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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum, extracellular

Predictor Summary:
  • nucleus 1
  • extracellular 5
  • endoplasmic reticulum 5
  • vacuole 4
  • plasma membrane 4
  • golgi 4
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum, extracellular
Any Predictor:cytosol, nucleus, secretory
BaCelLo:nucleus
iPSORT:secretory
MultiLoc:endoplasmic reticulum
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:cytosol
YLoc:extracellular
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX74293 Canola endoplasmic reticulum, extracellular 99.79 99.79
Bra001011.1-P Field mustard endoplasmic reticulum, extracellular 98.73 98.73
CDY28691 Canola endoplasmic reticulum, extracellular, vacuole 95.54 95.95
AT3G01270.1 Thale cress endoplasmic reticulum, extracellular 90.23 89.47
CDY63769 Canola extracellular 79.41 78.08
CDX85564 Canola extracellular 78.34 78.01
CDX70590 Canola endoplasmic reticulum, extracellular 77.28 76.63
CDX78607 Canola endoplasmic reticulum, extracellular 77.07 76.42
CDY66593 Canola endoplasmic reticulum, extracellular 77.71 73.35
CDX69550 Canola endoplasmic reticulum, extracellular 77.28 72.95
GSMUA_Achr10P... Banana cytosol 43.74 59.54
TraesCS4A01G385700.1 Wheat cytosol 27.6 59.36
VIT_14s0108g00030.t01 Wine grape endoplasmic reticulum, extracellular, vacuole 55.2 59.23
VIT_01s0026g01670.t01 Wine grape endoplasmic reticulum, extracellular, vacuole 55.63 59.14
GSMUA_Achr6P00830_001 Banana endoplasmic reticulum, extracellular 52.65 56.75
KRH18498 Soybean endoplasmic reticulum, extracellular, vacuole 53.29 56.66
GSMUA_Achr10P... Banana extracellular 46.5 56.15
VIT_01s0026g01680.t01 Wine grape endoplasmic reticulum, extracellular 52.44 55.76
GSMUA_Achr2P16830_001 Banana endoplasmic reticulum, extracellular 51.8 55.71
Solyc02g087670.2.1 Tomato extracellular 52.65 55.61
KRG93502 Soybean extracellular 52.23 55.53
PGSC0003DMT400003310 Potato extracellular 52.23 55.16
CDY18330 Canola cytosol 16.99 54.79
Solyc03g058890.2.1 Tomato extracellular 52.23 54.79
PGSC0003DMT400017863 Potato extracellular 51.38 54.75
CDY11033 Canola endoplasmic reticulum, extracellular 47.13 54.68
PGSC0003DMT400014086 Potato extracellular 51.8 54.59
HORVU6Hr1G038630.1 Barley extracellular 46.92 54.57
KRH01130 Soybean extracellular 50.96 54.55
CDX92652 Canola endoplasmic reticulum, extracellular 46.92 54.43
CDY03419 Canola endoplasmic reticulum, extracellular 46.92 54.43
CDY08948 Canola endoplasmic reticulum, extracellular 46.92 54.43
CDY34310 Canola endoplasmic reticulum, vacuole 46.92 54.43
CDY70583 Canola cytosol 28.03 54.32
Os02t0214400-01 Rice plasma membrane 51.38 54.26
Os06t0583900-01 Rice plasma membrane 51.59 54.24
EES06507 Sorghum golgi, vacuole 51.17 54.16
PGSC0003DMT400017862 Potato endoplasmic reticulum, extracellular 45.65 54.16
CDX83690 Canola endoplasmic reticulum, extracellular, vacuole 47.13 53.88
CDY33938 Canola extracellular 47.56 53.72
CDX96854 Canola endoplasmic reticulum, extracellular, plasma membrane 52.23 53.71
CDY68729 Canola endoplasmic reticulum, extracellular, plasma membrane 52.23 53.71
CDY24847 Canola endoplasmic reticulum, extracellular 46.28 53.69
CDY41506 Canola endoplasmic reticulum, extracellular, vacuole 46.92 53.51
CDY05655 Canola extracellular 47.35 53.48
TraesCS6D01G170500.1 Wheat golgi 48.2 53.41
CDY09356 Canola extracellular 51.8 53.39
TraesCS7A01G365700.1 Wheat endoplasmic reticulum, extracellular, vacuole 50.32 53.38
CDY04133 Canola extracellular 52.02 53.38
CDY19932 Canola extracellular 47.35 53.35
CDY56668 Canola extracellular 47.35 53.35
CDY28857 Canola extracellular 46.07 53.32
CDY56520 Canola extracellular 46.07 53.32
CDY41679 Canola endoplasmic reticulum, plasma membrane 51.59 53.17
CDY17432 Canola extracellular 51.8 53.16
CDY00156 Canola extracellular, plastid 46.5 53.16
CDY20049 Canola plastid, vacuole 46.5 53.16
TraesCS7D01G356700.1 Wheat extracellular 50.11 53.15
CDY56220 Canola endoplasmic reticulum, extracellular, vacuole 45.65 52.96
CDY03043 Canola extracellular 51.59 52.94
TraesCS6B01G211900.1 Wheat extracellular, golgi, vacuole 47.77 52.94
HORVU7Hr1G085860.1 Barley endoplasmic reticulum, extracellular, vacuole 49.89 52.93
TraesCS7B01G261700.1 Wheat endoplasmic reticulum, extracellular, vacuole 49.89 52.93
CDY03964 Canola extracellular 46.28 52.91
CDY05305 Canola endoplasmic reticulum, extracellular, vacuole 46.71 52.88
CDY01846 Canola endoplasmic reticulum, extracellular, vacuole 45.44 52.71
CDY12666 Canola extracellular 45.44 52.71
CDY24654 Canola endoplasmic reticulum, extracellular, vacuole 46.5 52.64
EER88571 Sorghum endoplasmic reticulum, plasma membrane 50.74 52.64
CDY32557 Canola extracellular 45.22 52.46
TraesCS7A01G086600.1 Wheat endoplasmic reticulum, extracellular 49.89 52.46
Os06t0144200-01 Rice extracellular, plasma membrane 50.11 52.44
CDY45254 Canola endoplasmic reticulum 50.74 52.18
CDY34149 Canola extracellular 39.7 52.09
CDY45202 Canola extracellular 50.74 52.07
Zm00001d000216_P001 Maize golgi, vacuole 48.41 52.05
OQU75805 Sorghum mitochondrion 48.83 52.04
Zm00001d046389_P007 Maize endoplasmic reticulum, extracellular 47.56 51.73
CDY39314 Canola extracellular 50.32 51.63
CDY01119 Canola endoplasmic reticulum, extracellular 47.35 51.26
CDY47327 Canola endoplasmic reticulum, extracellular 46.92 51.04
PGSC0003DMT400014085 Potato extracellular, golgi 42.89 50.75
CDY48132 Canola endoplasmic reticulum, golgi 46.07 50.7
Zm00001d036158_P001 Maize endoplasmic reticulum, extracellular, vacuole 48.62 50.55
EER87830 Sorghum endoplasmic reticulum, extracellular, vacuole 49.89 50.54
Solyc03g058910.2.1 Tomato extracellular, golgi 42.68 50.5
CDY16732 Canola endoplasmic reticulum, golgi 45.86 50.47
CDX89799 Canola extracellular 46.07 50.35
CDY61137 Canola extracellular 46.07 50.35
CDY46471 Canola endoplasmic reticulum, extracellular 46.5 49.89
CDX86615 Canola endoplasmic reticulum, extracellular, golgi 45.65 49.88
CDY15517 Canola endoplasmic reticulum, extracellular, golgi 45.65 49.88
CDX81636 Canola endoplasmic reticulum 51.17 49.79
TraesCS6A01G184500.2 Wheat extracellular, golgi, vacuole 48.83 49.68
CDX82902 Canola endoplasmic reticulum, extracellular, vacuole 34.39 49.54
CDY53552 Canola extracellular 51.8 49.29
Zm00001d036945_P001 Maize endoplasmic reticulum 43.95 49.29
CDY65626 Canola golgi 47.13 48.9
Os06t0144900-01 Rice mitochondrion 49.04 48.84
CDX98092 Canola extracellular 36.73 48.6
CDY30040 Canola extracellular 36.73 48.6
CDX98091 Canola extracellular 38.0 48.25
CDY01151 Canola endoplasmic reticulum, extracellular, vacuole 46.28 48.23
CDY53564 Canola endoplasmic reticulum, extracellular, vacuole 46.5 48.13
CDY30041 Canola extracellular 37.58 47.71
CDX79122 Canola extracellular 39.92 46.88
CDY18738 Canola endoplasmic reticulum, extracellular 47.35 46.85
CDY66697 Canola endoplasmic reticulum, golgi 44.37 46.76
CDX77470 Canola golgi, plasma membrane 44.8 45.97
HORVU7Hr1G019500.1 Barley mitochondrion 50.32 45.58
CDX76388 Canola extracellular 38.85 44.85
CDY20748 Canola extracellular 36.94 44.85
CDY06557 Canola extracellular 36.73 44.7
CDY27438 Canola extracellular 38.43 44.36
CDX77400 Canola endoplasmic reticulum, extracellular 46.28 44.31
CDX70244 Canola vacuole 40.13 42.86
CDX73573 Canola extracellular 42.89 42.44
CDX78152 Canola extracellular 42.89 42.44
CDX67560 Canola plasma membrane 43.31 41.63
CDY56964 Canola endoplasmic reticulum, extracellular, vacuole 42.46 40.65
CDX67615 Canola endoplasmic reticulum, extracellular, vacuole 42.04 40.33
CDY07515 Canola endoplasmic reticulum, extracellular, vacuole 42.04 40.24
CDX73426 Canola endoplasmic reticulum, extracellular, vacuole 42.25 38.49
GSMUA_Achr7P08840_001 Banana nucleus 53.72 37.76
CDY11284 Canola extracellular, golgi 40.55 37.45
CDY13312 Canola plasma membrane 42.46 37.31
Solyc02g067450.2.1 Tomato extracellular 48.2 36.85
CDY41382 Canola endoplasmic reticulum, golgi 41.19 36.81
CDY58428 Canola endoplasmic reticulum, golgi, plastid 40.13 36.7
CDY70492 Canola endoplasmic reticulum, extracellular 1.06 9.09
CDX81635 Canola mitochondrion, nucleus 0.42 1.32
CDX96858 Canola mitochondrion, nucleus 0.42 1.32
CDY04136 Canola mitochondrion, nucleus 0.42 1.32
CDY09355 Canola mitochondrion, nucleus 0.42 1.32
CDY41678 Canola mitochondrion, nucleus 0.42 1.32
CDY45199 Canola mitochondrion, nucleus 0.42 1.32
CDY45253 Canola mitochondrion, nucleus 0.42 1.32
CDY53553 Canola mitochondrion, nucleus 0.42 1.32
CDY66531 Canola mitochondrion, nucleus 0.42 1.32
Protein Annotations
KEGG:00040+4.2.2.2Gene3D:2.160.20.10MapMan:21.3.5.2GO:A0A078DXF6InterPro:AmbAllergenEnsemblPlants:CDX91953
ProteinID:CDX91953ProteinID:CDX91953.1GO:GO:0003674GO:GO:0003824GO:GO:0005975GO:GO:0008150
GO:GO:0008152GO:GO:0009056GO:GO:0009987GO:GO:0030570GO:GO:0045490EnsemblPlantsGene:GSBRNA2T00153589001
InterPro:IPR012334PFAM:PF00544PFAM:PF04431PRINTS:PR00807PANTHER:PTHR31683PANTHER:PTHR31683:SF7
InterPro:Pec_lyaseInterPro:Pec_lyase_NInterPro:Pectin_lyas_foldInterPro:Pectin_lyase_fold/virulenceSMART:SM00656SUPFAM:SSF51126
SignalP:SignalP-noTMUniPathway:UPA00545UniParc:UPI0004EF1648SEG:seg::
Description
BnaC03g32550D
Coordinates
chrLK031870:+:972606..975008
Molecular Weight (calculated)
53645.9 Da
IEP (calculated)
9.745
GRAVY (calculated)
-0.616
Length
471 amino acids
Sequence
(BLAST)
001: METARLFKLV CVICIASLIP TLRANVAETD DYWVKMANEA RKRTLMAYHP DPYQIVDHFH ERHYDNSTDV EETEEHASEE EDDIEMSSSP TNSTRRSLRG
101: RGKGKGRGKW SKLKGPCTAS NPIDKCWRCQ PDWARRRKKL VKCVRGFGYR TTGGKRGRIY VVTSNRDDDT VNPRPGTLRH AVIQNEPLWI IFKHDMSIRL
201: SQELMINSHK TIDARGTNVH IAYGAGITMQ YVRNIIIHGL HVHHIVPGSG GMIRNSNDHF GFRGQADGDG ISIFGATNIW LDHISMSKCQ DGLIDAIMGS
301: TGITISNSHF THHNDVMLLG AQNDNHADKK MQVTVAFNHF GKGLVQRMPR IRWGFVHVVN NDYTHWELYA IGGSQSPTIL SHGNRFIAPP HIQHYREVTK
401: RDYAPESEWK NWNWRSDKDI FMNNAYFRQS GNPKFMCSHS RQQMIKPKHG SAVSKLTKYA GALDCRVGKP C
Best Arabidopsis Sequence Match ( AT3G01270.1 )
(BLAST)
001: METARLFKLV CVICIASLIP TIRANVADET DEYWVNKANE ARKHTLMAYH PDPYEIVDHF HERHYDNSTD VEGTEEEKAV ASEEEDVIEM ISSPTNSTRR
101: SLTGRGKGKG KGKWSKLTGP CTASNPIDKC WRCQPDWARR RKKLVHCVRG FGYRTTGGKR GRIYVVTSPR DDDMVNPRPG TLRHAVIQKE PLWIVFKHDM
201: SIRLSQELMI TSDKTIDARG ANVHIAYGAG ITMQYVHNII IHGLHVHHIV KSSGGLIRDS INHFGHRGEA DGDGISIFGA TNIWLDHISM SKCQDGLIDA
301: IMGSTAITIS NSHFTHHNDV MLLGAQNNNM DDKKMQVTVA YNHFGKGLVQ RMPRVRWGFV HVVNNDYTHW ELYAIGGSQG PTILSHGNRF IAPPHKQHYR
401: EVTKRDYASE SEWKNWNWRS EKDVFMNNAY FRQSGNPHFK CSHSRQQMIK PKNGMAVSKL TKYAGALDCR VGKAC
Arabidopsis Description
Pectate lyase [Source:UniProtKB/TrEMBL;Acc:Q08A70]
SUBAcon: [endoplasmic reticulum,extracellular]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.