Skip to main content
crop-pal logo
Canola
Search for another protein from :
Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: vacuole

Predictor Summary:
  • plastid 1
  • extracellular 2
  • endoplasmic reticulum 3
  • vacuole 4
  • plasma membrane 2
  • golgi 2
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:vacuole
Any Predictor:plastid, secretory
BaCelLo:plastid
iPSORT:secretory
MultiLoc:endoplasmic reticulum
PProwler:mitochondrion
TargetP:secretory
WoLF PSORT:vacuole
YLoc:vacuole
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra009469.1-P Field mustard extracellular, plastid, vacuole 95.69 80.53
CDY41382 Canola endoplasmic reticulum, golgi 95.69 80.08
CDY11284 Canola extracellular, golgi 87.76 75.88
CDY58428 Canola endoplasmic reticulum, golgi, plastid 87.98 75.34
AT5G04310.1 Thale cress plasma membrane 87.3 74.32
CDY18330 Canola cytosol 21.09 63.7
HORVU5Hr1G005000.2 Barley cytosol 48.98 63.34
Solyc11g008140.1.1 Tomato plasma membrane 63.49 62.36
PGSC0003DMT400011046 Potato mitochondrion 38.78 58.76
CDX92652 Canola endoplasmic reticulum, extracellular 53.06 57.64
CDY11033 Canola endoplasmic reticulum, extracellular 53.06 57.64
CDY34310 Canola endoplasmic reticulum, vacuole 53.06 57.64
CDY03419 Canola endoplasmic reticulum, extracellular 52.83 57.39
VIT_13s0019g04910.t01 Wine grape extracellular 64.4 57.26
CDY08948 Canola endoplasmic reticulum, extracellular 52.61 57.14
CDY24847 Canola endoplasmic reticulum, extracellular 52.61 57.14
PGSC0003DMT400079776 Potato plasma membrane 62.81 56.53
CDY07515 Canola endoplasmic reticulum, extracellular, vacuole 62.81 56.3
CDY56668 Canola extracellular 53.29 56.22
KRG90767 Soybean extracellular 63.95 56.18
CDY01846 Canola endoplasmic reticulum, extracellular, vacuole 51.7 56.16
CDY56220 Canola endoplasmic reticulum, extracellular, vacuole 51.7 56.16
CDX67615 Canola endoplasmic reticulum, extracellular, vacuole 62.36 56.01
CDY19932 Canola extracellular 52.83 55.74
CDY28857 Canola extracellular 51.25 55.53
CDY56520 Canola extracellular 51.25 55.53
CDY41506 Canola endoplasmic reticulum, extracellular, vacuole 51.47 54.96
CDY12666 Canola extracellular 50.57 54.93
CDY32557 Canola extracellular 50.57 54.93
CDY05305 Canola endoplasmic reticulum, extracellular, vacuole 51.7 54.81
KRH35994 Soybean extracellular 62.59 54.76
CDY05655 Canola extracellular 51.7 54.68
CDY33938 Canola extracellular 51.7 54.68
Solyc05g055510.2.1 Tomato plasma membrane 61.22 54.66
CDY24654 Canola endoplasmic reticulum, extracellular, vacuole 51.47 54.57
CDY56964 Canola endoplasmic reticulum, extracellular, vacuole 60.77 54.47
CDX83690 Canola endoplasmic reticulum, extracellular, vacuole 50.79 54.37
Solyc03g071570.2.1 Tomato endoplasmic reticulum, plasma membrane, vacuole 61.68 53.97
CDY70583 Canola cytosol 29.71 53.91
CDY15517 Canola endoplasmic reticulum, extracellular, golgi 52.61 53.83
CDX86615 Canola endoplasmic reticulum, extracellular, golgi 52.38 53.6
CDX89799 Canola extracellular 52.15 53.36
CDX73573 Canola extracellular 57.37 53.15
CDX78152 Canola extracellular 57.37 53.15
CDY61137 Canola extracellular 51.93 53.13
CDY00156 Canola extracellular, plastid 49.43 52.91
CDY20049 Canola plastid, vacuole 49.21 52.67
CDY01119 Canola endoplasmic reticulum, extracellular 51.93 52.64
CDY16732 Canola endoplasmic reticulum, golgi 50.79 52.34
CDY47327 Canola endoplasmic reticulum, extracellular 51.25 52.19
CDY03964 Canola extracellular 48.75 52.18
CDY48132 Canola endoplasmic reticulum, golgi 50.57 52.1
CDY46471 Canola endoplasmic reticulum, extracellular 51.47 51.71
CDX73426 Canola endoplasmic reticulum, extracellular, vacuole 60.54 51.64
CDX67560 Canola plasma membrane 57.14 51.43
CDX82902 Canola endoplasmic reticulum, extracellular, vacuole 38.1 51.38
CDY01151 Canola endoplasmic reticulum, extracellular, vacuole 52.61 51.33
CDY34149 Canola extracellular 41.72 51.25
CDY53564 Canola endoplasmic reticulum, extracellular, vacuole 52.83 51.21
CDY06557 Canola extracellular 44.67 50.9
CDX98092 Canola extracellular 41.04 50.84
CDY30040 Canola extracellular 41.04 50.84
CDY20748 Canola extracellular 44.67 50.77
CDX98091 Canola extracellular 42.4 50.4
CDY66697 Canola endoplasmic reticulum, golgi 51.02 50.34
CDY65626 Canola golgi 51.25 49.78
CDY30041 Canola extracellular 41.72 49.6
CDY18738 Canola endoplasmic reticulum, extracellular 53.51 49.58
CDX77470 Canola golgi, plasma membrane 51.25 49.24
CDX79122 Canola extracellular 43.54 47.88
PGSC0003DMT400060374 Potato extracellular, plasma membrane, vacuole 61.22 47.29
CDY27438 Canola extracellular 43.31 46.81
CDY13312 Canola plasma membrane 56.69 46.64
CDX76388 Canola extracellular 43.08 46.57
CDX77400 Canola endoplasmic reticulum, extracellular 51.7 46.34
CDX96854 Canola endoplasmic reticulum, extracellular, plasma membrane 43.08 41.48
CDY68729 Canola endoplasmic reticulum, extracellular, plasma membrane 43.08 41.48
CDY17432 Canola extracellular 42.86 41.18
CDY04133 Canola extracellular 42.63 40.96
CDY45202 Canola extracellular 42.63 40.96
CDY45254 Canola endoplasmic reticulum 42.18 40.61
CDY39314 Canola extracellular 42.18 40.52
CDX74293 Canola endoplasmic reticulum, extracellular 42.86 40.13
CDX91953 Canola endoplasmic reticulum, extracellular 42.86 40.13
CDY03043 Canola extracellular 41.72 40.09
CDY63769 Canola extracellular 43.54 40.08
CDY28691 Canola endoplasmic reticulum, extracellular, vacuole 42.4 39.87
CDX70590 Canola endoplasmic reticulum, extracellular 42.86 39.79
CDX78607 Canola endoplasmic reticulum, extracellular 42.86 39.79
CDX85564 Canola extracellular 42.63 39.75
CDY09356 Canola extracellular 41.04 39.61
CDY41679 Canola endoplasmic reticulum, plasma membrane 41.04 39.61
CDX81636 Canola endoplasmic reticulum 43.08 39.26
CDY53552 Canola extracellular 43.54 38.79
CDX69550 Canola endoplasmic reticulum, extracellular 43.54 38.48
CDY66593 Canola endoplasmic reticulum, extracellular 43.54 38.48
CDY70492 Canola endoplasmic reticulum, extracellular 1.36 10.91
CDX81635 Canola mitochondrion, nucleus 0.0 0.0
CDX96858 Canola mitochondrion, nucleus 0.0 0.0
CDY04136 Canola mitochondrion, nucleus 0.0 0.0
CDY09355 Canola mitochondrion, nucleus 0.0 0.0
CDY41678 Canola mitochondrion, nucleus 0.0 0.0
CDY45199 Canola mitochondrion, nucleus 0.0 0.0
CDY45253 Canola mitochondrion, nucleus 0.0 0.0
CDY53553 Canola mitochondrion, nucleus 0.0 0.0
CDY66531 Canola mitochondrion, nucleus 0.0 0.0
Protein Annotations
KEGG:00040+4.2.2.2Gene3D:2.160.20.10MapMan:21.3.5.2GO:A0A078C1V4InterPro:AmbAllergenEnsemblPlants:CDX70244
ProteinID:CDX70244ProteinID:CDX70244.1GO:GO:0005975GO:GO:0008150GO:GO:0008152GO:GO:0009056
GO:GO:0009987GO:GO:0045490EnsemblPlantsGene:GSBRNA2T00136381001InterPro:IPR012334PFAM:PF00544PRINTS:PR00807
PANTHER:PTHR31683PANTHER:PTHR31683:SF11InterPro:Pec_lyaseInterPro:Pectin_lyas_foldInterPro:Pectin_lyase_fold/virulenceSMART:SM00656
SUPFAM:SSF51126UniPathway:UPA00545UniParc:UPI0004EF26B3SEG:seg::
Description
BnaA10g25930D
Coordinates
chrLK031790:+:3741867..3751738
Molecular Weight (calculated)
48006.3 Da
IEP (calculated)
6.640
GRAVY (calculated)
-0.234
Length
441 amino acids
Sequence
(BLAST)
001: MVAHERVHIL QKPTCIGIIW FCLLVSLSIH GRASYSYTSS ATTSTSSSNL SLPHQHPFPE DVVLNLNDSL YRRNLLTYQQ GDGDTTASAP IPSCITGNPI
101: DDCWRCDPNW SQNRQRLADC SIGFGQGTLG GKGGRFYLVT DSSDDDAANP TPGTLRHAVI QPEPLWIVFS GDMGIRLRHE LIVGSYKTID GRGANVQITG
201: HGCLTIQQVS HVIIHNVHVH HCKPSGNTLV ASGVSDGDGI SVSASHHIWV DHCSLGYCSD GLIDVILAST AVTISNNYFH HHDEVMLLGH DDRYTADTGM
301: QVTIAFNHFG EGLVQRMPRC RHGYVHVVNN DFTAWEMYAI GGSANPTINS QGNRYTAPIN PNAKEVTKRV DTNEKHWGKW NWRTDGDVMV NGAFFVPSGD
401: GVSLAYARAT SLQAKAAGFI DQLTVNAGVF GDPSQASDTV R
Best Arabidopsis Sequence Match ( AT5G04310.3 )
(BLAST)
001: MVAHERRIHN LQKPTCICII WFCLLVSLSH HGRASSTSAS IFNLSLPHQH PFPEHVVLNV QRKLNDSLSR RQLLTYQQDD GTTASSPIPS CITGNPIDDC
101: WRCDPNWSAN RQRLADCSIG FGQGTLGGKG GQFYLVTDSS DNDAANPIPG TLRHAVIQPE PLWIIFSSDM GIKLKHELII GSYKTIDGRG TNIQITGHGC
201: LTIQQVSHVI IHNVHIHHCK PSGNTLVASS PTHVGFRGVS DGDGISVSAS HHIWVDHCSL GYCADGLIDV ILASTAVTIS NNYFSHHDEV MLLGHDDRYT
301: ADKGMQVTIA FNHFGEGLVQ RMPRCRHGYI HVVNNDFTAW EMYAIGGSAS PTINSQGNRY TAPIDPNAKE VTKRVDSNEK HWSGWNWRTE GDVMVNGAFF
401: VPSGDGVSPA YARATSVQPK AAAIIDQLTV NAGVFGDPRY YYQIIYSIAS STQTSIYFIT FIFASILLFD SFNYF
Arabidopsis Description
Pectate lyase [Source:UniProtKB/TrEMBL;Acc:F4JW80]
SUBAcon: [mitochondrion,endoplasmic reticulum,vacuole,plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.