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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum

Predictor Summary:
  • extracellular 6
  • endoplasmic reticulum 7
  • vacuole 5
  • plasma membrane 5
  • golgi 5
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum
Any Predictor:secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:endoplasmic reticulum
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:endoplasmic reticulum
YLoc:extracellular
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY39314 Canola extracellular 98.69 98.47
CDX96854 Canola endoplasmic reticulum, extracellular, plasma membrane 85.59 85.59
CDY68729 Canola endoplasmic reticulum, extracellular, plasma membrane 85.37 85.37
CDX81636 Canola endoplasmic reticulum 81.0 76.65
CDY53552 Canola extracellular 82.53 76.36
CDY09356 Canola extracellular 73.8 73.96
CDY41679 Canola endoplasmic reticulum, plasma membrane 73.36 73.52
CDY04133 Canola extracellular 71.83 71.68
CDY17432 Canola extracellular 71.83 71.68
CDY45202 Canola extracellular 71.83 71.68
CDY03043 Canola extracellular 71.62 71.46
CDY18330 Canola cytosol 16.38 51.37
CDY12666 Canola extracellular 45.41 51.23
CDY32557 Canola extracellular 45.41 51.23
CDY56220 Canola endoplasmic reticulum, extracellular, vacuole 45.2 50.99
CDY28857 Canola extracellular 45.2 50.86
CDX74293 Canola endoplasmic reticulum, extracellular 52.18 50.74
CDX91953 Canola endoplasmic reticulum, extracellular 52.18 50.74
CDY56520 Canola extracellular 44.98 50.61
CDY01846 Canola endoplasmic reticulum, extracellular, vacuole 44.76 50.49
CDY28691 Canola endoplasmic reticulum, extracellular, vacuole 51.53 50.32
CDY70583 Canola cytosol 26.64 50.21
KRH11474 Soybean extracellular 40.83 50.13
CDY08948 Canola endoplasmic reticulum, extracellular 44.32 50.0
CDY20049 Canola plastid, vacuole 44.98 50.0
CDY24847 Canola endoplasmic reticulum, extracellular 44.32 50.0
CDY34310 Canola endoplasmic reticulum, vacuole 44.32 50.0
CDY63769 Canola extracellular 52.18 49.9
CDX70590 Canola endoplasmic reticulum, extracellular 51.75 49.89
CDY00156 Canola extracellular, plastid 44.76 49.76
CDX92652 Canola endoplasmic reticulum, extracellular 44.1 49.75
CDY03419 Canola endoplasmic reticulum, extracellular 44.1 49.75
CDX85564 Canola extracellular 51.31 49.68
CDY11033 Canola endoplasmic reticulum, extracellular 43.89 49.51
CDY05305 Canola endoplasmic reticulum, extracellular, vacuole 44.76 49.28
CDX78607 Canola endoplasmic reticulum, extracellular 51.09 49.26
CDY41506 Canola endoplasmic reticulum, extracellular, vacuole 44.32 49.15
CDY24654 Canola endoplasmic reticulum, extracellular, vacuole 44.54 49.04
CDY33938 Canola extracellular 44.54 48.92
CDX83690 Canola endoplasmic reticulum, extracellular, vacuole 43.89 48.79
CDX69550 Canola endoplasmic reticulum, extracellular 53.06 48.7
CDY05655 Canola extracellular 44.32 48.68
CDY30040 Canola extracellular 37.77 48.6
CDY56668 Canola extracellular 44.32 48.56
CDY03964 Canola extracellular 43.67 48.54
CDY46471 Canola endoplasmic reticulum, extracellular 46.51 48.52
CDY66593 Canola endoplasmic reticulum, extracellular 52.84 48.5
CDY19932 Canola extracellular 44.1 48.33
CDX98092 Canola extracellular 37.55 48.31
CDX89799 Canola extracellular 45.41 48.26
CDY06557 Canola extracellular 40.61 48.06
CDX86615 Canola endoplasmic reticulum, extracellular, golgi 45.2 48.03
CDY15517 Canola endoplasmic reticulum, extracellular, golgi 45.2 48.03
CDY61137 Canola extracellular 45.2 48.03
CDY34149 Canola extracellular 37.55 47.91
CDY47327 Canola endoplasmic reticulum, extracellular 45.2 47.81
PGSC0003DMT400042395 Potato extracellular 39.74 47.77
CDX98091 Canola extracellular 38.65 47.71
CDY20748 Canola extracellular 40.39 47.68
CDY48132 Canola endoplasmic reticulum, golgi 44.32 47.43
CDY16732 Canola endoplasmic reticulum, golgi 44.1 47.2
CDY30041 Canola extracellular 38.21 47.17
CDY01119 Canola endoplasmic reticulum, extracellular 44.54 46.9
KRH02031 Soybean extracellular 40.61 46.73
VIT_10s0116g01160.t01 Wine grape endoplasmic reticulum, extracellular 38.86 46.72
CDY01151 Canola endoplasmic reticulum, extracellular, vacuole 46.07 46.68
CDY53564 Canola endoplasmic reticulum, extracellular, vacuole 46.07 46.37
CDX82902 Canola endoplasmic reticulum, extracellular, vacuole 32.97 46.18
KRH36488 Soybean extracellular 39.96 46.1
KRH36487 Soybean extracellular 28.38 45.61
CDY65626 Canola golgi 44.1 44.49
CDY18738 Canola endoplasmic reticulum, extracellular 46.07 44.33
CDX79122 Canola extracellular 38.65 44.14
CDY27438 Canola extracellular 39.3 44.12
CDY66697 Canola endoplasmic reticulum, golgi 43.01 44.07
CDX76388 Canola extracellular 39.08 43.87
CDX77470 Canola golgi, plasma membrane 43.45 43.36
CDX77400 Canola endoplasmic reticulum, extracellular 46.29 43.09
CDX73573 Canola extracellular 43.89 42.23
CDX78152 Canola extracellular 43.89 42.23
CDX70244 Canola vacuole 40.61 42.18
CDY07515 Canola endoplasmic reticulum, extracellular, vacuole 43.89 40.85
CDX67560 Canola plasma membrane 43.67 40.82
CDX67615 Canola endoplasmic reticulum, extracellular, vacuole 43.67 40.73
CDY56964 Canola endoplasmic reticulum, extracellular, vacuole 43.67 40.65
CDX73426 Canola endoplasmic reticulum, extracellular, vacuole 43.23 38.3
CDY11284 Canola extracellular, golgi 42.14 37.84
CDY58428 Canola endoplasmic reticulum, golgi, plastid 42.14 37.48
CDY13312 Canola plasma membrane 43.45 37.13
CDY41382 Canola endoplasmic reticulum, golgi 42.14 36.62
Solyc02g080910.2.1 Tomato extracellular 40.39 24.37
CDY70492 Canola endoplasmic reticulum, extracellular 1.31 10.91
CDX81635 Canola mitochondrion, nucleus 0.44 1.32
CDX96858 Canola mitochondrion, nucleus 0.44 1.32
CDY04136 Canola mitochondrion, nucleus 0.44 1.32
CDY09355 Canola mitochondrion, nucleus 0.44 1.32
CDY41678 Canola mitochondrion, nucleus 0.44 1.32
CDY45199 Canola mitochondrion, nucleus 0.44 1.32
CDY45253 Canola mitochondrion, nucleus 0.44 1.32
CDY53553 Canola mitochondrion, nucleus 0.44 1.32
CDY66531 Canola mitochondrion, nucleus 0.44 1.32
Protein Annotations
KEGG:00040+4.2.2.2Gene3D:2.160.20.10MapMan:21.3.5.2GO:A0A078I768UniProt:A0A078I768InterPro:AmbAllergen
EnsemblPlants:CDY45254ProteinID:CDY45254ProteinID:CDY45254.1GO:GO:0003674GO:GO:0003824GO:GO:0005488
GO:GO:0005975GO:GO:0008150GO:GO:0008152GO:GO:0009056GO:GO:0009987GO:GO:0016829
GO:GO:0030570GO:GO:0045490GO:GO:0046872EnsemblPlantsGene:GSBRNA2T00081694001InterPro:IPR012334PFAM:PF00544
PFAM:PF04431PRINTS:PR00807PANTHER:PTHR31683PANTHER:PTHR31683:SF14InterPro:Pec_lyaseInterPro:Pec_lyase_N
InterPro:Pectin_lyas_foldInterPro:Pectin_lyase_fold/virulenceSMART:SM00656SUPFAM:SSF51126SignalP:SignalP-noTMTMHMM:TMhelix
UniPathway:UPA00545UniParc:UPI0004EE5AB4::::
Description
BnaA06g09240DPectate lyase [Source:UniProtKB/TrEMBL;Acc:A0A078I768]
Coordinates
chrLK032619:-:7975..9980
Molecular Weight (calculated)
51526.8 Da
IEP (calculated)
9.778
GRAVY (calculated)
-0.370
Length
458 amino acids
Sequence
(BLAST)
001: MAAAFLNIGS YIFVFLLSSF ATLAPQVQAN IAVFDDYWTQ RQGDALKQTL ASFDPYPLNV TNHLNYHVAL ALDTTESINS TRRELSQARR GRKMQNRGKC
101: VAHNPIDKCW RCDRDWEKNR KKLAVCALGF GRRTTGGKDG PIYVVTDASD DELISPRPGT LRHAVTRDGP LWIIFARSMV IKLQQELMMT SDKTIDGRGA
201: RVYIMGGSGL TLQFVNNVII HNIYIKQIVP ANGGLIRDSE QHIGLRTRSD GDGINLFGAT NVWIDHVSMT RCSDGMIDAI LGSTAVTVSN SHFTDHQEVM
301: LFGANDKHEI DKKMQITVAF NHFGKRLEQR MPRVRFGTIH VVNNDYTHWE MYAIGGNMNP TIISHGNRFI APPNEQAKQI TKREYTSYVD WKLWNWQSEG
401: DYFLNGAYFV QSGKPNAWSP KPKNPIPNKF AIRPKPGTMV RKLTMDAGVL GCKQGQAC
Best Arabidopsis Sequence Match ( AT1G14420.1 )
(BLAST)
001: MAAAFLNLGG YVFVFFSSFL AIVAPQVRGN VAVFDSYWTQ RQSDALKQTI GSYDPHPLNV TNHFNYHVNI AVDASESRND TRRELTQVRS GRKTHKSSGK
101: CLAYNPIDNC WRCDRNWANN RKKLADCVLG FGRRTTGGKD GPIYVVKDAS DNDLINPKPG TLRHAVTRDG PLWIIFARSM IIKLQQELMI TSDKTIDGRG
201: ARVYIMEGAG LTLQFVNNVI IHNIYVKHIV PGNGGLIRDS EAHIGLRTKS DGDGISLFGA TNIWIDHVSM TRCADGMIDA IDGSTAVTIS NSHFTDHQEV
301: MLFGARDEHV IDKKMQITVA FNHFGKRLEQ RMPRCRYGTI HVVNNDYTHW EMYAIGGNMN PTIISQGNRF IAPPNEEAKQ ITKREYTPYG EWKSWNWQSE
401: GDYFLNGAYF VQSGKANAWS SKPKTPLPNK FTIRPKPGTM VRKLTMDAGV LGCKLGEAC
Arabidopsis Description
AT59Probable pectate lyase 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9M9S2]
SUBAcon: [endoplasmic reticulum]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.