Skip to main content
crop-pal logo
Canola
Search for another protein from :
Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum, extracellular

Predictor Summary:
  • extracellular 6
  • endoplasmic reticulum 6
  • vacuole 5
  • plasma membrane 5
  • golgi 5
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum, extracellular
Any Predictor:secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:endoplasmic reticulum
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plastid
YLoc:extracellular
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
AT3G24670.1 Thale cress endoplasmic reticulum, extracellular 91.57 91.36
CDX77400 Canola endoplasmic reticulum, extracellular 97.95 87.4
CDY05305 Canola endoplasmic reticulum, extracellular, vacuole 76.31 80.53
CDY24654 Canola endoplasmic reticulum, extracellular, vacuole 76.31 80.53
CDY01119 Canola endoplasmic reticulum, extracellular 79.73 80.46
CDY47327 Canola endoplasmic reticulum, extracellular 79.27 80.37
CDY05655 Canola extracellular 74.94 78.9
CDY33938 Canola extracellular 74.72 78.66
CDY19932 Canola extracellular 74.49 78.23
CDY56668 Canola extracellular 73.58 77.27
CDY15517 Canola endoplasmic reticulum, extracellular, golgi 71.98 73.32
CDY61137 Canola extracellular 71.75 73.09
CDX89799 Canola extracellular 71.3 72.62
CDX86615 Canola endoplasmic reticulum, extracellular, golgi 71.3 72.62
CDY70583 Canola cytosol 39.86 72.02
CDY18330 Canola cytosol 23.92 71.92
CDY28857 Canola extracellular 65.6 70.76
CDY12666 Canola extracellular 65.15 70.44
CDY32557 Canola extracellular 64.92 70.2
CDY56220 Canola endoplasmic reticulum, extracellular, vacuole 64.92 70.2
CDY01151 Canola endoplasmic reticulum, extracellular, vacuole 71.98 69.91
CDY56520 Canola extracellular 64.69 69.78
CDY01846 Canola endoplasmic reticulum, extracellular, vacuole 64.46 69.7
CDY03419 Canola endoplasmic reticulum, extracellular 64.46 69.7
CDY34310 Canola endoplasmic reticulum, vacuole 64.46 69.7
CDY08948 Canola endoplasmic reticulum, extracellular 64.46 69.7
CDY11033 Canola endoplasmic reticulum, extracellular 64.46 69.7
CDY53564 Canola endoplasmic reticulum, extracellular, vacuole 72.21 69.67
CDX92652 Canola endoplasmic reticulum, extracellular 64.24 69.46
CDY24847 Canola endoplasmic reticulum, extracellular 64.24 69.46
CDY41506 Canola endoplasmic reticulum, extracellular, vacuole 63.78 67.8
CDY18738 Canola endoplasmic reticulum, extracellular 72.21 66.6
CDY16732 Canola endoplasmic reticulum, golgi 62.87 64.49
CDY48132 Canola endoplasmic reticulum, golgi 62.87 64.49
CDY66697 Canola endoplasmic reticulum, golgi 64.92 63.76
CDX83690 Canola endoplasmic reticulum, extracellular, vacuole 59.0 62.86
CDX77470 Canola golgi, plasma membrane 65.15 62.31
CDY00156 Canola extracellular, plastid 58.31 62.14
CDY20049 Canola plastid, vacuole 58.31 62.14
CDY03964 Canola extracellular 57.63 61.41
CDY65626 Canola golgi 63.1 61.01
CDY34149 Canola extracellular 49.2 60.17
CDY06557 Canola extracellular 48.75 55.3
CDY20748 Canola extracellular 48.75 55.15
CDX98091 Canola extracellular 46.24 54.72
CDY30041 Canola extracellular 46.01 54.45
CDX98092 Canola extracellular 43.74 53.93
CDX82902 Canola endoplasmic reticulum, extracellular, vacuole 40.09 53.82
CDY30040 Canola extracellular 43.28 53.37
CDX70244 Canola vacuole 51.71 51.47
CDX78152 Canola extracellular 54.21 50.0
CDX73573 Canola extracellular 53.99 49.79
CDX67560 Canola plasma membrane 55.35 49.59
CDX79122 Canola extracellular 44.65 48.88
CDX76388 Canola extracellular 45.33 48.77
CDY27438 Canola extracellular 45.1 48.53
CDX67615 Canola endoplasmic reticulum, extracellular, vacuole 53.99 48.27
CDY07515 Canola endoplasmic reticulum, extracellular, vacuole 53.99 48.17
CDX85564 Canola extracellular 51.25 47.57
CDX78607 Canola endoplasmic reticulum, extracellular 51.25 47.37
CDY63769 Canola extracellular 51.48 47.18
CDY56964 Canola endoplasmic reticulum, extracellular, vacuole 52.62 46.95
CDX70590 Canola endoplasmic reticulum, extracellular 50.8 46.95
CDY17432 Canola extracellular 48.97 46.84
CDY28691 Canola endoplasmic reticulum, extracellular, vacuole 49.89 46.7
CDY04133 Canola extracellular 48.75 46.62
CDY45254 Canola endoplasmic reticulum 48.52 46.51
CDX91953 Canola endoplasmic reticulum, extracellular 49.89 46.5
CDX74293 Canola endoplasmic reticulum, extracellular 49.89 46.5
CDY68729 Canola endoplasmic reticulum, extracellular, plasma membrane 48.29 46.29
CDY11284 Canola extracellular, golgi 53.76 46.27
CDY39314 Canola extracellular 48.06 45.97
CDX96854 Canola endoplasmic reticulum, extracellular, plasma membrane 47.84 45.85
CDY03043 Canola extracellular 47.84 45.75
CDY45202 Canola extracellular 47.84 45.75
CDY09356 Canola extracellular 47.61 45.73
CDY41679 Canola endoplasmic reticulum, plasma membrane 47.38 45.51
CDX73426 Canola endoplasmic reticulum, extracellular, vacuole 53.08 45.07
CDY58428 Canola endoplasmic reticulum, golgi, plastid 52.62 44.85
CDY13312 Canola plasma membrane 54.21 44.4
CDY66593 Canola endoplasmic reticulum, extracellular 50.34 44.29
CDX69550 Canola endoplasmic reticulum, extracellular 50.34 44.29
CDY41382 Canola endoplasmic reticulum, golgi 53.08 44.21
CDX81636 Canola endoplasmic reticulum 47.38 42.98
CDY53552 Canola extracellular 47.84 42.42
CDY70492 Canola endoplasmic reticulum, extracellular 3.19 25.45
CDY53553 Canola mitochondrion, nucleus 0.46 1.32
CDX81635 Canola mitochondrion, nucleus 0.46 1.32
CDY45253 Canola mitochondrion, nucleus 0.46 1.32
CDY45199 Canola mitochondrion, nucleus 0.46 1.32
CDY41678 Canola mitochondrion, nucleus 0.46 1.32
CDX96858 Canola mitochondrion, nucleus 0.46 1.32
CDY66531 Canola mitochondrion, nucleus 0.46 1.32
CDY04136 Canola mitochondrion, nucleus 0.46 1.32
CDY09355 Canola mitochondrion, nucleus 0.46 1.32
Protein Annotations
KEGG:00040+4.2.2.2Gene3D:2.160.20.10MapMan:21.3.5.2GO:A0A078I9D4UniProt:A0A078I9D4InterPro:AmbAllergen
EnsemblPlants:CDY46471ProteinID:CDY46471ProteinID:CDY46471.1GO:GO:0003674GO:GO:0003824GO:GO:0005488
GO:GO:0005975GO:GO:0008150GO:GO:0008152GO:GO:0009056GO:GO:0009987GO:GO:0016829
GO:GO:0030570GO:GO:0045490GO:GO:0046872EnsemblPlantsGene:GSBRNA2T00084060001InterPro:IPR012334PFAM:PF00544
PRINTS:PR00807PANTHER:PTHR31683PANTHER:PTHR31683:SF34InterPro:Pec_lyaseInterPro:Pectin_lyas_foldInterPro:Pectin_lyase_fold/virulence
SMART:SM00656SUPFAM:SSF51126SignalP:SignalP-noTMTMHMM:TMhelixUniPathway:UPA00545UniParc:UPI0004EEB196
SEG:seg:::::
Description
BnaC07g03950DPectate lyase [Source:UniProtKB/TrEMBL;Acc:A0A078I9D4]
Coordinates
chrLK032669:+:40449..44460
Molecular Weight (calculated)
48622.9 Da
IEP (calculated)
8.975
GRAVY (calculated)
-0.248
Length
439 amino acids
Sequence
(BLAST)
001: MAVSRSLLAL SASLLVLAFF LCVNASTRAH ETEELKSQSL TNSSTADKLS DGAWNEHAVE NPEEVAALVD MTIRNSTERR KLGFFSCATG NPIDDCWRCD
101: RNWHLRRKRL ANCAIGFGRN AVGGRDGRYY VVTDPSDNDA INPRPGTLRH AVIQDRPLWI VFKRDMVITL KQELIMNSFK TIDGRGVNVA IAGGACITIQ
201: YVTNIIIHGI NIHDCRRTGN AMVRSSPSHY GWRTMADGDA ISIFGSSQIW IDHNSLSNCA DGLIDAIMGS TAITISNNYL THHNEVMLMG HSDSYTRDKV
301: MQVTIAYNHF GEGLIQRMPR CRHGYFHVVN NDYTHWVMYA IGGSANPTIN SQGNRFLAPA NPFAKEVTKR VGSWQGEWKQ WNWRSQGDLM LNGAYFTRSG
401: AATPASYARA SSLGAKPSSV VSMLTYSSGA LKCRIGMRC
Best Arabidopsis Sequence Match ( AT3G24670.1 )
(BLAST)
001: MVIFSRSFLA LSTTLIILAL CINSSTMAQE TEDLNSHSSS NSSTANKLPN DDGAWNEHAV KNPEEVAAMV DMKIKNSTER RRLGFFSCAT GNPIDDCWRC
101: DRNWHLRRKR LANCAIGFGR NAIGGRDGRY YVVTDPSDHD AVNPRPGTLR HAVIQDRPLW IVFKRDMVIT LTQELIMNSF KTIDGRGVNV AIAGGACITI
201: QYVTNIIIHG INVHDCRRTG NAMVRSSPSH YGWRTMADGD AISIFGSSHI WIDHNSLSNC ADGLIDAIMG STAITISNNY MTHHNEVMLM GHSDSYTRDK
301: LMQVTIAYNH FGEGLIQRMP RCRHGYFHVV NNDYTHWVMY AIGGSANPTI NSQGNRFLAP GNPFAKEVTK RVGSWQGEWK QWNWRSQGDL MLNGAYFTKS
401: GAAAPASYAR ASSLGAKPAS VVSMLTYSSG ALKCRIGMRC
Arabidopsis Description
Pectate lyase [Source:UniProtKB/TrEMBL;Acc:A0A178VLR8]
SUBAcon: [endoplasmic reticulum,extracellular]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.