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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular

Predictor Summary:
  • extracellular 7
  • endoplasmic reticulum 6
  • vacuole 5
  • plasma membrane 5
  • golgi 5
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:extracellular
Any Predictor:plastid, secretory
BaCelLo:secretory
ChloroP:plastid
iPSORT:secretory
MultiLoc:endoplasmic reticulum
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:extracellular
YLoc:extracellular
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY34149 Canola extracellular 82.52 94.71
CDX83690 Canola endoplasmic reticulum, extracellular, vacuole 92.23 92.23
AT3G27400.2 Thale cress endoplasmic reticulum, vacuole 91.26 90.38
CDY00156 Canola extracellular, plastid 88.35 88.35
CDY20049 Canola plastid, vacuole 88.11 88.11
CDY18330 Canola cytosol 28.64 80.82
VIT_14s0219g00230.t01 Wine grape endoplasmic reticulum, extracellular, vacuole 74.51 76.18
KRG93976 Soybean extracellular 74.03 75.5
KRH58231 Soybean extracellular 74.03 75.5
Solyc02g093580.2.1 Tomato endoplasmic reticulum, extracellular, vacuole 73.3 74.75
PGSC0003DMT400032910 Potato endoplasmic reticulum, extracellular, vacuole 73.06 74.69
CDY08948 Canola endoplasmic reticulum, extracellular 71.84 72.91
CDY24847 Canola endoplasmic reticulum, extracellular 71.6 72.66
CDY34310 Canola endoplasmic reticulum, vacuole 71.6 72.66
CDY03419 Canola endoplasmic reticulum, extracellular 71.36 72.41
CDY28857 Canola extracellular 71.12 71.99
CDY56220 Canola endoplasmic reticulum, extracellular, vacuole 70.63 71.67
CDX92652 Canola endoplasmic reticulum, extracellular 70.63 71.67
CDY56520 Canola extracellular 70.63 71.5
CDY01846 Canola endoplasmic reticulum, extracellular, vacuole 70.39 71.43
CDY11033 Canola endoplasmic reticulum, extracellular 70.39 71.43
CDY70583 Canola cytosol 41.75 70.78
CDY12666 Canola extracellular 69.42 70.44
CDY32557 Canola extracellular 69.17 70.2
CDY41506 Canola endoplasmic reticulum, extracellular, vacuole 69.9 69.73
CDY48132 Canola endoplasmic reticulum, golgi 69.42 66.82
CDY16732 Canola endoplasmic reticulum, golgi 69.17 66.59
CDY05305 Canola endoplasmic reticulum, extracellular, vacuole 64.81 64.18
CDY24654 Canola endoplasmic reticulum, extracellular, vacuole 64.56 63.94
CDY65626 Canola golgi 69.9 63.44
CDY19932 Canola extracellular 63.35 62.44
CDY33938 Canola extracellular 63.11 62.35
CDY05655 Canola extracellular 63.11 62.35
CDY56668 Canola extracellular 63.11 62.2
CDX89799 Canola extracellular 64.08 61.25
CDY61137 Canola extracellular 63.84 61.02
CDY15517 Canola endoplasmic reticulum, extracellular, golgi 63.11 60.32
CDX86615 Canola endoplasmic reticulum, extracellular, golgi 62.86 60.09
CDY47327 Canola endoplasmic reticulum, extracellular 62.38 59.35
CDY01119 Canola endoplasmic reticulum, extracellular 62.38 59.08
CDY46471 Canola endoplasmic reticulum, extracellular 61.41 57.63
CDY53564 Canola endoplasmic reticulum, extracellular, vacuole 63.59 57.58
CDY01151 Canola endoplasmic reticulum, extracellular, vacuole 62.86 57.3
CDX98092 Canola extracellular 48.06 55.62
CDY18738 Canola endoplasmic reticulum, extracellular 64.08 55.46
CDY30040 Canola extracellular 47.57 55.06
CDY66697 Canola endoplasmic reticulum, golgi 58.98 54.36
CDX98091 Canola extracellular 48.79 54.18
CDY30041 Canola extracellular 48.54 53.91
CDX77470 Canola golgi, plasma membrane 59.95 53.81
CDY06557 Canola extracellular 50.49 53.75
CDY20748 Canola extracellular 50.49 53.61
CDX82902 Canola endoplasmic reticulum, extracellular, vacuole 42.23 53.21
CDX77400 Canola endoplasmic reticulum, extracellular 61.16 51.22
CDX79122 Canola extracellular 48.54 49.88
CDY27438 Canola extracellular 48.3 48.77
CDX70244 Canola vacuole 52.18 48.75
CDX76388 Canola extracellular 47.82 48.28
CDX78152 Canola extracellular 53.88 46.64
CDX73573 Canola extracellular 53.64 46.43
CDX91953 Canola endoplasmic reticulum, extracellular 52.91 46.28
CDX74293 Canola endoplasmic reticulum, extracellular 52.91 46.28
CDY28691 Canola endoplasmic reticulum, extracellular, vacuole 52.67 46.27
CDX70590 Canola endoplasmic reticulum, extracellular 53.16 46.11
CDX78607 Canola endoplasmic reticulum, extracellular 52.43 45.47
CDY68729 Canola endoplasmic reticulum, extracellular, plasma membrane 50.49 45.41
CDY17432 Canola extracellular 50.49 45.32
CDX67560 Canola plasma membrane 53.88 45.31
CDX85564 Canola extracellular 51.7 45.03
CDX96854 Canola endoplasmic reticulum, extracellular, plasma membrane 50.0 44.98
CDY03043 Canola extracellular 50.0 44.88
CDY04133 Canola extracellular 50.0 44.88
CDY41679 Canola endoplasmic reticulum, plasma membrane 49.76 44.86
CDY45202 Canola extracellular 49.76 44.66
CDY09356 Canola extracellular 49.51 44.64
CDY56964 Canola endoplasmic reticulum, extracellular, vacuole 53.16 44.51
CDY07515 Canola endoplasmic reticulum, extracellular, vacuole 53.16 44.51
CDY63769 Canola extracellular 51.7 44.47
CDX67615 Canola endoplasmic reticulum, extracellular, vacuole 52.91 44.4
CDY39314 Canola extracellular 49.03 44.01
CDY11284 Canola extracellular, golgi 54.13 43.73
CDY45254 Canola endoplasmic reticulum 48.54 43.67
CDY58428 Canola endoplasmic reticulum, golgi, plastid 54.13 43.3
CDX69550 Canola endoplasmic reticulum, extracellular 51.7 42.69
CDY66593 Canola endoplasmic reticulum, extracellular 51.46 42.48
CDX73426 Canola endoplasmic reticulum, extracellular, vacuole 53.16 42.36
CDX81636 Canola endoplasmic reticulum 49.76 42.36
CDY53552 Canola extracellular 50.73 42.22
CDY41382 Canola endoplasmic reticulum, golgi 52.91 41.37
CDY13312 Canola plasma membrane 53.4 41.04
CDY70492 Canola endoplasmic reticulum, extracellular 0.49 3.64
CDX96858 Canola mitochondrion, nucleus 0.49 1.32
CDX81635 Canola mitochondrion, nucleus 0.49 1.32
CDY66531 Canola mitochondrion, nucleus 0.49 1.32
CDY04136 Canola mitochondrion, nucleus 0.49 1.32
CDY09355 Canola mitochondrion, nucleus 0.49 1.32
CDY53553 Canola mitochondrion, nucleus 0.49 1.32
CDY45253 Canola mitochondrion, nucleus 0.49 1.32
CDY45199 Canola mitochondrion, nucleus 0.49 1.32
CDY41678 Canola mitochondrion, nucleus 0.49 1.32
Protein Annotations
KEGG:00040+4.2.2.2Gene3D:2.160.20.10MapMan:21.3.5.2GO:A0A078ETN8InterPro:AmbAllergenEnsemblPlants:CDY03964
ProteinID:CDY03964ProteinID:CDY03964.1GO:GO:0005975GO:GO:0008150GO:GO:0008152GO:GO:0009056
GO:GO:0009987GO:GO:0045490EnsemblPlantsGene:GSBRNA2T00117484001InterPro:IPR012334PFAM:PF00544PRINTS:PR00807
PANTHER:PTHR31683PANTHER:PTHR31683:SF29InterPro:Pec_lyaseInterPro:Pectin_lyas_foldInterPro:Pectin_lyase_fold/virulenceSMART:SM00656
SUPFAM:SSF51126SignalP:SignalP-TMTMHMM:TMhelixUniPathway:UPA00545UniParc:UPI0004EE96C1SEG:seg
Description
BnaC02g36790D
Coordinates
chrLK031948:+:1808..4647
Molecular Weight (calculated)
46135.5 Da
IEP (calculated)
8.738
GRAVY (calculated)
-0.378
Length
412 amino acids
Sequence
(BLAST)
001: MVSYSNSLFL YTFIFLISFG NTIAFSASSL PHVQDPNLVV DEVNRSVFNA SRRSLAYLSC RTGNPIDDCW RCDPNWETNR QRLADCAIGF GKHAIGGRSG
101: RIYVVTDPAN DDPVNPRPGT LRHAVTQEEP LWIIFKRDMV IRLKKELIIT SFKTIDGRGS SVHITDGPCI KIHYATNIIV HGINIHDCKP GSAGMIRDGP
201: RHTGWWVKSD GDAVALFGGR HVWIDHCSFS NCDDGLIDAI HGSTAITISN NHMTHHDKVM LLGHHDSYTQ DKNMQVTIAF NHFGEGLVQR MPRCRHGYFH
301: VVNNDYTHWE MYAIGGSASP TIFSQGNRFL APNTRFNKEV TKHEDAPESK WRHWNWRSEG DILLNGAYFR QSGARSSSTY ARASSLSARP SSLVGSITTT
401: AGTLSCRRGR RC
Best Arabidopsis Sequence Match ( AT3G27400.1 )
(BLAST)
001: MVSYSNNHFA YAFLLLLTIG NTLAFSSSLP DHVQDPNLVV DDVNRSVFNA SRRSLAYLSC RTGNPIDDCW RCDPNWETNR QRLADCAIGF GKNAIGGRKG
101: RIYVVTDPAN DDPVNPRPGT LRYAVTQEEP LWIIFKRDMV IRLKKELIIT SFKTIDGRGS SVHITDGPCL KIHYATNIII HGINIHDCKP GSGGMIKDGP
201: HHTGWWMQSD GDAVAIFGGK HVWIDHCSLS NCDDGLIDAI HGSTAITISN NHMTHHDKVM LLGHSDSYTQ DKNMQVTIAF NHFGEGLVQR MPRCRHGYFH
301: VVNNDYTHWE MYAIGGSASP TIYSQGNRFL APNTRFNKEV TKHEDAPESK WRDWNWRSEG DMLLNGAYFR ESGAEAPSTY ARASSLSARP SSLVGSITTT
401: AGTLSCRRGR RC
Arabidopsis Description
Pectate lyase [Source:UniProtKB/TrEMBL;Acc:A0A1I9LNU6]
SUBAcon: [extracellular]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.