Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, extracellular
Predictor Summary:
Predictor Summary:
- plastid 2
- extracellular 4
- endoplasmic reticulum 4
- vacuole 3
- plasma membrane 3
- golgi 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY18738 | Canola | endoplasmic reticulum, extracellular | 96.36 | 11.13 |
| CDY53564 | Canola | endoplasmic reticulum, extracellular, vacuole | 78.18 | 9.45 |
| CDY01151 | Canola | endoplasmic reticulum, extracellular, vacuole | 72.73 | 8.85 |
| CDY66697 | Canola | endoplasmic reticulum, golgi | 38.18 | 4.7 |
| CDX77470 | Canola | golgi, plasma membrane | 38.18 | 4.58 |
| CDY46471 | Canola | endoplasmic reticulum, extracellular | 25.45 | 3.19 |
| CDX77400 | Canola | endoplasmic reticulum, extracellular | 25.45 | 2.85 |
| CDY01119 | Canola | endoplasmic reticulum, extracellular | 18.18 | 2.3 |
| CDY05655 | Canola | extracellular | 16.36 | 2.16 |
| CDY47327 | Canola | endoplasmic reticulum, extracellular | 16.36 | 2.08 |
| CDX98092 | Canola | extracellular | 12.73 | 1.97 |
| CDY30040 | Canola | extracellular | 12.73 | 1.97 |
| CDY05305 | Canola | endoplasmic reticulum, extracellular, vacuole | 14.55 | 1.92 |
| CDY24654 | Canola | endoplasmic reticulum, extracellular, vacuole | 14.55 | 1.92 |
| CDY33938 | Canola | extracellular | 14.55 | 1.92 |
| CDX67560 | Canola | plasma membrane | 14.55 | 1.63 |
| CDX67615 | Canola | endoplasmic reticulum, extracellular, vacuole | 14.55 | 1.63 |
| CDY07515 | Canola | endoplasmic reticulum, extracellular, vacuole | 14.55 | 1.63 |
| CDX98091 | Canola | extracellular | 10.91 | 1.62 |
| CDY30041 | Canola | extracellular | 10.91 | 1.62 |
| KRH02031 | Soybean | extracellular | 10.91 | 1.51 |
| CDY13312 | Canola | plasma membrane | 14.55 | 1.49 |
| CDX73573 | Canola | extracellular | 12.73 | 1.47 |
| CDX78152 | Canola | extracellular | 12.73 | 1.47 |
| CDY19932 | Canola | extracellular | 10.91 | 1.44 |
| CDY56668 | Canola | extracellular | 10.91 | 1.44 |
| KRH36487 | Soybean | extracellular | 7.27 | 1.4 |
| CDY61137 | Canola | extracellular | 10.91 | 1.39 |
| CDX70244 | Canola | vacuole | 10.91 | 1.36 |
| KRH11474 | Soybean | extracellular | 9.09 | 1.34 |
| VIT_10s0116g01160.t01 | Wine grape | endoplasmic reticulum, extracellular | 9.09 | 1.31 |
| CDY45254 | Canola | endoplasmic reticulum | 10.91 | 1.31 |
| CDY39314 | Canola | extracellular | 10.91 | 1.31 |
| CDX85564 | Canola | extracellular | 10.91 | 1.27 |
| CDX78607 | Canola | endoplasmic reticulum, extracellular | 10.91 | 1.26 |
| CDY56220 | Canola | endoplasmic reticulum, extracellular, vacuole | 9.09 | 1.23 |
| CDY56964 | Canola | endoplasmic reticulum, extracellular, vacuole | 10.91 | 1.22 |
| CDY53552 | Canola | extracellular | 10.91 | 1.21 |
| CDX89799 | Canola | extracellular | 9.09 | 1.16 |
| CDY41382 | Canola | endoplasmic reticulum, golgi | 10.91 | 1.14 |
| CDY34149 | Canola | extracellular | 7.27 | 1.11 |
| CDY09356 | Canola | extracellular | 9.09 | 1.09 |
| CDY41679 | Canola | endoplasmic reticulum, plasma membrane | 9.09 | 1.09 |
| CDX96854 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 9.09 | 1.09 |
| CDY68729 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 9.09 | 1.09 |
| CDY04133 | Canola | extracellular | 9.09 | 1.09 |
| CDY17432 | Canola | extracellular | 9.09 | 1.09 |
| CDY28691 | Canola | endoplasmic reticulum, extracellular, vacuole | 9.09 | 1.07 |
| CDX74293 | Canola | endoplasmic reticulum, extracellular | 9.09 | 1.06 |
| CDX91953 | Canola | endoplasmic reticulum, extracellular | 9.09 | 1.06 |
| PGSC0003DMT400042395 | Potato | extracellular | 7.27 | 1.05 |
| CDY63769 | Canola | extracellular | 9.09 | 1.04 |
| CDX69550 | Canola | endoplasmic reticulum, extracellular | 9.09 | 1.0 |
| CDY66593 | Canola | endoplasmic reticulum, extracellular | 9.09 | 1.0 |
| CDY01846 | Canola | endoplasmic reticulum, extracellular, vacuole | 7.27 | 0.99 |
| CDY11033 | Canola | endoplasmic reticulum, extracellular | 7.27 | 0.99 |
| CDY28857 | Canola | extracellular | 7.27 | 0.98 |
| CDY56520 | Canola | extracellular | 7.27 | 0.98 |
| CDY27438 | Canola | extracellular | 7.27 | 0.98 |
| CDY00156 | Canola | extracellular, plastid | 7.27 | 0.97 |
| CDX73426 | Canola | endoplasmic reticulum, extracellular, vacuole | 9.09 | 0.97 |
| CDY15517 | Canola | endoplasmic reticulum, extracellular, golgi | 7.27 | 0.93 |
| CDY45202 | Canola | extracellular | 7.27 | 0.87 |
| CDX70590 | Canola | endoplasmic reticulum, extracellular | 7.27 | 0.84 |
| CDX81636 | Canola | endoplasmic reticulum | 7.27 | 0.83 |
| CDY11284 | Canola | extracellular, golgi | 7.27 | 0.78 |
| CDY58428 | Canola | endoplasmic reticulum, golgi, plastid | 7.27 | 0.78 |
| CDY06557 | Canola | extracellular | 5.45 | 0.78 |
| CDY20748 | Canola | extracellular | 5.45 | 0.77 |
| CDX92652 | Canola | endoplasmic reticulum, extracellular | 5.45 | 0.74 |
| CDY03419 | Canola | endoplasmic reticulum, extracellular | 5.45 | 0.74 |
| CDY08948 | Canola | endoplasmic reticulum, extracellular | 5.45 | 0.74 |
| CDY12666 | Canola | extracellular | 5.45 | 0.74 |
| CDY24847 | Canola | endoplasmic reticulum, extracellular | 5.45 | 0.74 |
| CDY32557 | Canola | extracellular | 5.45 | 0.74 |
| CDY34310 | Canola | endoplasmic reticulum, vacuole | 5.45 | 0.74 |
| CDX76388 | Canola | extracellular | 5.45 | 0.74 |
| CDX83690 | Canola | endoplasmic reticulum, extracellular, vacuole | 5.45 | 0.73 |
| CDY20049 | Canola | plastid, vacuole | 5.45 | 0.73 |
| CDY41506 | Canola | endoplasmic reticulum, extracellular, vacuole | 5.45 | 0.73 |
| CDY16732 | Canola | endoplasmic reticulum, golgi | 5.45 | 0.7 |
| CDY48132 | Canola | endoplasmic reticulum, golgi | 5.45 | 0.7 |
| CDY03043 | Canola | extracellular | 5.45 | 0.65 |
| CDX82902 | Canola | endoplasmic reticulum, extracellular, vacuole | 3.64 | 0.61 |
| KRH36488 | Soybean | extracellular | 3.64 | 0.5 |
| CDX79122 | Canola | extracellular | 3.64 | 0.5 |
| CDY03964 | Canola | extracellular | 3.64 | 0.49 |
| CDX86615 | Canola | endoplasmic reticulum, extracellular, golgi | 3.64 | 0.46 |
| CDY65626 | Canola | golgi | 3.64 | 0.44 |
| Solyc02g080910.2.1 | Tomato | extracellular | 5.45 | 0.4 |
| CDX81635 | Canola | mitochondrion, nucleus | 0.0 | 0.0 |
| CDX96858 | Canola | mitochondrion, nucleus | 0.0 | 0.0 |
| CDY04136 | Canola | mitochondrion, nucleus | 0.0 | 0.0 |
| CDY09355 | Canola | mitochondrion, nucleus | 0.0 | 0.0 |
| CDY18330 | Canola | cytosol | 0.0 | 0.0 |
| CDY41678 | Canola | mitochondrion, nucleus | 0.0 | 0.0 |
| CDY45199 | Canola | mitochondrion, nucleus | 0.0 | 0.0 |
| CDY45253 | Canola | mitochondrion, nucleus | 0.0 | 0.0 |
| CDY53553 | Canola | mitochondrion, nucleus | 0.0 | 0.0 |
| CDY66531 | Canola | mitochondrion, nucleus | 0.0 | 0.0 |
| CDY70583 | Canola | cytosol | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:CDY70492 | EnsemblPlantsGene:GSBRNA2T00003889001 | ProteinID:CDY70492 | ProteinID:CDY70492.1 | SEG:seg | TMHMM:TMhelix |
| UniParc:UPI0004EEEDE0 | UniProt:A0A078JXV8 | MapMan:35.2 | : | : | : |
Description
BnaA08g29790DBnaA08g29790D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JXV8]
Coordinates
chrLK042283:+:1183..1570
Molecular Weight (calculated)
6045.6 Da
IEP (calculated)
11.696
GRAVY (calculated)
0.045
Length
55 amino acids
Sequence
(BLAST)
(BLAST)
1: MASPSRKLTS VCLAVIVLLA LTATIFRKLE IPSSRKLKTE ELRSAKNNST MAAKR
001: MASSSQKLIS VCVAVLVVLA LTAMIFRNSE ISLSRKLKTE EFQSLNSSTM AATRLDGEPQ QQQHAVADDP DMVADEVAKL VQMSEQNRTA RRKLGFFSCG
101: TGNPIDDCWR CDRNWHKNRK RLADCGIGFG RNAIGGRDGR FYIVTDPTDE DVVNPKPGTL RHAVIQEEPL WIVFKRDMVI ELKQELIMNS FKTIDARGSN
201: VHIANGACIT IQFITNVIIH GLHIHDCKPT GNAMVRSSPS HFGWRTMADG DAVSIFGSSH IWIDHNSLSH CADGLVDAVM GSTAITVSNN HFTHHNEVML
301: LGHSDSYTKD KLMQVTIAYN HFGEGLVQRM PRCRHGYFHV VNNDYTHWEM YAIGGSAEPT INSQGNRYAA PMDRFAKEVT KRVETDASEW KKWNWRSEGD
401: LLLNGAFFRP SGAGASASYG RASSLAAKPS SMVDTITSTA GALGCRKGRP C
101: TGNPIDDCWR CDRNWHKNRK RLADCGIGFG RNAIGGRDGR FYIVTDPTDE DVVNPKPGTL RHAVIQEEPL WIVFKRDMVI ELKQELIMNS FKTIDARGSN
201: VHIANGACIT IQFITNVIIH GLHIHDCKPT GNAMVRSSPS HFGWRTMADG DAVSIFGSSH IWIDHNSLSH CADGLVDAVM GSTAITVSNN HFTHHNEVML
301: LGHSDSYTKD KLMQVTIAYN HFGEGLVQRM PRCRHGYFHV VNNDYTHWEM YAIGGSAEPT INSQGNRYAA PMDRFAKEVT KRVETDASEW KKWNWRSEGD
401: LLLNGAFFRP SGAGASASYG RASSLAAKPS SMVDTITSTA GALGCRKGRP C
Arabidopsis Description
Probable pectate lyase 15 [Source:UniProtKB/Swiss-Prot;Acc:Q944R1]
SUBAcon: [endoplasmic reticulum,extracellular,vacuole]
SUBAcon: [endoplasmic reticulum,extracellular,vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.