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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular

Predictor Summary:
  • extracellular 7
  • endoplasmic reticulum 6
  • vacuole 5
  • plasma membrane 5
  • golgi 5
Predictors GFP MS/MS Papers
Winner Takes All:extracellular
Any Predictor:secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:endoplasmic reticulum
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:extracellular
YLoc:extracellular
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra036155.1-P Field mustard extracellular 98.8 98.8
CDY19932 Canola extracellular 98.8 98.8
CDY33938 Canola extracellular 94.26 94.48
CDY05655 Canola extracellular 93.78 94.0
AT5G48900.1 Thale cress extracellular 92.58 92.81
CDY05305 Canola endoplasmic reticulum, extracellular, vacuole 86.84 87.26
CDY24654 Canola endoplasmic reticulum, extracellular, vacuole 86.84 87.26
CDY18330 Canola cytosol 26.08 74.66
CDY01119 Canola endoplasmic reticulum, extracellular 77.27 74.25
CDY47327 Canola endoplasmic reticulum, extracellular 76.79 74.13
CDY61137 Canola extracellular 76.32 74.01
CDX89799 Canola extracellular 76.08 73.78
CDY46471 Canola endoplasmic reticulum, extracellular 77.27 73.58
CDY15517 Canola endoplasmic reticulum, extracellular, golgi 75.36 73.09
CDX86615 Canola endoplasmic reticulum, extracellular, golgi 74.4 72.16
CDY11033 Canola endoplasmic reticulum, extracellular 69.38 71.43
CDY34310 Canola endoplasmic reticulum, vacuole 69.14 71.18
CDY08948 Canola endoplasmic reticulum, extracellular 69.14 71.18
CDX92652 Canola endoplasmic reticulum, extracellular 69.14 71.18
CDY24847 Canola endoplasmic reticulum, extracellular 68.66 70.69
CDY03419 Canola endoplasmic reticulum, extracellular 68.66 70.69
CDY70583 Canola cytosol 40.43 69.55
CDY12666 Canola extracellular 67.22 69.21
CDY32557 Canola extracellular 66.99 68.97
CDY01151 Canola endoplasmic reticulum, extracellular, vacuole 74.4 68.81
CDY41506 Canola endoplasmic reticulum, extracellular, vacuole 67.94 68.77
CDY56520 Canola extracellular 66.75 68.55
CDY53564 Canola endoplasmic reticulum, extracellular, vacuole 74.4 68.35
CDY56220 Canola endoplasmic reticulum, extracellular, vacuole 66.27 68.23
CDY28857 Canola extracellular 66.27 68.06
CDY01846 Canola endoplasmic reticulum, extracellular, vacuole 66.03 67.98
CDY18738 Canola endoplasmic reticulum, extracellular 74.88 65.76
CDY16732 Canola endoplasmic reticulum, golgi 67.22 65.65
CDY48132 Canola endoplasmic reticulum, golgi 67.22 65.65
CDX77400 Canola endoplasmic reticulum, extracellular 77.03 65.45
CDX83690 Canola endoplasmic reticulum, extracellular, vacuole 63.4 64.32
CDY00156 Canola extracellular, plastid 62.92 63.84
CDY20049 Canola plastid, vacuole 62.68 63.59
CDY66697 Canola endoplasmic reticulum, golgi 67.94 63.53
CDY03964 Canola extracellular 62.2 63.11
CDX77470 Canola golgi, plasma membrane 68.42 62.31
CDY65626 Canola golgi 67.46 62.11
CDY34149 Canola extracellular 52.87 61.56
CDX82902 Canola endoplasmic reticulum, extracellular, vacuole 43.3 55.35
CDY06557 Canola extracellular 51.2 55.3
CDY20748 Canola extracellular 51.2 55.15
CDX98091 Canola extracellular 48.33 54.45
CDY30041 Canola extracellular 48.09 54.18
CDX98092 Canola extracellular 45.69 53.65
CDY30040 Canola extracellular 45.69 53.65
CDX70244 Canola vacuole 56.22 53.29
CDX79122 Canola extracellular 49.04 51.12
CDX78152 Canola extracellular 57.42 50.42
CDX73573 Canola extracellular 57.18 50.21
CDX67560 Canola plasma membrane 57.66 49.18
CDX67615 Canola endoplasmic reticulum, extracellular, vacuole 57.66 49.08
CDY27438 Canola extracellular 47.85 49.02
CDX76388 Canola extracellular 47.85 49.02
CDY07515 Canola endoplasmic reticulum, extracellular, vacuole 57.66 48.98
CDX78607 Canola endoplasmic reticulum, extracellular 55.5 48.84
CDX70590 Canola endoplasmic reticulum, extracellular 55.5 48.84
CDY56964 Canola endoplasmic reticulum, extracellular, vacuole 57.42 48.78
CDY63769 Canola extracellular 54.78 47.81
CDX85564 Canola extracellular 54.07 47.78
CDX91953 Canola endoplasmic reticulum, extracellular 53.35 47.35
CDX74293 Canola endoplasmic reticulum, extracellular 53.35 47.35
CDY28691 Canola endoplasmic reticulum, extracellular, vacuole 53.11 47.33
CDY11284 Canola extracellular, golgi 57.18 46.86
CDY68729 Canola endoplasmic reticulum, extracellular, plasma membrane 50.48 46.07
CDX73426 Canola endoplasmic reticulum, extracellular, vacuole 56.94 46.03
CDY58428 Canola endoplasmic reticulum, golgi, plastid 56.46 45.83
CDY41382 Canola endoplasmic reticulum, golgi 57.42 45.54
CDX69550 Canola endoplasmic reticulum, extracellular 54.31 45.49
CDX96854 Canola endoplasmic reticulum, extracellular, plasma membrane 49.76 45.41
CDY17432 Canola extracellular 49.76 45.32
CDY04133 Canola extracellular 49.76 45.32
CDY66593 Canola endoplasmic reticulum, extracellular 54.07 45.29
CDY45202 Canola extracellular 49.04 44.66
CDY03043 Canola extracellular 48.8 44.44
CDY45254 Canola endoplasmic reticulum 48.56 44.32
CDY39314 Canola extracellular 48.56 44.23
CDY13312 Canola plasma membrane 56.46 44.03
CDY41679 Canola endoplasmic reticulum, plasma membrane 47.61 43.54
CDY09356 Canola extracellular 47.61 43.54
CDY53552 Canola extracellular 50.0 42.22
CDX81636 Canola endoplasmic reticulum 48.8 42.15
CDY70492 Canola endoplasmic reticulum, extracellular 1.44 10.91
CDY66531 Canola mitochondrion, nucleus 0.48 1.32
CDY09355 Canola mitochondrion, nucleus 0.48 1.32
CDX96858 Canola mitochondrion, nucleus 0.48 1.32
CDY04136 Canola mitochondrion, nucleus 0.48 1.32
CDY53553 Canola mitochondrion, nucleus 0.48 1.32
CDX81635 Canola mitochondrion, nucleus 0.48 1.32
CDY45253 Canola mitochondrion, nucleus 0.48 1.32
CDY45199 Canola mitochondrion, nucleus 0.48 1.32
CDY41678 Canola mitochondrion, nucleus 0.48 1.32
Protein Annotations
KEGG:00040+4.2.2.2Gene3D:2.160.20.10MapMan:21.3.5.2GO:A0A078J2X9UniProt:A0A078J2X9InterPro:AmbAllergen
EnsemblPlants:CDY56668ProteinID:CDY56668ProteinID:CDY56668.1GO:GO:0003674GO:GO:0003824GO:GO:0005488
GO:GO:0005975GO:GO:0008150GO:GO:0008152GO:GO:0009056GO:GO:0009987GO:GO:0016829
GO:GO:0030570GO:GO:0045490GO:GO:0046872EnsemblPlantsGene:GSBRNA2T00019898001InterPro:IPR012334PFAM:PF00544
PRINTS:PR00807PANTHER:PTHR31683PANTHER:PTHR31683:SF34InterPro:Pec_lyaseInterPro:Pectin_lyas_foldInterPro:Pectin_lyase_fold/virulence
SMART:SM00656SUPFAM:SSF51126SignalP:SignalP-noTMUniPathway:UPA00545UniParc:UPI0004EEA6C4SEG:seg
Description
BnaCnng30870DPectate lyase [Source:UniProtKB/TrEMBL;Acc:A0A078J2X9]
Coordinates
chrLK033510:+:1911..5964
Molecular Weight (calculated)
46508.9 Da
IEP (calculated)
8.133
GRAVY (calculated)
-0.326
Length
418 amino acids
Sequence
(BLAST)
001: MGITQVLVLF ASALLLSSML FTGVDSTRSN ETWHEHAVDN PDEVAAMVDM STRNSTERRR LGYFSCSTGN PIDDCWRCDR KWKLRRKHLA DCSIGFGRNA
101: IGGRDGRYYV VSDPGDDNPV NPTPGTLRHA VIQDEPLWIV FKRDMVITLR EELIMNSFKT IDGRGANVHI ANGACVTIQY VTNIIIHGVH IHDCKPTGNA
201: MVRSSPSHYG WRTMADGDGI SIFGSSHIWI DHNSLSSCAD GLIDAVMSST AITISNNYFT HHNEVMLLGH SDTYTRDKVM QVTIAYNHFG EGLIQRMPRC
301: RHGYFHVVNN DYTHWEMYAI GGSASPTINS QGNRYLAPSN RFAKEVTKRD YAGEWQWKHW NWRSEGDLFL NGAFFTRSGS GLGASYARAS SLAAKSSSLV
401: GVITSNAGAL NCRAGRRC
Best Arabidopsis Sequence Match ( AT5G48900.1 )
(BLAST)
001: MAVTQILVVF ASALLLSMFF TGVDSTRSNE TWHEHAVENP EEVAAMVDMS IRNSTARRRL GYFSCSTGNP IDDCWRCDRR WQSRRKHLAN CAIGFGRNAI
101: GGRDGRYYVV SDPNDDNPVN PKPGTLRHAV IQEEPLWIVF KRDMVITLKE ELIMNSFKTI DGRGVNVHIA NGACITIQFV TNIIIHGIHI HDCRPTGNAM
201: VRSSPSHYGW RTMADGDGIS IFGSSHIWID HNSLSNCADG LIDAVMASTA ITISNNYFTH HNEVMLLGHS DTYTRDKVMQ VTIAYNHFGE GLIQRMPRCR
301: HGYFHVVNND YTHWEMYAIG GSASPTINSQ GNRYLAPRNR FAKEVTKRDY AGQWQWRHWN WRSEGDLFLN GAFFTRSGSG LGASYARASS LAAKSSSLVG
401: VITYNAGALN CRGGRRC
Arabidopsis Description
Probable pectate lyase 20 [Source:UniProtKB/Swiss-Prot;Acc:Q93WF1]
SUBAcon: [extracellular]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.