Skip to main content
crop-pal logo
Canola
Search for another protein from :
Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: golgi, extracellular

Predictor Summary:
  • plastid 2
  • extracellular 3
  • endoplasmic reticulum 2
  • vacuole 2
  • plasma membrane 2
  • golgi 3
  • mitochondrion 2
Predictors GFP MS/MS Papers
Winner Takes All:extracellular, golgi
Any Predictor:mitochondrion, plastid, secretory
BaCelLo:plastid
iPSORT:secretory
MultiLoc:extracellular
Predotar:secretory
PProwler:mitochondrion
TargetP:mitochondrion
WoLF PSORT:plastid
YLoc:golgi
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra005799.1-P Field mustard extracellular, golgi 98.43 98.05
CDY58428 Canola endoplasmic reticulum, golgi, plastid 97.84 96.89
AT5G04310.1 Thale cress plasma membrane 89.8 88.42
CDX70244 Canola vacuole 75.88 87.76
CDY41382 Canola endoplasmic reticulum, golgi 89.41 86.53
HORVU5Hr1G005000.2 Barley cytosol 43.53 65.1
CDY18330 Canola cytosol 18.63 65.07
VIT_13s0019g04910.t01 Wine grape extracellular 62.94 64.72
Solyc11g008140.1.1 Tomato plasma membrane 56.67 64.37
KRG90767 Soybean extracellular 62.35 63.35
KRH35994 Soybean extracellular 61.57 62.3
PGSC0003DMT400079776 Potato plasma membrane 59.61 62.04
CDY07515 Canola endoplasmic reticulum, extracellular, vacuole 59.41 61.59
CDX67615 Canola endoplasmic reticulum, extracellular, vacuole 58.82 61.1
PGSC0003DMT400011046 Potato mitochondrion 34.71 60.82
CDY56964 Canola endoplasmic reticulum, extracellular, vacuole 57.84 59.96
CDY34310 Canola endoplasmic reticulum, vacuole 47.25 59.36
CDX92652 Canola endoplasmic reticulum, extracellular 47.06 59.11
CDY11033 Canola endoplasmic reticulum, extracellular 47.06 59.11
CDY03419 Canola endoplasmic reticulum, extracellular 46.86 58.87
CDY08948 Canola endoplasmic reticulum, extracellular 46.86 58.87
CDY24847 Canola endoplasmic reticulum, extracellular 46.86 58.87
Solyc03g071570.2.1 Tomato endoplasmic reticulum, plasma membrane, vacuole 58.04 58.73
CDY28857 Canola extracellular 46.86 58.72
Solyc05g055510.2.1 Tomato plasma membrane 56.86 58.7
CDY56220 Canola endoplasmic reticulum, extracellular, vacuole 46.67 58.62
CDY56520 Canola extracellular 46.47 58.23
CDY01846 Canola endoplasmic reticulum, extracellular, vacuole 46.27 58.13
CDY12666 Canola extracellular 45.88 57.64
CDY32557 Canola extracellular 45.88 57.64
CDY41506 Canola endoplasmic reticulum, extracellular, vacuole 46.67 57.63
CDX73426 Canola endoplasmic reticulum, extracellular, vacuole 58.24 57.45
CDY56668 Canola extracellular 46.86 57.18
CDY19932 Canola extracellular 46.67 56.94
CDY05305 Canola endoplasmic reticulum, extracellular, vacuole 46.08 56.49
CDY70583 Canola cytosol 26.86 56.38
CDY24654 Canola endoplasmic reticulum, extracellular, vacuole 45.88 56.25
CDY05655 Canola extracellular 45.88 56.12
CDY33938 Canola extracellular 45.88 56.12
CDX83690 Canola endoplasmic reticulum, extracellular, vacuole 45.1 55.83
CDX78152 Canola extracellular 51.57 55.25
CDY16732 Canola endoplasmic reticulum, golgi 46.27 55.14
CDY48132 Canola endoplasmic reticulum, golgi 46.27 55.14
CDX73573 Canola extracellular 51.37 55.04
CDY15517 Canola endoplasmic reticulum, extracellular, golgi 46.47 54.99
CDY00156 Canola extracellular, plastid 44.12 54.61
CDX86615 Canola endoplasmic reticulum, extracellular, golgi 46.08 54.52
CDY01119 Canola endoplasmic reticulum, extracellular 46.47 54.48
CDY20049 Canola plastid, vacuole 43.92 54.37
CDY03964 Canola extracellular 43.73 54.13
CDX89799 Canola extracellular 45.69 54.06
CDY47327 Canola endoplasmic reticulum, extracellular 45.88 54.04
CDX67560 Canola plasma membrane 51.76 53.88
CDY61137 Canola extracellular 45.49 53.83
CDY46471 Canola endoplasmic reticulum, extracellular 46.27 53.76
CDY34149 Canola extracellular 37.65 53.48
CDY65626 Canola golgi 47.06 52.86
CDY01151 Canola endoplasmic reticulum, extracellular, vacuole 46.67 52.65
CDX82902 Canola endoplasmic reticulum, extracellular, vacuole 33.73 52.6
CDY53564 Canola endoplasmic reticulum, extracellular, vacuole 46.67 52.31
CDY66697 Canola endoplasmic reticulum, golgi 45.1 51.45
CDY06557 Canola extracellular 39.02 51.42
CDX98092 Canola extracellular 35.88 51.4
CDY30040 Canola extracellular 35.88 51.4
CDY20748 Canola extracellular 39.02 51.29
CDY18738 Canola endoplasmic reticulum, extracellular 47.65 51.05
CDX98091 Canola extracellular 37.06 50.94
PGSC0003DMT400060374 Potato extracellular, plasma membrane, vacuole 56.86 50.79
CDX77470 Canola golgi, plasma membrane 45.49 50.54
CDY30041 Canola extracellular 36.47 50.13
CDX79122 Canola extracellular 38.24 48.63
CDX77400 Canola endoplasmic reticulum, extracellular 46.67 48.37
CDY13312 Canola plasma membrane 50.78 48.32
CDY27438 Canola extracellular 38.24 47.79
CDX76388 Canola extracellular 38.04 47.55
CDY68729 Canola endoplasmic reticulum, extracellular, plasma membrane 38.24 42.58
CDX96854 Canola endoplasmic reticulum, extracellular, plasma membrane 37.84 42.14
CDY45254 Canola endoplasmic reticulum 37.84 42.14
CDY17432 Canola extracellular 37.84 42.05
CDY39314 Canola extracellular 37.84 42.05
CDY04133 Canola extracellular 37.65 41.83
CDY45202 Canola extracellular 37.65 41.83
CDY03043 Canola extracellular 37.06 41.18
CDY28691 Canola endoplasmic reticulum, extracellular, vacuole 37.84 41.15
CDX70590 Canola endoplasmic reticulum, extracellular 38.04 40.84
CDX78607 Canola endoplasmic reticulum, extracellular 38.04 40.84
CDX85564 Canola extracellular 37.84 40.8
CDY63769 Canola extracellular 38.24 40.71
CDX74293 Canola endoplasmic reticulum, extracellular 37.45 40.55
CDX91953 Canola endoplasmic reticulum, extracellular 37.45 40.55
CDX81636 Canola endoplasmic reticulum 38.24 40.29
CDY09356 Canola extracellular 36.08 40.26
CDY41679 Canola endoplasmic reticulum, plasma membrane 36.08 40.26
CDY53552 Canola extracellular 38.63 39.8
CDX69550 Canola endoplasmic reticulum, extracellular 38.43 39.28
CDY66593 Canola endoplasmic reticulum, extracellular 38.43 39.28
CDY70492 Canola endoplasmic reticulum, extracellular 0.78 7.27
CDX81635 Canola mitochondrion, nucleus 1.96 6.58
CDX96858 Canola mitochondrion, nucleus 1.96 6.58
CDY45253 Canola mitochondrion, nucleus 1.96 6.58
CDY53553 Canola mitochondrion, nucleus 1.96 6.58
CDY66531 Canola mitochondrion, nucleus 1.96 6.58
CDY04136 Canola mitochondrion, nucleus 1.76 5.92
CDY09355 Canola mitochondrion, nucleus 1.76 5.92
CDY41678 Canola mitochondrion, nucleus 1.76 5.92
CDY45199 Canola mitochondrion, nucleus 1.76 5.92
Protein Annotations
KEGG:00040+4.2.2.2Gene3D:2.160.20.10MapMan:21.3.5.2GO:A0A078FEB1UniProt:A0A078FEB1InterPro:AmbAllergen
EnsemblPlants:CDY11284ProteinID:CDY11284ProteinID:CDY11284.1GO:GO:0003674GO:GO:0003824GO:GO:0005488
GO:GO:0005975GO:GO:0008150GO:GO:0008152GO:GO:0009056GO:GO:0009987GO:GO:0016829
GO:GO:0030570GO:GO:0045490GO:GO:0046872EnsemblPlantsGene:GSBRNA2T00049317001InterPro:IPR012334PFAM:PF00544
PRINTS:PR00807PANTHER:PTHR31683PANTHER:PTHR31683:SF11InterPro:Pec_lyaseInterPro:Pectin_lyas_foldInterPro:Pectin_lyase_fold/virulence
SMART:SM00656SUPFAM:SSF51126SignalP:SignalP-noTMTMHMM:TMhelixUniPathway:UPA00545UniParc:UPI0004EE155C
SEG:seg:::::
Description
BnaA03g01200DPectate lyase [Source:UniProtKB/TrEMBL;Acc:A0A078FEB1]
Coordinates
chrLK032010:-:566589..570749
Molecular Weight (calculated)
55378.3 Da
IEP (calculated)
7.434
GRAVY (calculated)
-0.224
Length
510 amino acids
Sequence
(BLAST)
001: MVAHKRVHLR PTCICIIWFC LLVSLPHHGR ASSFNLSLPH QHPFPEHVVL NVQRKLNDSL SRRNLLTYQQ DDATAASSPP IPSCLTGNPI DDCWRCDPNW
101: SQNRQRLADC SIGFGQGTLG GKGGRFYLVT DSSDNDAANP LPGTLRHAVI QPEPLWIIFS GDMGITLRHE LIVGSFKTID GRGTNVQITG HGCLTIQQVS
201: HVIIHNVHIH HCKPSGNTLV ASSPTHVGFR GVSDGDGISV SASHHIWVDH CSLGYCSDGL IDVILASTAV TVSNNYFHHH DEVMLLGHDD RYTADSGMQV
301: TIAFNHFGEG LVQRMPRCRH GYIHVVNNDF TAWEMYAIGG SANPTINSQG NRYTAPIDPN AKEVTKRVDS NEKHWGKWNW RTEGDVMVNG AFFVPSGDGV
401: SPAYARATSL QAKTADVIDQ LTVNAGVFGD PSGRNGQGGG FPGITGGGGT VTRGYSKGGP GGGSSDSDDG IFTMIFGSNS SAAAVALRPR QVWSIVFTII
501: LLWYFPHHRR
Best Arabidopsis Sequence Match ( AT5G04310.2 )
(BLAST)
001: MVAHERRIHN LQKPTCICII WFCLLVSLSH HGRASSTSAS IFNLSLPHQH PFPEHVVLNV QRKLNDSLSR RQLLTYQQDD GTTASSPIPS CITGNPIDDC
101: WRCDPNWSAN RQRLADCSIG FGQGTLGGKG GQFYLVTDSS DNDAANPIPG TLRHAVIQPE PLWIIFSSDM GIKLKHELII GSYKTIDGRG TNIQITGHGC
201: LTIQQVSHVI IHNVHIHHCK PSGNTLVASS PTHVGFRGVS DGDGISVSAS HHIWVDHCSL GYCADGLIDV ILASTAVTIS NNYFSHHDEV MLLGHDDRYT
301: ADKGMQVTIA FNHFGEGLVQ RMPRCRHGYI HVVNNDFTAW EMYAIGGSAS PTINSQGNRY TAPIDPNAKE VTKRVDSNEK HWSGWNWRTE GDVMVNGAFF
401: VPSGDGVSPA YARATSVQPK AAAIIDQLTV NAGVFGDPSG RNGQGGSFPG ITNGGGTITR GYSKSGPAGG GSGSDSDDGL FTLIFGNNSG AVALRPGQVW
501: SILLIIILYW YIPHHTRS
Arabidopsis Description
Pectate lyase [Source:UniProtKB/TrEMBL;Acc:F4JW80]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.