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Potato
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Potato
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular

Predictor Summary:
  • extracellular 9
  • endoplasmic reticulum 5
  • vacuole 6
  • plasma membrane 5
  • golgi 5
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:extracellular
Any Predictor:plastid, secretory
BaCelLo:secretory
EpiLoc:extracellular
iPSORT:secretory
MultiLoc:extracellular
Plant-mPloc:extracellular, plastid
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:vacuole
YLoc:extracellular
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Solyc02g087670.2.1 Tomato extracellular 97.09 97.09
PGSC0003DMT400014086 Potato extracellular 73.77 73.6
PGSC0003DMT400017863 Potato extracellular 70.63 71.27
GSMUA_Achr6P00830_001 Banana endoplasmic reticulum, extracellular 61.66 62.93
VIT_14s0108g00030.t01 Wine grape endoplasmic reticulum, extracellular, vacuole 61.21 62.19
VIT_01s0026g01670.t01 Wine grape endoplasmic reticulum, extracellular, vacuole 61.44 61.85
GSMUA_Achr2P16830_001 Banana endoplasmic reticulum, extracellular 60.54 61.64
TraesCS4A01G385700.1 Wheat cytosol 30.27 61.64
PGSC0003DMT400083135 Potato extracellular 59.87 61.38
PGSC0003DMT400046723 Potato endoplasmic reticulum, golgi, vacuole 59.64 61.15
GSMUA_Achr10P... Banana extracellular 53.14 60.77
GSMUA_Achr10P... Banana cytosol 45.74 58.96
VIT_01s0026g01680.t01 Wine grape endoplasmic reticulum, extracellular 58.3 58.69
Os02t0214400-01 Rice plasma membrane 56.95 56.95
PGSC0003DMT400002241 Potato extracellular 56.05 56.95
HORVU6Hr1G038630.1 Barley extracellular 51.57 56.79
KRH01130 Soybean extracellular 55.38 56.14
KRH45851 Soybean extracellular 56.73 56.1
TraesCS7A01G365700.1 Wheat endoplasmic reticulum, extracellular, vacuole 55.83 56.08
TraesCS7D01G356700.1 Wheat extracellular 55.61 55.86
PGSC0003DMT400014085 Potato extracellular, golgi 49.78 55.78
HORVU7Hr1G085860.1 Barley endoplasmic reticulum, extracellular, vacuole 55.38 55.63
KRH74782 Soybean extracellular 55.83 55.58
KRH69345 Soybean extracellular 55.61 55.48
Zm00001d046389_P007 Maize endoplasmic reticulum, extracellular 53.81 55.43
TraesCS7B01G261700.1 Wheat endoplasmic reticulum, extracellular, vacuole 55.16 55.41
OQU75805 Sorghum mitochondrion 54.71 55.2
PGSC0003DMT400027955 Potato extracellular 49.55 55.11
Os06t0583900-01 Rice plasma membrane 55.16 54.91
AT1G14420.1 Thale cress endoplasmic reticulum 56.5 54.9
KRH18498 Soybean endoplasmic reticulum, extracellular, vacuole 54.48 54.85
PGSC0003DMT400039385 Potato extracellular 49.33 54.59
PGSC0003DMT400017862 Potato endoplasmic reticulum, extracellular 48.43 54.41
Zm00001d000216_P001 Maize golgi, vacuole 53.36 54.34
EES06507 Sorghum golgi, vacuole 54.04 54.16
KRG93502 Soybean extracellular 53.59 53.95
PGSC0003DMT400069632 Potato vacuole 48.88 53.83
Bra026832.1-P Field mustard extracellular 54.48 53.76
CDY04133 Canola extracellular 55.16 53.59
Bra017412.1-P Field mustard extracellular 54.93 53.38
Bra024811.1-P Field mustard extracellular 54.93 53.38
CDY45202 Canola extracellular 54.93 53.38
CDY03043 Canola extracellular 54.93 53.38
PGSC0003DMT400032910 Potato endoplasmic reticulum, extracellular, vacuole 48.21 53.35
Os06t0144200-01 Rice extracellular, plasma membrane 53.81 53.33
EER88571 Sorghum endoplasmic reticulum, plasma membrane 54.26 53.3
CDY68729 Canola endoplasmic reticulum, extracellular, plasma membrane 54.71 53.28
Bra026583.1-P Field mustard endoplasmic reticulum, plasma membrane 54.48 53.17
TraesCS7A01G086600.1 Wheat endoplasmic reticulum, extracellular 53.36 53.12
CDX96854 Canola endoplasmic reticulum, extracellular, plasma membrane 54.48 53.06
Bra006279.1-P Field mustard endoplasmic reticulum, extracellular 56.28 52.84
CDX78607 Canola endoplasmic reticulum, extracellular 56.28 52.84
Bra016700.1-P Field mustard endoplasmic reticulum, extracellular, plasma membrane 54.26 52.84
CDY17432 Canola extracellular 54.26 52.72
CDX70590 Canola endoplasmic reticulum, extracellular 56.05 52.63
AT5G15110.1 Thale cress endoplasmic reticulum, extracellular 55.61 52.54
CDY28691 Canola endoplasmic reticulum, extracellular, vacuole 55.16 52.45
Zm00001d036158_P001 Maize endoplasmic reticulum, extracellular, vacuole 53.14 52.32
CDX74293 Canola endoplasmic reticulum, extracellular 55.16 52.23
CDX91953 Canola endoplasmic reticulum, extracellular 55.16 52.23
CDX85564 Canola extracellular 55.38 52.22
TraesCS6B01G211900.1 Wheat extracellular, golgi, vacuole 49.55 52.0
TraesCS6D01G170500.1 Wheat golgi 49.55 52.0
EER87830 Sorghum endoplasmic reticulum, extracellular, vacuole 54.04 51.83
AT3G01270.1 Thale cress endoplasmic reticulum, extracellular 55.16 51.79
CDX69550 Canola endoplasmic reticulum, extracellular 57.85 51.7
Bra008721.1-P Field mustard endoplasmic reticulum, extracellular 57.85 51.7
CDY66593 Canola endoplasmic reticulum, extracellular 57.85 51.7
PGSC0003DMT400045436 Potato extracellular 53.14 51.63
Bra001011.1-P Field mustard endoplasmic reticulum, extracellular 54.48 51.59
Bra023504.1-P Field mustard extracellular 55.61 51.56
AT2G02720.1 Thale cress extracellular, vacuole 52.47 51.43
CDY63769 Canola extracellular 55.16 51.36
Bra026221.1-P Field mustard endoplasmic reticulum 52.69 51.31
CDY39314 Canola extracellular 52.69 51.2
Os06t0144900-01 Rice mitochondrion 54.04 50.95
PGSC0003DMT400040893 Potato endoplasmic reticulum, vacuole 49.33 50.11
CDX81636 Canola endoplasmic reticulum 53.81 49.59
Zm00001d036945_P001 Maize endoplasmic reticulum 46.64 49.52
PGSC0003DMT400042396 Potato endoplasmic reticulum, extracellular, vacuole 43.5 48.87
TraesCS6A01G184500.2 Wheat extracellular, golgi, vacuole 50.67 48.81
CDY53552 Canola extracellular 54.04 48.69
PGSC0003DMT400076251 Potato extracellular 48.88 48.66
PGSC0003DMT400051938 Potato endoplasmic reticulum, extracellular 48.65 47.17
PGSC0003DMT400042395 Potato extracellular 39.91 46.72
PGSC0003DMT400009869 Potato cytosol 44.39 46.48
HORVU7Hr1G019500.1 Barley mitochondrion 53.81 46.15
PGSC0003DMT400011046 Potato mitochondrion 29.37 45.02
PGSC0003DMT400079776 Potato plasma membrane 45.07 41.02
GSMUA_Achr7P08840_001 Banana nucleus 59.42 39.55
PGSC0003DMT400060374 Potato extracellular, plasma membrane, vacuole 44.62 34.85
CDY04136 Canola mitochondrion, nucleus 0.45 1.32
Protein Annotations
KEGG:00040+4.2.2.2EntrezGene:102594149Gene3D:2.160.20.10MapMan:21.3.5.2InterPro:AmbAllergenGO:GO:0003674
GO:GO:0003824GO:GO:0005488GO:GO:0005975GO:GO:0008150GO:GO:0008152GO:GO:0009056
GO:GO:0009987GO:GO:0016829GO:GO:0030570GO:GO:0045490GO:GO:0046872InterPro:IPR012334
UniProt:M0ZLE8PFAM:PF00544PFAM:PF04431EnsemblPlantsGene:PGSC0003DMG400001311PGSC:PGSC0003DMG400001311EnsemblPlants:PGSC0003DMT400003310
PRINTS:PR00807PANTHER:PTHR31683PANTHER:PTHR31683:SF7InterPro:Pec_lyaseInterPro:Pec_lyase_NInterPro:Pectin_lyas_fold
InterPro:Pectin_lyase_fold/virulenceSMART:SM00656SUPFAM:SSF51126SignalP:SignalP-noTMTMHMM:TMhelixUniParc:UPI0002952570
RefSeq:XP_006338480.1SEG:seg::::
Description
Pectate lyase P59 [Source:PGSC_GENE;Acc:PGSC0003DMG400001311]
Coordinates
chr2:-:46443332..46446483
Molecular Weight (calculated)
49908.4 Da
IEP (calculated)
8.221
GRAVY (calculated)
-0.345
Length
446 amino acids
Sequence
(BLAST)
001: MRGTKLVYLS LLLFSTFLAI NGHIGEFDEV WRRRAQEADE WAIKAYKPDP INVTLAFAKQ TGQALKEIKE AKLAINGTRR ELKGGGKKYN GPCLVTNPID
101: RCWRCQPNWA DNRKRLADCA MGFAKGTTGG KAGEIYVVTD SSDDTSDPKP GTLRYGVIQK EPLWIIFAKS MTIRLHQELI VQSDKTIDGR GVNVHIANGA
201: GFMLQYVKNV IIHGLRIHDI VVGSGGMIRD AMDHIGQRTQ SDGDGISIFG SSNIWVDHVS MWSCYDGLVD AVEGSTAVTI SNSHFTDHNE VMLFGASDSS
301: SIDQRMQITV AYNHFGKRLI QRMPRCRWGF IHVVNNDYTH WNMYAIGGSQ HPTIISQGNR FIAPPDMFKK EVTKRDYSPE SVWKQWSWRS QGDLFMNGAF
401: FVESGDPDWT KKHTELFDGI VSASGDQVTW ITRFSGALNC KPGEAC
Best Arabidopsis Sequence Match ( AT5G15110.1 )
(BLAST)
001: MEMVRLSKLM FTFCIAVLIP TIRGNISELD EYWSQRADEA REFTLQAYHS DPYEIVDHFH ERHYDNSTDV TTPEEDGDAK PEEEEKEFIE MLGSSTNSTR
101: RSLRGKGKGK WSKLKGPCTA SNPIDKCWRC RSDWAKRRKK LTRCVRGFGH RTTGGKRGRI YVVTSNLDED MVNPKPGTLR HAVIQKEPLW IIFKNDMSIR
201: LNQELLINSH KTIDARGANV HVAHGAGITM QFVKNVVIHG LHIHHISESS GGMIRDSVDH FGMRTRADGD GLSIYGSSNI WLDHISMSKC QDGLIDAIVG
301: STGITISNSH FTHHNDVMLL GAQNTNEADK HMQVTVAYNH FGKGLVQRMP RIRWGFVHVV NNDYTHWELY AIGGSQGPTI LSHGNRFIAP PHKPHYREVT
401: KRDYASEDEW KHWNWRSDKD VFMNGAYFRQ SGNPQYKCAH TRQQMIKPKN GLAVSKLTKY AGALDCRVGR RC
Arabidopsis Description
Pectate lyase family protein [Source:TAIR;Acc:AT5G15110]
SUBAcon: [endoplasmic reticulum,extracellular]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.