nucleus | 71.6 | 64.3 |
| KRH46795 | Soybean | nucleus | 71.36 | 64.08 |
| KRH33474 | Soybean | nucleus | 70.37 | 63.33 |
| KRH11474 | Soybean | extracellular | 52.84 | 57.37 |
| KRH36488 | Soybean | extracellular | 54.07 | 55.16 |
| KRH02031 | Soybean | extracellular | 53.58 | 54.52 |
| KRH54508 | Soybean | extracellular | 44.2 | 53.75 |
| KRH36487 | Soybean | extracellular | 37.53 | 53.33 |
| KRH63402 | Soybean | extracellular | 56.79 | 52.87 |
| KRH67761 | Soybean | endoplasmic reticulum, extracellular, vacuole | 60.25 | 51.91 |
| KRH19954 | Soybean | endoplasmic reticulum, extracellular, plasma membrane | 59.75 | 50.73 |
| KRH74782 | Soybean | extracellular | 55.56 | 50.22 |
| KRH45851 | Soybean | extracellular | 55.06 | 49.45 |
| KRH69345 | Soybean | extracellular | 53.83 | 48.77 |
| KRH01130 | Soybean | extracellular | 52.35 | 48.18 |
| KRG93502 | Soybean | extracellular | 52.59 | 48.08 |
| KRH18498 | Soybean | endoplasmic reticulum, extracellular, vacuole | 51.85 | 47.4 |
| KRG90767 | Soybean | extracellular | 58.27 | 47.01 |
| KRH35994 | Soybean | extracellular | 58.27 | 46.83 |
Protein Annotations
| KEGG:00040+4.2.2.2 | EntrezGene:100782388 | Gene3D:2.160.20.10 | MapMan:21.3.5.2 | EMBL:ACUP02010799 | InterPro:AmbAllergen |
| EnsemblPlantsGene:GLYMA_18G012200 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005975 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009056 | GO:GO:0009987 | GO:GO:0016829 | GO:GO:0030570 | GO:GO:0045490 |
| GO:GO:0046872 | UniProt:I1MYL5 | InterPro:IPR012334 | EnsemblPlants:KRG97506 | ProteinID:KRG97506 | ProteinID:KRG97506.1 |
| PFAM:PF00544 | PRINTS:PR00807 | PANTHER:PTHR31683 | PANTHER:PTHR31683:SF26 | InterPro:Pec_lyase | InterPro:Pectin_lyas_fold |
| InterPro:Pectin_lyase_fold/virulence | SMART:SM00656 | SUPFAM:SSF51126 | SignalP:SignalP-noTM | UniParc:UPI000233E56F | SEG:seg |
Description
hypothetical protein
Coordinates
chr18:+:858069..860478
Molecular Weight (calculated)
44705.4 Da
IEP (calculated)
8.744
GRAVY (calculated)
-0.283
Length
405 amino acids
Sequence
(BLAST)
(BLAST)
001: MEIPIPIPLS SMLLFLLLVP CCICSSPLQD PELVVEDVQK SINASRRNLA FLSCGTGNPI DDCWRCDPNW EKNRKRLADC SIGFGKHAVG GRDGKLYVVT
101: DPGDHPVNPK PGTLRYGVIQ EEPLWIIFKR DMVIKLKQEL MMNSFKTIDG RGVSVHIAGG PCITIQYVTN IIIHGINIHD CKQGGNAYVR DSPTHYGWRT
201: LSDGDGVSIF GGSHVWVDHC SLSNCRDGLI DAIHGSTAIT ISNNYMTHHN KVMLLGHSDT FTRDKNMQVT IAFNHFGEGL VQRMPRCRHG YFHVVNNDYT
301: HWRMYAIGGS AAPTINSQGN RFLAPNDNTF KEVTKRENSP QSKWKNWNWR SNGDLMLNGA FFTASGAGAS SSYARASSLA AKSSSLVSSI TASAGSLRCR
401: KGSRC
101: DPGDHPVNPK PGTLRYGVIQ EEPLWIIFKR DMVIKLKQEL MMNSFKTIDG RGVSVHIAGG PCITIQYVTN IIIHGINIHD CKQGGNAYVR DSPTHYGWRT
201: LSDGDGVSIF GGSHVWVDHC SLSNCRDGLI DAIHGSTAIT ISNNYMTHHN KVMLLGHSDT FTRDKNMQVT IAFNHFGEGL VQRMPRCRHG YFHVVNNDYT
301: HWRMYAIGGS AAPTINSQGN RFLAPNDNTF KEVTKRENSP QSKWKNWNWR SNGDLMLNGA FFTASGAGAS SSYARASSLA AKSSSLVSSI TASAGSLRCR
401: KGSRC
001: MRMTLVHLSL SLFSCLLLVL SPTFIASTPV SEPELVVQEV NEKINASRRN LGVLSCGTGN PIDDCWRCDP KWEKNRQRLA DCAIGFGKHA IGGRDGKIYV
101: VTDSSDKDVV NPKPGTLRHA VIQDEPLWII FARDMVIKLK EELIMNSFKT IDGRGASVHI AGGACITVQY VTNIIIHGVN IHDCKRKGNA YVRDSPSHYG
201: WRTASDGDAV SIFGGSHVWV DHCSLSNCAD GLIDAIHGST AITISNNYLS HHNKVMLLGH SDSYTRDKNM QVTIAFNHFG EGLVQRMPRC RHGYFHVVNN
301: DYTHWQMYAI GGSAAPTINS QGNRFLAPND HVFKEVTKYE DAPRSKWKKW NWRSEGDLFL NGAFFTPSGG GASSSYAKAS SLSARPSSLV ASVTSNAGAL
401: FCRKGSRC
101: VTDSSDKDVV NPKPGTLRHA VIQDEPLWII FARDMVIKLK EELIMNSFKT IDGRGASVHI AGGACITVQY VTNIIIHGVN IHDCKRKGNA YVRDSPSHYG
201: WRTASDGDAV SIFGGSHVWV DHCSLSNCAD GLIDAIHGST AITISNNYLS HHNKVMLLGH SDSYTRDKNM QVTIAFNHFG EGLVQRMPRC RHGYFHVVNN
301: DYTHWQMYAI GGSAAPTINS QGNRFLAPND HVFKEVTKYE DAPRSKWKKW NWRSEGDLFL NGAFFTPSGG GASSSYAKAS SLSARPSSLV ASVTSNAGAL
401: FCRKGSRC
Arabidopsis Description
Probable pectate lyase 5 [Source:UniProtKB/Swiss-Prot;Acc:Q9FXD8]
SUBAcon: [endoplasmic reticulum,vacuole]
SUBAcon: [endoplasmic reticulum,vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.