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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular, endoplasmic reticulum

Predictor Summary:
  • extracellular 6
  • golgi 5
  • plasma membrane 5
  • endoplasmic reticulum 6
  • vacuole 5
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum, extracellular
Any Predictor:secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:endoplasmic reticulum
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plastid
YLoc:extracellular
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra032696.1-P Field mustard endoplasmic reticulum, extracellular 94.94 100.0
CDY47327 Canola endoplasmic reticulum, extracellular 97.93 98.38
AT4G13210.2 Thale cress endoplasmic reticulum, extracellular 90.8 90.18
CDY46471 Canola endoplasmic reticulum, extracellular 80.46 79.73
CDY24654 Canola endoplasmic reticulum, extracellular, vacuole 74.71 78.12
CDY05305 Canola endoplasmic reticulum, extracellular, vacuole 74.71 78.12
CDY19932 Canola extracellular 74.71 77.75
CDY33938 Canola extracellular 74.48 77.7
CDY05655 Canola extracellular 74.48 77.7
CDY56668 Canola extracellular 74.25 77.27
CDY18330 Canola cytosol 24.6 73.29
CDY15517 Canola endoplasmic reticulum, extracellular, golgi 71.03 71.69
CDX89799 Canola extracellular 70.8 71.46
CDX86615 Canola endoplasmic reticulum, extracellular, golgi 70.8 71.46
CDX77400 Canola endoplasmic reticulum, extracellular 80.69 71.34
CDY61137 Canola extracellular 70.57 71.23
CDY11033 Canola endoplasmic reticulum, extracellular 66.44 71.18
CDY24847 Canola endoplasmic reticulum, extracellular 66.21 70.94
CDX92652 Canola endoplasmic reticulum, extracellular 66.21 70.94
CDY34310 Canola endoplasmic reticulum, vacuole 65.98 70.69
CDY08948 Canola endoplasmic reticulum, extracellular 65.98 70.69
CDY03419 Canola endoplasmic reticulum, extracellular 65.98 70.69
CDY41506 Canola endoplasmic reticulum, extracellular, vacuole 66.21 69.73
CDY70583 Canola cytosol 38.85 69.55
CDY12666 Canola extracellular 64.83 69.46
CDY32557 Canola extracellular 64.6 69.21
CDY56520 Canola extracellular 64.37 68.8
CDY28857 Canola extracellular 63.91 68.3
CDY56220 Canola endoplasmic reticulum, extracellular, vacuole 63.68 68.23
CDY01846 Canola endoplasmic reticulum, extracellular, vacuole 63.45 67.98
CDY01151 Canola endoplasmic reticulum, extracellular, vacuole 69.89 67.26
CDY53564 Canola endoplasmic reticulum, extracellular, vacuole 69.89 66.81
CDY16732 Canola endoplasmic reticulum, golgi 64.6 65.65
CDY48132 Canola endoplasmic reticulum, golgi 64.6 65.65
CDX83690 Canola endoplasmic reticulum, extracellular, vacuole 60.69 64.08
CDY18738 Canola endoplasmic reticulum, extracellular 70.11 64.08
CDY66697 Canola endoplasmic reticulum, golgi 64.83 63.09
CDY65626 Canola golgi 65.75 63.0
CDY00156 Canola extracellular, plastid 59.54 62.86
CDY20049 Canola plastid, vacuole 59.31 62.62
CDY03964 Canola extracellular 59.08 62.38
CDY34149 Canola extracellular 50.57 61.28
CDX77470 Canola golgi, plasma membrane 64.6 61.22
CDY06557 Canola extracellular 48.74 54.78
CDY20748 Canola extracellular 48.74 54.64
CDX82902 Canola endoplasmic reticulum, extracellular, vacuole 40.0 53.21
CDX98091 Canola extracellular 45.06 52.83
CDX98092 Canola extracellular 42.76 52.25
CDY30041 Canola extracellular 44.37 52.02
CDY30040 Canola extracellular 42.53 51.97
CDX70244 Canola vacuole 52.64 51.93
CDX78152 Canola extracellular 55.86 51.05
CDX73573 Canola extracellular 55.4 50.63
CDX67560 Canola plasma membrane 56.78 50.41
CDX79122 Canola extracellular 45.29 49.13
CDY27438 Canola extracellular 45.52 48.53
CDX76388 Canola extracellular 45.29 48.28
CDY07515 Canola endoplasmic reticulum, extracellular, vacuole 54.02 47.76
CDX78607 Canola endoplasmic reticulum, extracellular 51.95 47.58
CDY56964 Canola endoplasmic reticulum, extracellular, vacuole 53.79 47.56
CDX67615 Canola endoplasmic reticulum, extracellular, vacuole 53.56 47.45
CDX74293 Canola endoplasmic reticulum, extracellular 51.26 47.35
CDX91953 Canola endoplasmic reticulum, extracellular 51.26 47.35
CDY28691 Canola endoplasmic reticulum, extracellular, vacuole 51.03 47.33
CDX70590 Canola endoplasmic reticulum, extracellular 51.49 47.16
CDY45202 Canola extracellular 49.43 46.84
CDY03043 Canola extracellular 49.43 46.84
CDY63769 Canola extracellular 51.49 46.76
CDX85564 Canola extracellular 50.8 46.72
CDY04133 Canola extracellular 49.2 46.62
CDY17432 Canola extracellular 49.2 46.62
CDY11284 Canola extracellular, golgi 54.48 46.47
CDY68729 Canola endoplasmic reticulum, extracellular, plasma membrane 48.28 45.85
CDX96854 Canola endoplasmic reticulum, extracellular, plasma membrane 47.82 45.41
CDY41382 Canola endoplasmic reticulum, golgi 54.94 45.35
CDX73426 Canola endoplasmic reticulum, extracellular, vacuole 53.79 45.26
CDY58428 Canola endoplasmic reticulum, golgi, plastid 53.56 45.24
CDY13312 Canola plasma membrane 55.63 45.15
CDY09356 Canola extracellular 47.36 45.08
CDY41679 Canola endoplasmic reticulum, plasma membrane 47.13 44.86
CDY45254 Canola endoplasmic reticulum 46.9 44.54
CDX69550 Canola endoplasmic reticulum, extracellular 51.03 44.49
CDY66593 Canola endoplasmic reticulum, extracellular 51.03 44.49
CDY39314 Canola extracellular 46.9 44.44
CDX81636 Canola endoplasmic reticulum 46.44 41.74
CDY53552 Canola extracellular 47.13 41.41
CDY70492 Canola endoplasmic reticulum, extracellular 2.3 18.18
CDY41678 Canola mitochondrion, nucleus 0.46 1.32
CDX81635 Canola mitochondrion, nucleus 0.46 1.32
CDY09355 Canola mitochondrion, nucleus 0.46 1.32
CDX96858 Canola mitochondrion, nucleus 0.46 1.32
CDY66531 Canola mitochondrion, nucleus 0.46 1.32
CDY45199 Canola mitochondrion, nucleus 0.46 1.32
CDY53553 Canola mitochondrion, nucleus 0.46 1.32
CDY04136 Canola mitochondrion, nucleus 0.46 1.32
CDY45253 Canola mitochondrion, nucleus 0.46 1.32
Protein Annotations
KEGG:00040+4.2.2.2Gene3D:2.160.20.10MapMan:21.3.5.2GO:A0A078EK69InterPro:AmbAllergenEnsemblPlants:CDY01119
ProteinID:CDY01119ProteinID:CDY01119.1GO:GO:0005975GO:GO:0008150GO:GO:0008152GO:GO:0009056
GO:GO:0009987GO:GO:0045490EnsemblPlantsGene:GSBRNA2T00111178001InterPro:IPR012334PFAM:PF00544PRINTS:PR00807
PANTHER:PTHR31683PANTHER:PTHR31683:SF34InterPro:Pec_lyaseInterPro:Pectin_lyas_foldInterPro:Pectin_lyase_fold/virulenceSMART:SM00656
SUPFAM:SSF51126SignalP:SignalP-noTMTMHMM:TMhelixUniPathway:UPA00545UniParc:UPI0004EDB0F9SEG:seg
Description
BnaA04g07000D
Coordinates
chrLK031924:+:130647..136555
Molecular Weight (calculated)
48330.6 Da
IEP (calculated)
9.045
GRAVY (calculated)
-0.319
Length
435 amino acids
Sequence
(BLAST)
001: MVIARTLSSV SATLIIILTL LVHVNGVQDT KELKPDQSSR NTSMTDYEWH EHAVKDPEEI AAMVDMKIRN STERRRLGYF SCSTGNPIDD CWRCDKKWHR
101: QRKRLASCAI GFGRNAVGGR DGRFYVVTDP SDHDPVKPKP GTLRYAVIQD RPLWIVFKRD MVITLSQELI MNSFKTIDGR GVNVHIAGGA CITIQYVTNI
201: IIHGVNIHDC KRTGNAMVRS SETHYGWRTM ADGDGISIFG SSHIWIDHNS MSNCADGLID AIMGSTAITI SNNYLTHHNE AILLGHTDSY TRDKMMQVTI
301: AYNHFGEGLI QRMPRLCRHG YFHVVNNDYT HWEMYAIGGS ANPTINSQGN RFLAPGNRFA KEVTKRVGAG KGEWNQWNWR SQGDLLLNGA YFTSSGAGAS
401: SSYARASSLA AKSSSLVGML TYSSGALKCR IGTPC
Best Arabidopsis Sequence Match ( AT4G13210.2 )
(BLAST)
001: MVVARTLFSI SATLIIFLAL FLHVNAVQET REPKHESSRN TSTVDNLSDG EWHEHAVKDP EEIAAMVDMS IRNSTYRRKL GFFSSCSTGN PIDDCWRCDK
101: KWHRRRKRLA DCAIGFGRNA VGGRDGRYYI VTDPSDHDPV TPKPGTLRYA VIQDEPLWIV FKRDMVITLS QELIMNSFKT IDGRGVNVHI AGGACLTVQY
201: VTNIIIHGIN IHDCKRTGNA MVRSSESHYG WRTMADGDGI SIFGSSHIWI DHNSLSSCAD GLIDAIMGST AITISNNYLT HHNEAILLGH TDSYTRDKMM
301: QVTIAYNHFG EGLIQRMPRC RHGYFHVVNN DYTHWEMYAI GGSANPTINS QGNRFLAPGN RFAKEVTKRV GAGKGEWNNW NWRSQGDLML NGAYFTSSGA
401: GASANYARAS SLAAKSSSLV GMLTSSSGAL KCRIGTLC
Arabidopsis Description
Putative pectate lyase 14 [Source:UniProtKB/Swiss-Prot;Acc:Q9SVQ6]
SUBAcon: [extracellular,endoplasmic reticulum]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.