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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular

Predictor Summary:
  • extracellular 7
  • endoplasmic reticulum 6
  • vacuole 5
  • plasma membrane 5
  • golgi 5
Predictors GFP MS/MS Papers
Winner Takes All:extracellular
Any Predictor:secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:endoplasmic reticulum
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:extracellular
YLoc:extracellular
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY56520 Canola extracellular 98.53 98.53
CDY18330 Canola cytosol 34.89 97.26
CDY56220 Canola endoplasmic reticulum, extracellular, vacuole 93.61 93.84
CDY12666 Canola extracellular 93.37 93.6
CDY32557 Canola extracellular 93.12 93.35
CDY01846 Canola endoplasmic reticulum, extracellular, vacuole 92.87 93.1
AT1G67750.1 Thale cress endoplasmic reticulum, vacuole 92.87 92.65
CDY70583 Canola cytosol 54.05 90.53
KRH31375 Soybean nucleus 80.59 81.59
KRG97506 Soybean endoplasmic reticulum, golgi 80.1 80.49
CDY08948 Canola endoplasmic reticulum, extracellular 78.38 78.57
CDY34310 Canola endoplasmic reticulum, vacuole 78.38 78.57
CDY03419 Canola endoplasmic reticulum, extracellular 78.38 78.57
CDY24847 Canola endoplasmic reticulum, extracellular 78.13 78.33
CDY11033 Canola endoplasmic reticulum, extracellular 77.15 77.34
CDX92652 Canola endoplasmic reticulum, extracellular 77.15 77.34
CDY41506 Canola endoplasmic reticulum, extracellular, vacuole 76.9 75.79
CDY48132 Canola endoplasmic reticulum, golgi 77.15 73.36
CDY16732 Canola endoplasmic reticulum, golgi 76.66 72.9
CDY03964 Canola extracellular 71.99 71.12
CDX83690 Canola endoplasmic reticulum, extracellular, vacuole 71.99 71.12
CDY20049 Canola plastid, vacuole 71.01 70.15
CDY00156 Canola extracellular, plastid 71.01 70.15
CDY34149 Canola extracellular 61.18 69.36
CDY65626 Canola golgi 77.15 69.16
CDY24654 Canola endoplasmic reticulum, extracellular, vacuole 69.29 67.79
CDY05305 Canola endoplasmic reticulum, extracellular, vacuole 69.29 67.79
CDY33938 Canola extracellular 68.3 66.67
CDY05655 Canola extracellular 68.3 66.67
CDY19932 Canola extracellular 68.3 66.51
CDY56668 Canola extracellular 68.06 66.27
CDY46471 Canola endoplasmic reticulum, extracellular 70.76 65.6
CDY01119 Canola endoplasmic reticulum, extracellular 68.3 63.91
CDY47327 Canola endoplasmic reticulum, extracellular 67.81 63.74
CDX89799 Canola extracellular 66.83 63.11
CDY15517 Canola endoplasmic reticulum, extracellular, golgi 66.58 62.88
CDY61137 Canola extracellular 66.58 62.88
CDX86615 Canola endoplasmic reticulum, extracellular, golgi 66.58 62.88
CDY01151 Canola endoplasmic reticulum, extracellular, vacuole 68.3 61.5
CDY53564 Canola endoplasmic reticulum, extracellular, vacuole 68.55 61.32
CDY18738 Canola endoplasmic reticulum, extracellular 69.29 59.24
CDX77400 Canola endoplasmic reticulum, extracellular 70.27 58.13
CDY66697 Canola endoplasmic reticulum, golgi 63.15 57.49
CDX77470 Canola golgi, plasma membrane 63.64 56.43
CDY06557 Canola extracellular 53.07 55.81
CDX98092 Canola extracellular 48.65 55.62
CDY20748 Canola extracellular 52.83 55.41
CDY30040 Canola extracellular 48.4 55.34
CDX98091 Canola extracellular 50.12 54.99
CDX82902 Canola endoplasmic reticulum, extracellular, vacuole 43.73 54.43
CDY30041 Canola extracellular 49.39 54.18
CDX70244 Canola vacuole 55.53 51.25
CDY27438 Canola extracellular 50.86 50.74
CDX79122 Canola extracellular 49.63 50.37
CDX76388 Canola extracellular 50.37 50.25
CDX78152 Canola extracellular 58.48 50.0
CDX73573 Canola extracellular 58.23 49.79
CDX67560 Canola plasma membrane 58.97 48.98
CDY07515 Canola endoplasmic reticulum, extracellular, vacuole 58.97 48.78
CDX67615 Canola endoplasmic reticulum, extracellular, vacuole 58.72 48.68
CDY56964 Canola endoplasmic reticulum, extracellular, vacuole 57.74 47.76
CDY11284 Canola extracellular, golgi 58.72 46.86
CDY28691 Canola endoplasmic reticulum, extracellular, vacuole 53.32 46.27
CDY41679 Canola endoplasmic reticulum, plasma membrane 51.84 46.17
CDX85564 Canola extracellular 53.56 46.09
CDX91953 Canola endoplasmic reticulum, extracellular 53.32 46.07
CDX74293 Canola endoplasmic reticulum, extracellular 53.32 46.07
CDX70590 Canola endoplasmic reticulum, extracellular 53.56 45.89
CDY04133 Canola extracellular 51.6 45.75
CDY17432 Canola extracellular 51.6 45.75
CDY09356 Canola extracellular 51.35 45.73
CDY63769 Canola extracellular 53.81 45.72
CDX78607 Canola endoplasmic reticulum, extracellular 53.32 45.68
CDY68729 Canola endoplasmic reticulum, extracellular, plasma membrane 51.35 45.63
CDX96854 Canola endoplasmic reticulum, extracellular, plasma membrane 51.35 45.63
CDY58428 Canola endoplasmic reticulum, golgi, plastid 57.49 45.44
CDX73426 Canola endoplasmic reticulum, extracellular, vacuole 57.49 45.26
CDY45254 Canola endoplasmic reticulum 50.86 45.2
CDY03043 Canola extracellular 50.86 45.1
CDY39314 Canola extracellular 50.61 44.88
CDY45202 Canola extracellular 50.37 44.66
CDY41382 Canola endoplasmic reticulum, golgi 57.49 44.4
CDX81636 Canola endoplasmic reticulum 52.33 44.01
CDY13312 Canola plasma membrane 57.49 43.66
CDY66593 Canola endoplasmic reticulum, extracellular 53.32 43.49
CDX69550 Canola endoplasmic reticulum, extracellular 53.32 43.49
CDY53552 Canola extracellular 52.58 43.23
CDY70492 Canola endoplasmic reticulum, extracellular 0.98 7.27
CDY53553 Canola mitochondrion, nucleus 0.74 1.97
CDX96858 Canola mitochondrion, nucleus 0.74 1.97
CDX81635 Canola mitochondrion, nucleus 0.74 1.97
CDY45253 Canola mitochondrion, nucleus 0.74 1.97
CDY66531 Canola mitochondrion, nucleus 0.74 1.97
CDY09355 Canola mitochondrion, nucleus 0.74 1.97
CDY45199 Canola mitochondrion, nucleus 0.74 1.97
CDY41678 Canola mitochondrion, nucleus 0.74 1.97
CDY04136 Canola mitochondrion, nucleus 0.74 1.97
Protein Annotations
KEGG:00040+4.2.2.2Gene3D:2.160.20.10MapMan:21.3.5.2GO:A0A078GUT3UniProt:A0A078GUT3InterPro:AmbAllergen
EnsemblPlants:CDY28857ProteinID:CDY28857ProteinID:CDY28857.1GO:GO:0003674GO:GO:0003824GO:GO:0005488
GO:GO:0005975GO:GO:0008150GO:GO:0008152GO:GO:0009056GO:GO:0009987GO:GO:0016829
GO:GO:0030570GO:GO:0045490GO:GO:0046872EnsemblPlantsGene:GSBRNA2T00041530001InterPro:IPR012334PFAM:PF00544
PRINTS:PR00807PANTHER:PTHR31683PANTHER:PTHR31683:SF28InterPro:Pec_lyaseInterPro:Pectin_lyas_foldInterPro:Pectin_lyase_fold/virulence
SMART:SM00656SUPFAM:SSF51126SignalP:SignalP-noTMTMHMM:TMhelixUniPathway:UPA00545UniParc:UPI0004EDFE67
SEG:seg:::::
Description
BnaC06g26450DPectate lyase [Source:UniProtKB/TrEMBL;Acc:A0A078GUT3]
Coordinates
chrLK032227:-:189057..190935
Molecular Weight (calculated)
44915.1 Da
IEP (calculated)
8.307
GRAVY (calculated)
-0.296
Length
407 amino acids
Sequence
(BLAST)
001: MILLHQLYLS LFSCLFLVLA PTFTASSHVS DPELVVQEVN EKINASRRNL GVLSCGTGNP IDDCWRCDPK WEKNRQRLAD CAIGFGKHAI GGRDGRIYVV
101: TDSSDNDAVN PKPGTLRHAV IQDEPLWIIF ARDMVIKLKE ELMMNSFKTI DGRGASVHIA GGACITVQYV TNIIIHGINI HDCKKRGNAY VRDSPSHYGW
201: RTASDGDAVS IFGGSHVWVD HCSLSNCDDG LVDAIRGSTA ITISNNYLTH HNKVMLLGHS DSYTRDKNMQ VTIAFNHFGE GLVQRMPRCR HGYFHVVNND
301: YTHWQMYAIG GSAAPTINSQ GNRFLAPNDH VFKEVTKYED APQSKWKNWN WRSEGDLFLN GAFFTPSGGR SSSSYAKASS LSARPSSVVA SVTGNAGSLS
401: CRKGSRC
Best Arabidopsis Sequence Match ( AT1G67750.1 )
(BLAST)
001: MRMTLVHLSL SLFSCLLLVL SPTFIASTPV SEPELVVQEV NEKINASRRN LGVLSCGTGN PIDDCWRCDP KWEKNRQRLA DCAIGFGKHA IGGRDGKIYV
101: VTDSSDKDVV NPKPGTLRHA VIQDEPLWII FARDMVIKLK EELIMNSFKT IDGRGASVHI AGGACITVQY VTNIIIHGVN IHDCKRKGNA YVRDSPSHYG
201: WRTASDGDAV SIFGGSHVWV DHCSLSNCAD GLIDAIHGST AITISNNYLS HHNKVMLLGH SDSYTRDKNM QVTIAFNHFG EGLVQRMPRC RHGYFHVVNN
301: DYTHWQMYAI GGSAAPTINS QGNRFLAPND HVFKEVTKYE DAPRSKWKKW NWRSEGDLFL NGAFFTPSGG GASSSYAKAS SLSARPSSLV ASVTSNAGAL
401: FCRKGSRC
Arabidopsis Description
Probable pectate lyase 5 [Source:UniProtKB/Swiss-Prot;Acc:Q9FXD8]
SUBAcon: [endoplasmic reticulum,vacuole]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.