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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum, extracellular, vacuole

Predictor Summary:
  • plastid 2
  • extracellular 5
  • endoplasmic reticulum 5
  • vacuole 5
  • plasma membrane 4
  • golgi 4
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum, extracellular, vacuole
Any Predictor:plastid, secretory
BaCelLo:plastid
ChloroP:plastid
iPSORT:secretory
MultiLoc:endoplasmic reticulum
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:vacuole
YLoc:extracellular
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra032730.1-P Field mustard endoplasmic reticulum, extracellular, vacuole 99.11 99.33
CDY53564 Canola endoplasmic reticulum, extracellular, vacuole 97.79 97.14
CDY18738 Canola endoplasmic reticulum, extracellular 90.49 85.92
AT4G13710.1 Thale cress endoplasmic reticulum, extracellular, vacuole 88.72 85.32
HORVU2Hr1G002930.1 Barley cytosol 50.66 83.58
VIT_05s0051g00590.t01 Wine grape endoplasmic reticulum, extracellular, golgi 76.33 80.23
GSMUA_Achr11P... Banana cytosol, extracellular, vacuole 63.27 79.44
GSMUA_Achr8P12860_001 Banana cytosol 61.28 78.47
CDY15517 Canola endoplasmic reticulum, extracellular, golgi 73.89 77.49
GSMUA_Achr5P15620_001 Banana cytosol 59.96 77.21
CDY61137 Canola extracellular 73.23 76.8
KRG90246 Soybean nucleus 76.11 76.79
CDX86615 Canola endoplasmic reticulum, extracellular, golgi 73.01 76.57
CDX89799 Canola extracellular 72.79 76.33
KRH33474 Soybean nucleus 75.89 76.22
GSMUA_Achr4P26690_001 Banana extracellular 61.5 75.75
GSMUA_Achr11P... Banana extracellular 60.84 75.55
CDY24654 Canola endoplasmic reticulum, extracellular, vacuole 69.47 75.48
CDY05305 Canola endoplasmic reticulum, extracellular, vacuole 69.25 75.24
CDY66697 Canola endoplasmic reticulum, golgi 73.89 74.72
CDY05655 Canola extracellular 68.81 74.58
CDY33938 Canola extracellular 68.81 74.58
PGSC0003DMT400076251 Potato extracellular 73.89 74.55
CDY56668 Canola extracellular 68.81 74.4
Solyc09g091430.2.1 Tomato nucleus 74.11 74.28
CDY19932 Canola extracellular 68.58 74.16
CDY18330 Canola cytosol 23.67 73.29
CDX77470 Canola golgi, plasma membrane 74.11 72.98
CDY70492 Canola endoplasmic reticulum, extracellular 8.85 72.73
GSMUA_Achr7P04580_001 Banana endoplasmic reticulum, extracellular 71.68 72.48
GSMUA_Achr3P00290_001 Banana endoplasmic reticulum, extracellular, vacuole 65.49 72.02
CDY46471 Canola endoplasmic reticulum, extracellular 69.91 71.98
Zm00001d025067_P001 Maize mitochondrion 70.8 70.48
GSMUA_AchrUn_... Banana endoplasmic reticulum, golgi 70.58 70.26
CDY47327 Canola endoplasmic reticulum, extracellular 67.26 70.21
Zm00001d004448_P001 Maize endoplasmic reticulum 69.47 70.09
CDY01119 Canola endoplasmic reticulum, extracellular 67.26 69.89
CDY70583 Canola cytosol 37.17 69.14
CDY12666 Canola extracellular 61.95 68.97
CDY34310 Canola endoplasmic reticulum, vacuole 61.95 68.97
CDY03419 Canola endoplasmic reticulum, extracellular 61.73 68.72
CDY32557 Canola extracellular 61.73 68.72
CDY56520 Canola extracellular 61.73 68.55
CDY08948 Canola endoplasmic reticulum, extracellular 61.5 68.47
CDY56220 Canola endoplasmic reticulum, extracellular, vacuole 61.5 68.47
CDY28857 Canola extracellular 61.5 68.3
CDY01846 Canola endoplasmic reticulum, extracellular, vacuole 61.06 67.98
CDY11033 Canola endoplasmic reticulum, extracellular 61.06 67.98
CDY24847 Canola endoplasmic reticulum, extracellular 60.84 67.73
KXG25802 Sorghum plastid 72.35 67.56
CDX92652 Canola endoplasmic reticulum, extracellular 60.62 67.49
TraesCS2D01G018000.1 Wheat golgi 70.58 67.44
CDY41506 Canola endoplasmic reticulum, extracellular, vacuole 61.28 67.07
TraesCS2B01G024500.2 Wheat golgi 70.8 66.53
TraesCS2A01G016500.1 Wheat golgi 70.58 66.32
CDX83690 Canola endoplasmic reticulum, extracellular, vacuole 58.85 64.56
CDY16732 Canola endoplasmic reticulum, golgi 61.06 64.49
CDX77400 Canola endoplasmic reticulum, extracellular 70.13 64.43
CDY48132 Canola endoplasmic reticulum, golgi 60.84 64.25
CDY00156 Canola extracellular, plastid 58.19 63.84
CDY20049 Canola plastid, vacuole 57.96 63.59
CDY03964 Canola extracellular 57.3 62.86
CDY34149 Canola extracellular 49.12 61.84
HORVU2Hr1G002880.2 Barley mitochondrion 69.69 61.76
CDY65626 Canola golgi 61.06 60.79
CDY06557 Canola extracellular 47.79 55.81
CDY20748 Canola extracellular 47.79 55.67
CDX98092 Canola extracellular 42.26 53.65
CDY30040 Canola extracellular 42.04 53.37
CDX78152 Canola extracellular 55.97 53.15
CDX98091 Canola extracellular 43.58 53.1
CDX73573 Canola extracellular 55.75 52.94
CDX82902 Canola endoplasmic reticulum, extracellular, vacuole 38.27 52.91
CDY30041 Canola extracellular 43.36 52.83
CDX70244 Canola vacuole 51.33 52.61
CDX67560 Canola plasma membrane 56.19 51.84
CDX67615 Canola endoplasmic reticulum, extracellular, vacuole 54.42 50.1
CDY07515 Canola endoplasmic reticulum, extracellular, vacuole 54.42 50.0
CDY56964 Canola endoplasmic reticulum, extracellular, vacuole 53.54 49.19
CDY27438 Canola extracellular 44.03 48.77
CDX70590 Canola endoplasmic reticulum, extracellular 50.88 48.42
CDX78607 Canola endoplasmic reticulum, extracellular 50.88 48.42
CDX79122 Canola extracellular 42.7 48.13
CDX76388 Canola extracellular 43.36 48.04
CDY17432 Canola extracellular 48.23 47.49
CDY68729 Canola endoplasmic reticulum, extracellular, plasma membrane 47.79 47.16
CDX85564 Canola extracellular 49.34 47.15
CDY04133 Canola extracellular 47.79 47.06
CDX73426 Canola endoplasmic reticulum, extracellular, vacuole 53.54 46.81
CDY63769 Canola extracellular 49.56 46.76
CDX96854 Canola endoplasmic reticulum, extracellular, plasma membrane 47.35 46.72
CDY11284 Canola extracellular, golgi 52.65 46.67
CDY45202 Canola extracellular 47.35 46.62
CDY28691 Canola endoplasmic reticulum, extracellular, vacuole 48.23 46.48
CDX74293 Canola endoplasmic reticulum, extracellular 48.23 46.28
CDX91953 Canola endoplasmic reticulum, extracellular 48.23 46.28
CDY13312 Canola plasma membrane 54.87 46.27
CDY03043 Canola extracellular 46.9 46.19
CDY45254 Canola endoplasmic reticulum 46.68 46.07
CDY39314 Canola extracellular 46.46 45.75
CDY41382 Canola endoplasmic reticulum, golgi 53.1 45.54
CDX69550 Canola endoplasmic reticulum, extracellular 50.22 45.49
CDY58428 Canola endoplasmic reticulum, golgi, plastid 51.77 45.44
CDY66593 Canola endoplasmic reticulum, extracellular 50.0 45.29
CDY09356 Canola extracellular 44.91 44.42
CDY41679 Canola endoplasmic reticulum, plasma membrane 44.69 44.2
CDX81636 Canola endoplasmic reticulum 46.24 43.18
CDY53552 Canola extracellular 46.68 42.63
CDX81635 Canola mitochondrion, nucleus 0.44 1.32
CDX96858 Canola mitochondrion, nucleus 0.44 1.32
CDY04136 Canola mitochondrion, nucleus 0.44 1.32
CDY09355 Canola mitochondrion, nucleus 0.44 1.32
CDY41678 Canola mitochondrion, nucleus 0.44 1.32
CDY45199 Canola mitochondrion, nucleus 0.44 1.32
CDY45253 Canola mitochondrion, nucleus 0.44 1.32
CDY53553 Canola mitochondrion, nucleus 0.44 1.32
CDY66531 Canola mitochondrion, nucleus 0.44 1.32
Protein Annotations
KEGG:00040+4.2.2.2Gene3D:2.160.20.10MapMan:21.3.5.2GO:A0A078EJ59InterPro:AmbAllergenEnsemblPlants:CDY01151
ProteinID:CDY01151ProteinID:CDY01151.1GO:GO:0005975GO:GO:0008150GO:GO:0008152GO:GO:0009056
GO:GO:0009987GO:GO:0045490EnsemblPlantsGene:GSBRNA2T00111226001InterPro:IPR012334PFAM:PF00544PRINTS:PR00807
PANTHER:PTHR31683PANTHER:PTHR31683:SF63InterPro:Pec_lyaseInterPro:Pectin_lyas_foldInterPro:Pectin_lyase_fold/virulenceSMART:SM00656
SUPFAM:SSF51126TMHMM:TMhelixUniPathway:UPA00545UniParc:UPI0004EDDE1ESEG:seg:
Description
BnaA04g06680D
Coordinates
chrLK031924:+:534379..537909
Molecular Weight (calculated)
49896.1 Da
IEP (calculated)
7.797
GRAVY (calculated)
-0.329
Length
452 amino acids
Sequence
(BLAST)
001: MASSSSQKVT SVCLTVLVLL ALSATILRKI EIPSSRKVKT EELQSSKNTS TMAANRLEGV ELNEQHAVDD PDKVADEVST LVQMSEHNIT ARRKLGFFSC
101: GTGNPIDDCW RCDRNWHKNR KRLADCGIGF GRNAVGGRDG RFYVVTDPTD EDVINPKPGT LRHAVIQDEP LWIVFKRDMV IELKQELIMN SFKTIDGRGA
201: NVHIANGACI TLQFITNVII HGLHIHDCKP TGNAMVRSSP SHFGWRTMAD GDAVSIFQSS HIWIDHNSLS HCADGLVDAV MGSTAITVSN NHFTHHNEVM
301: LLGHSDSYTI DKLMQVTIAY NHFGEGLVQR MPRCRHGYFH VVNNDYTHWE MYAIGGSADP TINSQGNRYA APKNPFAKEV TKRVETDASE WQKWNWRSEG
401: DLLLNGAFFK ASGAEASASY GRASSLAAKP SSMVHTITST AGALGCRRGR PC
Best Arabidopsis Sequence Match ( AT4G13710.2 )
(BLAST)
001: MASSSQKLIS VCVAVLVVLA LTAMIFRNSE ISLSRKLKTE EFQSLNSSTM AATRLDGEPQ QQQHAVADDP DMVADEVAKL VQMSEQNRTA RRKLGFFSCG
101: TGNPIDDCWR CDRNWHKNRK RLADCGIGFG RNAIGGRDGR FYIVTDPTDE DVVNPKPGTL RHAVIQEEPL WIVFKRDMVI ELKQELIMNS FKTIDARGSN
201: VHIANGACIT IQFITNVIIH GLHIHDCKPT GNAMVRSSPS HFGWRTMADG DAVSIFGSSH IWIDHNSLSH CADGLVDAVM GSTAITVSNN HFTHHNEVML
301: LGHSDSYTKD KLMQVTIAYN HFGEGLVQRM PRCRHGYFHV VNNDYTHWEM YAIGGSAEPT INSQGNRYAA PMDRFAKEVT KRVETDASEW KKWNWRSEGD
401: LLLNGAFFRP SGAGASASYG RASSLAAKPS SMVDTITSTA GALGCRKGRP C
Arabidopsis Description
Probable pectate lyase 15 [Source:UniProtKB/Swiss-Prot;Acc:Q944R1]
SUBAcon: [endoplasmic reticulum,extracellular,vacuole]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.