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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum, extracellular, vacuole

Predictor Summary:
  • extracellular 6
  • endoplasmic reticulum 6
  • vacuole 6
  • plasma membrane 5
  • golgi 5
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum, extracellular, vacuole
Any Predictor:secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:endoplasmic reticulum
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:extracellular
YLoc:vacuole
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra038614.1-P Field mustard endoplasmic reticulum, extracellular, plasma membrane 99.27 99.27
CDY48132 Canola endoplasmic reticulum, golgi 94.43 91.12
CDY16732 Canola endoplasmic reticulum, golgi 93.95 90.65
CDY65626 Canola golgi 97.34 88.55
AT5G63180.1 Thale cress plastid 92.49 88.43
VIT_17s0000g09810.t01 Wine grape endoplasmic reticulum, extracellular, vacuole 80.39 82.38
CDY24847 Canola endoplasmic reticulum, extracellular 80.63 82.02
CDY08948 Canola endoplasmic reticulum, extracellular 80.15 81.53
VIT_01s0137g00240.t01 Wine grape extracellular 79.18 81.14
CDY03419 Canola endoplasmic reticulum, extracellular 79.66 81.03
PGSC0003DMT400027955 Potato extracellular 78.45 80.8
Solyc05g014000.2.1 Tomato extracellular, nucleus 78.45 80.8
CDY34310 Canola endoplasmic reticulum, vacuole 79.42 80.79
CDY11033 Canola endoplasmic reticulum, extracellular 78.69 80.05
CDX92652 Canola endoplasmic reticulum, extracellular 78.45 79.8
GSMUA_Achr6P28260_001 Banana endoplasmic reticulum, extracellular 78.21 79.36
CDY18330 Canola cytosol 27.6 78.08
CDY70583 Canola cytosol 45.52 77.37
CDY28857 Canola extracellular 75.79 76.9
CDY56520 Canola extracellular 75.54 76.66
CDY12666 Canola extracellular 75.3 76.6
CDY32557 Canola extracellular 75.06 76.35
CDY56220 Canola endoplasmic reticulum, extracellular, vacuole 75.06 76.35
CDY01846 Canola endoplasmic reticulum, extracellular, vacuole 74.82 76.11
CDX83690 Canola endoplasmic reticulum, extracellular, vacuole 71.43 71.6
CDY20049 Canola plastid, vacuole 70.94 71.12
CDY00156 Canola extracellular, plastid 70.7 70.87
CDY03964 Canola extracellular 69.73 69.9
CDY34149 Canola extracellular 59.32 68.25
CDY19932 Canola extracellular 69.01 68.18
CDY56668 Canola extracellular 68.77 67.94
CDY05305 Canola endoplasmic reticulum, extracellular, vacuole 68.04 67.55
CDY05655 Canola extracellular 68.04 67.39
CDY33938 Canola extracellular 68.04 67.39
CDY24654 Canola endoplasmic reticulum, extracellular, vacuole 67.55 67.07
CDY47327 Canola endoplasmic reticulum, extracellular 69.49 66.28
CDY01119 Canola endoplasmic reticulum, extracellular 69.73 66.21
CDX89799 Canola extracellular 67.07 64.27
CDY61137 Canola extracellular 66.59 63.81
CDY46471 Canola endoplasmic reticulum, extracellular 67.8 63.78
CDX86615 Canola endoplasmic reticulum, extracellular, golgi 66.34 63.57
CDY15517 Canola endoplasmic reticulum, extracellular, golgi 66.34 63.57
CDY53564 Canola endoplasmic reticulum, extracellular, vacuole 67.55 61.32
CDY01151 Canola endoplasmic reticulum, extracellular, vacuole 67.07 61.28
CDY18738 Canola endoplasmic reticulum, extracellular 67.31 58.4
CDY66697 Canola endoplasmic reticulum, golgi 61.99 57.27
CDY06557 Canola extracellular 53.51 57.11
CDX77400 Canola endoplasmic reticulum, extracellular 67.8 56.91
CDX77470 Canola golgi, plasma membrane 62.95 56.64
CDY20748 Canola extracellular 53.03 56.44
CDX82902 Canola endoplasmic reticulum, extracellular, vacuole 44.31 55.96
CDX98092 Canola extracellular 46.73 54.21
CDY30040 Canola extracellular 46.73 54.21
CDX98091 Canola extracellular 46.73 52.02
CDY30041 Canola extracellular 46.49 51.75
CDX70244 Canola vacuole 54.96 51.47
CDX78152 Canola extracellular 59.08 51.26
CDX73573 Canola extracellular 58.84 51.05
CDX79122 Canola extracellular 49.15 50.62
CDX67560 Canola plasma membrane 59.81 50.41
CDY27438 Canola extracellular 49.15 49.75
CDX76388 Canola extracellular 48.91 49.51
CDY07515 Canola endoplasmic reticulum, extracellular, vacuole 57.63 48.37
CDX67615 Canola endoplasmic reticulum, extracellular, vacuole 56.9 47.86
CDY28691 Canola endoplasmic reticulum, extracellular, vacuole 54.0 47.55
CDY56964 Canola endoplasmic reticulum, extracellular, vacuole 56.42 47.36
CDX74293 Canola endoplasmic reticulum, extracellular 53.51 46.92
CDX91953 Canola endoplasmic reticulum, extracellular 53.51 46.92
CDX70590 Canola endoplasmic reticulum, extracellular 53.75 46.74
CDX78607 Canola endoplasmic reticulum, extracellular 53.75 46.74
CDY11284 Canola extracellular, golgi 57.63 46.67
CDY17432 Canola extracellular 51.33 46.19
CDY04133 Canola extracellular 50.85 45.75
CDY63769 Canola extracellular 53.03 45.72
CDX85564 Canola extracellular 52.3 45.67
CDX73426 Canola endoplasmic reticulum, extracellular, vacuole 57.14 45.65
CDY68729 Canola endoplasmic reticulum, extracellular, plasma membrane 50.61 45.63
CDY58428 Canola endoplasmic reticulum, golgi, plastid 56.66 45.44
CDX96854 Canola endoplasmic reticulum, extracellular, plasma membrane 50.12 45.2
CDY41382 Canola endoplasmic reticulum, golgi 57.38 44.97
CDY13312 Canola plasma membrane 58.35 44.96
CDY41679 Canola endoplasmic reticulum, plasma membrane 49.64 44.86
CDY09356 Canola extracellular 49.15 44.42
CDY45254 Canola endoplasmic reticulum 49.15 44.32
CDX69550 Canola endoplasmic reticulum, extracellular 53.51 44.29
CDY66593 Canola endoplasmic reticulum, extracellular 53.51 44.29
CDY03043 Canola extracellular 49.15 44.23
CDY45202 Canola extracellular 49.15 44.23
CDY39314 Canola extracellular 48.91 44.01
CDX81636 Canola endoplasmic reticulum 49.15 41.94
CDY53552 Canola extracellular 50.12 41.82
CDY70492 Canola endoplasmic reticulum, extracellular 0.73 5.45
CDX81635 Canola mitochondrion, nucleus 0.73 1.97
CDX96858 Canola mitochondrion, nucleus 0.73 1.97
CDY04136 Canola mitochondrion, nucleus 0.73 1.97
CDY09355 Canola mitochondrion, nucleus 0.73 1.97
CDY41678 Canola mitochondrion, nucleus 0.73 1.97
CDY45199 Canola mitochondrion, nucleus 0.73 1.97
CDY45253 Canola mitochondrion, nucleus 0.73 1.97
CDY53553 Canola mitochondrion, nucleus 0.73 1.97
CDY66531 Canola mitochondrion, nucleus 0.73 1.97
Protein Annotations
KEGG:00040+4.2.2.2Gene3D:2.160.20.10MapMan:21.3.5.2GO:A0A078HUW6UniProt:A0A078HUW6InterPro:AmbAllergen
EnsemblPlants:CDY41506ProteinID:CDY41506ProteinID:CDY41506.1GO:GO:0003674GO:GO:0003824GO:GO:0005488
GO:GO:0005975GO:GO:0008150GO:GO:0008152GO:GO:0009056GO:GO:0009987GO:GO:0016829
GO:GO:0030570GO:GO:0045490GO:GO:0046872EnsemblPlantsGene:GSBRNA2T00073119001InterPro:IPR012334PFAM:PF00544
PRINTS:PR00807PANTHER:PTHR31683PANTHER:PTHR31683:SF28InterPro:Pec_lyaseInterPro:Pectin_lyas_foldInterPro:Pectin_lyase_fold/virulence
SMART:SM00656SUPFAM:SSF51126SignalP:SignalP-TMTMHMM:TMhelixUniPathway:UPA00545UniParc:UPI0004EEB253
SEG:seg:::::
Description
BnaA06g22590DPectate lyase [Source:UniProtKB/TrEMBL;Acc:A0A078HUW6]
Coordinates
chrLK032499:-:49860..51990
Molecular Weight (calculated)
45773.7 Da
IEP (calculated)
6.410
GRAVY (calculated)
-0.363
Length
413 amino acids
Sequence
(BLAST)
001: MNTMLNSSYA SFALIFLYCI FFFALALSSP VSDPELIVAE VHRKINESIS RRNLGYFSCE TGNPIDDCWR CDKDWEKNRK RLADCGIGFG KNAIGGRDGE
101: IYVVTDPGND DPVNPKPGTL RYAVIQDEPL WIIFSRDMTI QLKEELIMNS FKTLDGRGAS VHISGGPCIT IQYVTNIIIH GLHIHDCKQG GNTDVRDSPE
201: HYGWRTISDG DGVSIFGGSH VWVDHCSLSN CNDGLIDAIR GSTAITISNN YLTHHNKVML LGHSDTYEQD KNMQVTIAFN HFGEGLVQRM PRCRHGYFHV
301: VNNDYTHWEM YAIGGSANPT INSQGNRFLA PDNSFSKEVT KHEDAPESEW SHWNWRSEGD LMLNGAFFTL SGAGPTKSSS YSRASSLAAR PSSNVGEITI
401: SSGALSCKKG SHC
Best Arabidopsis Sequence Match ( AT5G63180.1 )
(BLAST)
001: MFRPNSLLIP SNLSTTKSQR NTMLNSSYLS FALIFFCCIL FSALASSLPV SDPELVVEEV HRKINESISR RKLGFFSCGS GNPIDDCWRC DKDWEKNRKR
101: LADCGIGFGK NAIGGRDGEI YVVTDPGNDD PVNPRPGTLR YAVIQDEPLW IIFKRDMTIQ LKEELIMNSF KTLDGRGASV HISGGPCITI QYVTNIIIHG
201: LHIHDCKQGG NTYVRDSPEH YGYRTVSDGD GVSIFGGSHV WVDHCSLSNC NDGLIDAIRG STAITISNNY LTHHNKVMLL GHSDTYEQDK NMQVTIAFNH
301: FGEGLVQRMP RCRHGYFHVV NNDYTHWEMY AIGGSANPTI NSQGNRFLAP DDSSSKEVTK HEDAPEDEWR NWNWRSEGDL LLNGAFFTYS GAGPAKSSSY
401: SKASSLAARP SSHVGEITIA SGALSCKRGS HC
Arabidopsis Description
Probable pectate lyase 22 [Source:UniProtKB/Swiss-Prot;Acc:Q93Z25]
SUBAcon: [plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.