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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular

Predictor Summary:
  • extracellular 7
  • endoplasmic reticulum 5
  • vacuole 5
  • plasma membrane 6
  • golgi 5
Predictors GFP MS/MS Papers
Winner Takes All:extracellular
Any Predictor:secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:extracellular
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plasma membrane
YLoc:extracellular
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra006976.1-P Field mustard cytosol 94.33 98.25
CDX78152 Canola extracellular 98.11 98.11
CDX67560 Canola plasma membrane 91.39 88.78
AT3G53190.1 Thale cress extracellular 89.29 87.99
CDY13312 Canola plasma membrane 90.34 80.22
KRH67761 Soybean endoplasmic reticulum, extracellular, vacuole 72.48 73.4
KRH19954 Soybean endoplasmic reticulum, extracellular, plasma membrane 68.91 68.76
PGSC0003DMT400009869 Potato cytosol 61.34 68.54
VIT_08s0007g04820.t01 Wine grape plastid 69.96 68.1
Solyc09g008380.2.1 Tomato nucleus 67.02 66.05
CDY70583 Canola cytosol 31.09 60.91
CDY18330 Canola cytosol 18.28 59.59
CDY24847 Canola endoplasmic reticulum, extracellular 50.63 59.36
CDY34310 Canola endoplasmic reticulum, vacuole 50.63 59.36
CDY03419 Canola endoplasmic reticulum, extracellular 50.42 59.11
CDY08948 Canola endoplasmic reticulum, extracellular 50.42 59.11
CDY41506 Canola endoplasmic reticulum, extracellular, vacuole 51.05 58.84
CDX92652 Canola endoplasmic reticulum, extracellular 50.0 58.62
CDY11033 Canola endoplasmic reticulum, extracellular 50.0 58.62
CDY32557 Canola extracellular 50.0 58.62
TraesCS1B01G161000.1 Wheat endoplasmic reticulum, extracellular, plasma membrane 58.61 58.61
CDY05305 Canola endoplasmic reticulum, extracellular, vacuole 51.05 58.41
CDY12666 Canola extracellular 49.79 58.37
TraesCS1D01G142400.1 Wheat endoplasmic reticulum, extracellular, plasma membrane 58.61 58.37
TraesCS1A01G143600.1 Wheat extracellular 58.82 58.33
CDY28857 Canola extracellular 49.79 58.23
CDY56520 Canola extracellular 49.79 58.23
CDY24654 Canola endoplasmic reticulum, extracellular, vacuole 50.84 58.17
CDY33938 Canola extracellular 50.84 58.03
CDY01846 Canola endoplasmic reticulum, extracellular, vacuole 49.37 57.88
CDY05655 Canola extracellular 50.63 57.79
CDY56220 Canola endoplasmic reticulum, extracellular, vacuole 49.16 57.64
CDX86615 Canola endoplasmic reticulum, extracellular, golgi 52.1 57.54
CDY15517 Canola endoplasmic reticulum, extracellular, golgi 52.1 57.54
CDX70244 Canola vacuole 53.15 57.37
CDX89799 Canola extracellular 51.89 57.31
CDY19932 Canola extracellular 50.21 57.18
CDY56668 Canola extracellular 50.21 57.18
CDY61137 Canola extracellular 51.68 57.08
KXG38421 Sorghum extracellular 57.77 57.05
CDX67615 Canola endoplasmic reticulum, extracellular, vacuole 58.61 56.82
CDY16732 Canola endoplasmic reticulum, golgi 51.05 56.78
CDY48132 Canola endoplasmic reticulum, golgi 50.84 56.54
CDY07515 Canola endoplasmic reticulum, extracellular, vacuole 58.4 56.5
GSMUA_Achr4P25120_001 Banana extracellular 52.94 56.38
HORVU1Hr1G038220.7 Barley endoplasmic reticulum, extracellular 57.56 56.26
Zm00001d032806_P001 Maize cytosol, plastid 51.05 56.25
CDX83690 Canola endoplasmic reticulum, extracellular, vacuole 48.53 56.07
CDY01151 Canola endoplasmic reticulum, extracellular, vacuole 52.94 55.75
Os10t0457200-01 Rice plasma membrane 57.35 55.6
CDY01119 Canola endoplasmic reticulum, extracellular 50.63 55.4
CDY56964 Canola endoplasmic reticulum, extracellular, vacuole 57.14 55.28
CDY47327 Canola endoplasmic reticulum, extracellular 50.21 55.2
CDY53564 Canola endoplasmic reticulum, extracellular, vacuole 52.73 55.16
CDY00156 Canola extracellular, plastid 47.69 55.1
CDY20049 Canola plastid, vacuole 47.69 55.1
CDY46471 Canola endoplasmic reticulum, extracellular 49.79 53.99
CDY03964 Canola extracellular 46.43 53.64
CDY65626 Canola golgi 50.84 53.3
CDX73426 Canola endoplasmic reticulum, extracellular, vacuole 57.77 53.19
CDY18738 Canola endoplasmic reticulum, extracellular 52.94 52.94
CDY66697 Canola endoplasmic reticulum, golgi 49.58 52.8
CDY34149 Canola extracellular 39.29 52.09
CDY06557 Canola extracellular 42.02 51.68
CDX77470 Canola golgi, plasma membrane 49.79 51.63
CDY20748 Canola extracellular 42.02 51.55
CDY11284 Canola extracellular, golgi 55.04 51.37
CDX82902 Canola endoplasmic reticulum, extracellular, vacuole 35.08 51.07
CDY41382 Canola endoplasmic reticulum, golgi 56.09 50.66
CDY58428 Canola endoplasmic reticulum, golgi, plastid 54.2 50.1
CDY30040 Canola extracellular 37.18 49.72
GSMUA_Achr1P03320_001 Banana plasma membrane 53.36 49.71
CDX98092 Canola extracellular 36.97 49.44
CDX98091 Canola extracellular 38.24 49.06
CDX77400 Canola endoplasmic reticulum, extracellular 50.42 48.78
CDY30041 Canola extracellular 37.6 48.25
CDX79122 Canola extracellular 39.29 46.63
CDY27438 Canola extracellular 39.5 46.08
CDX76388 Canola extracellular 39.08 45.59
CDX96854 Canola endoplasmic reticulum, extracellular, plasma membrane 42.86 44.54
CDY68729 Canola endoplasmic reticulum, extracellular, plasma membrane 42.86 44.54
CDY17432 Canola extracellular 42.44 44.01
CDY45254 Canola endoplasmic reticulum 42.23 43.89
CDY03043 Canola extracellular 42.23 43.79
CDY04133 Canola extracellular 42.23 43.79
CDY45202 Canola extracellular 42.02 43.57
CDY39314 Canola extracellular 41.81 43.36
CDY28691 Canola endoplasmic reticulum, extracellular, vacuole 42.65 43.28
CDY41679 Canola endoplasmic reticulum, plasma membrane 41.18 42.89
CDX74293 Canola endoplasmic reticulum, extracellular 42.44 42.89
CDX91953 Canola endoplasmic reticulum, extracellular 42.44 42.89
CDX70590 Canola endoplasmic reticulum, extracellular 42.65 42.74
CDY09356 Canola extracellular 40.97 42.67
CDX81636 Canola endoplasmic reticulum 43.28 42.56
CDX78607 Canola endoplasmic reticulum, extracellular 42.23 42.32
CDY53552 Canola extracellular 43.7 42.02
CDY63769 Canola extracellular 41.81 41.54
CDX85564 Canola extracellular 41.18 41.44
CDX69550 Canola endoplasmic reticulum, extracellular 42.86 40.88
CDY66593 Canola endoplasmic reticulum, extracellular 42.86 40.88
CDY70492 Canola endoplasmic reticulum, extracellular 1.47 12.73
CDX81635 Canola mitochondrion, nucleus 1.26 3.95
CDX96858 Canola mitochondrion, nucleus 1.26 3.95
CDY04136 Canola mitochondrion, nucleus 1.26 3.95
CDY09355 Canola mitochondrion, nucleus 1.26 3.95
CDY41678 Canola mitochondrion, nucleus 1.26 3.95
CDY45199 Canola mitochondrion, nucleus 1.26 3.95
CDY45253 Canola mitochondrion, nucleus 1.26 3.95
CDY53553 Canola mitochondrion, nucleus 1.26 3.95
CDY66531 Canola mitochondrion, nucleus 1.26 3.95
Protein Annotations
KEGG:00040+4.2.2.2Gene3D:2.160.20.10MapMan:21.3.5.2GO:A0A078CF52InterPro:AmbAllergenEnsemblPlants:CDX73573
ProteinID:CDX73573ProteinID:CDX73573.1ncoils:CoilGO:GO:0005975GO:GO:0008150GO:GO:0008152
GO:GO:0009056GO:GO:0009987GO:GO:0045490EnsemblPlantsGene:GSBRNA2T00109123001InterPro:IPR012334PFAM:PF00544
PRINTS:PR00807PANTHER:PTHR31683PANTHER:PTHR31683:SF21InterPro:Pec_lyaseInterPro:Pectin_lyas_foldInterPro:Pectin_lyase_fold/virulence
SMART:SM00656SUPFAM:SSF51126SignalP:SignalP-noTMTMHMM:TMhelixUniPathway:UPA00545UniParc:UPI0004EC938E
SEG:seg:::::
Description
BnaC08g24300D
Coordinates
chrLK031799:-:1325989..1329924
Molecular Weight (calculated)
53010.9 Da
IEP (calculated)
6.501
GRAVY (calculated)
-0.241
Length
476 amino acids
Sequence
(BLAST)
001: MMLQRSCIVL FSLSLFVPHM GFAMLNKTLL LIPHPDPELV AHDVHWRVNA SIWRRQAMDT TDQAGSNQCF TGNPIDDCWK CDTNWPNNRQ RLADCGIGFG
101: QYALGGKGGR FYFVTDSSDD DVVDPKPGTL RYGVIQVEPL WIVFPSNMMI KLKHELIFNS YKTLDGRGAN VHIVGGGCIT LQYVSNIIIH NIHIHHCHPS
201: GNTNIRSSPT HYGLRTESDG DGISIFGSKD IWIDHCSLSR CKDGLIDAVM GSTGITISNN FFSHHNEVML LGHSDHYEPD SGMQVTIAFN HFGDKLVQRM
301: PRCRRGYIHV VNNDFTQWEM YAIGGSGNPT INSQGNRYTA PTNPFAKEVT KRVETPDGDW KGWNWRSEGD ILVNGAFFVA SGEGAEMRYE KAYSVDPKSA
401: AFIDQITFHC GVLGVGGRNN NLGMWTTTGS EGSGGLDSYN DYNDEMSGTC STNRLSLSVI VIAFMFNLMS YLFMLL
Best Arabidopsis Sequence Match ( AT3G53190.1 )
(BLAST)
001: MMLQRSCIVL FFSLFLLVPQ MVFSMLNRTL LLIPHPDPEL VAYQVQWKVN ASITRRQALD TTDQAGSTPC ITGNPIDDCW KCDPNWPNNR QGLADCGIGF
101: GQYALGGKGG QFYFVTDSSD DDAVNPKPGT LRYGVIQEEP LWIVFPSNMM IKLKQELIFN SYKTLDGRGA NVHIVGGGCI TLQYVSNIII HNIHIHHCYQ
201: SGNTNVRSSP THYGFRTKSD GDGISIFGSK DIWIDHCSLS RCKDGLIDAV MGSTGITISN NFFSHHNEVM LLGHSDHYEP DSGMQVTIAF NHFGEKLIQR
301: MPRCRRGYIH VVNNDFTQWE MYAIGGSGNP TINSQGNRYT APTNPFAKEV TKRVETPDGD WKGWNWRSEG DILVNGAFFV ASGEGAEMRY EKAYSVEPKS
401: ASFITQITFH SGVLGVGGRN NNLGMWTTTG SEGTSGLDSY NDYTDEMSGA GSTNRLSFSV LVFLLSSISY LVVFTSSTQM FML
Arabidopsis Description
Pectate lyase [Source:UniProtKB/TrEMBL;Acc:Q56XU8]
SUBAcon: [extracellular]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.