Factsheet for TraesCS7A01G365700.1

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, extracellular, vacuole

Predictor Summary:

extracellular 5
endoplasmic reticulum 5
vacuole 5
plasma membrane 4
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, extracellular, vacuole
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7D01G356700.1	Wheat	extracellular	98.65	98.65
TraesCS7B01G261700.1	Wheat	endoplasmic reticulum, extracellular, vacuole	97.75	97.75
HORVU7Hr1G085860.1	Barley	endoplasmic reticulum, extracellular, vacuole	92.34	92.34
Os06t0583900-01	Rice	plasma membrane	75.9	75.22
Zm00001d046389_P007	Maize	endoplasmic reticulum, extracellular	69.14	70.9
EER88571	Sorghum	endoplasmic reticulum, plasma membrane	72.3	70.7
Zm00001d036945_P001	Maize	endoplasmic reticulum	61.94	65.48
TraesCS4A01G385700.1	Wheat	cytosol	30.41	61.64
GSMUA_Achr6P00830_001	Banana	endoplasmic reticulum, extracellular	58.33	59.27
VIT_14s0108g00030.t01	Wine grape	endoplasmic reticulum, extracellular, vacuole	58.56	59.23
VIT_17s0000g05740.t01	Wine grape	extracellular	57.21	59.21
KRH63402	Soybean	extracellular	57.88	59.08
VIT_01s0026g01670.t01	Wine grape	endoplasmic reticulum, extracellular, vacuole	58.33	58.47
GSMUA_Achr10P...	Banana	extracellular	51.35	58.46
GSMUA_Achr10P...	Banana	cytosol	45.27	58.09
TraesCS6A01G184500.2	Wheat	extracellular, golgi, vacuole	60.36	57.88
PGSC0003DMT400083135	Potato	extracellular	56.53	57.7
GSMUA_Achr2P16830_001	Banana	endoplasmic reticulum, extracellular	56.76	57.53
KRH54508	Soybean	extracellular	43.02	57.36
Solyc03g113150.2.1	Tomato	endoplasmic reticulum, golgi, vacuole	56.08	57.24
Solyc06g071020.2.1	Tomato	extracellular	56.08	57.24
KRH01130	Soybean	extracellular	56.53	57.05
PGSC0003DMT400046723	Potato	endoplasmic reticulum, golgi, vacuole	55.63	56.78
PGSC0003DMT400002241	Potato	extracellular	55.86	56.49
Solyc01g010740.2.1	Tomato	endoplasmic reticulum, extracellular	55.86	56.49
Solyc02g087670.2.1	Tomato	extracellular	56.31	56.05
PGSC0003DMT400003310	Potato	extracellular	56.08	55.83
VIT_01s0026g01680.t01	Wine grape	endoplasmic reticulum, extracellular	55.41	55.53
KRG93502	Soybean	extracellular	54.95	55.08
TraesCS7A01G086600.1	Wheat	endoplasmic reticulum, extracellular	55.41	54.91
KRH18498	Soybean	endoplasmic reticulum, extracellular, vacuole	54.73	54.85
PGSC0003DMT400017863	Potato	extracellular	53.38	53.62
PGSC0003DMT400014086	Potato	extracellular	53.83	53.47
KRH45851	Soybean	extracellular	54.28	53.44
KRH74782	Soybean	extracellular	53.6	53.12
Solyc03g058890.2.1	Tomato	extracellular	53.6	53.01
PGSC0003DMT400017862	Potato	endoplasmic reticulum, extracellular	47.3	52.9
Bra026832.1-P	Field mustard	extracellular	52.48	51.55
Bra016700.1-P	Field mustard	endoplasmic reticulum, extracellular, plasma membrane	52.7	51.09
CDX96854	Canola	endoplasmic reticulum, extracellular, plasma membrane	52.7	51.09
KRH69345	Soybean	extracellular	51.35	51.01
AT1G14420.1	Thale cress	endoplasmic reticulum	52.7	50.98
CDY68729	Canola	endoplasmic reticulum, extracellular, plasma membrane	52.25	50.66
Bra026221.1-P	Field mustard	endoplasmic reticulum	52.25	50.66
CDY17432	Canola	extracellular	52.25	50.54
TraesCS6A01G139800.1	Wheat	endoplasmic reticulum, extracellular, vacuole	43.02	50.53
CDY28691	Canola	endoplasmic reticulum, extracellular, vacuole	53.15	50.32
CDX74293	Canola	endoplasmic reticulum, extracellular	53.38	50.32
CDX91953	Canola	endoplasmic reticulum, extracellular	53.38	50.32
CDY04133	Canola	extracellular	51.8	50.11
Bra017412.1-P	Field mustard	extracellular	51.8	50.11
Bra001011.1-P	Field mustard	endoplasmic reticulum, extracellular	52.93	49.89
CDY39314	Canola	extracellular	51.58	49.89
Solyc05g007080.2.1	Tomato	extracellular	51.13	49.78
Solyc03g058910.2.1	Tomato	extracellular, golgi	44.59	49.75
PGSC0003DMT400045436	Potato	extracellular	51.13	49.46
PGSC0003DMT400014085	Potato	extracellular, golgi	44.14	49.25
Bra026583.1-P	Field mustard	endoplasmic reticulum, plasma membrane	50.45	49.02
AT3G01270.1	Thale cress	endoplasmic reticulum, extracellular	52.25	48.84
AT5G15110.1	Thale cress	endoplasmic reticulum, extracellular	51.58	48.52
AT2G02720.1	Thale cress	extracellular, vacuole	49.32	48.13
CDY03043	Canola	extracellular	49.32	47.71
CDX85564	Canola	extracellular	50.68	47.57
CDX81636	Canola	endoplasmic reticulum	51.8	47.52
CDY63769	Canola	extracellular	50.9	47.18
CDY45202	Canola	extracellular	48.65	47.06
Bra024811.1-P	Field mustard	extracellular	48.65	47.06
CDX70590	Canola	endoplasmic reticulum, extracellular	50.23	46.95
CDX78607	Canola	endoplasmic reticulum, extracellular	50.23	46.95
Bra006279.1-P	Field mustard	endoplasmic reticulum, extracellular	50.23	46.95
Bra023504.1-P	Field mustard	extracellular	50.68	46.78
CDY53552	Canola	extracellular	52.03	46.67
CDY66593	Canola	endoplasmic reticulum, extracellular	52.03	46.29
Bra008721.1-P	Field mustard	endoplasmic reticulum, extracellular	51.8	46.09
CDX69550	Canola	endoplasmic reticulum, extracellular	51.8	46.09
TraesCS2A01G016500.1	Wheat	golgi	49.1	45.32
TraesCS1A01G143600.1	Wheat	extracellular	45.95	42.5
GSMUA_Achr7P08840_001	Banana	nucleus	57.88	38.36
Solyc02g067450.2.1	Tomato	extracellular	49.32	35.55
CDY04136	Canola	mitochondrion, nucleus	0.45	1.32

Protein Annotations

EnsemblPlants:TraesCS7A01G365700.1	EnsemblPlantsGene:TraesCS7A01G365700	Gene3D:2.160.20.10	GO:GO:0003674	GO:GO:0003824	GO:GO:0030570
InterPro:AmbAllergen	InterPro:IPR012334	InterPro:Pec_lyase	InterPro:Pec_lyase_N	InterPro:Pectin_lyas_fold	InterPro:Pectin_lyase_fold/virulence
KEGG:00040+4.2.2.2	PANTHER:PTHR31683	PANTHER:PTHR31683:SF27	PFAM:PF00544	PFAM:PF04431	PRINTS:PR00807
SEG:seg	SignalP:SignalP-noTM	SMART:SM00656	SUPFAM:SSF51126	MapMan:21.3.5.2	:

Description

No Description!

Coordinates

chr7A:+:539651800..539653229

Molecular Weight (calculated)

49734.2 Da

IEP (calculated)

8.123

GRAVY (calculated)

-0.357

Length

444 amino acids

Sequence
(BLAST)

001: MEGFQWSRPV SLLLYAVFFL AAAAVSETNI GEFDEYWQRR QLEARARAEA AYHPNPIEVA NSLNRAVHRA VREESGSRRK LLGLHKKFAG PCTATNPIDR
101: CWRCRDDWAT DRMRLARCAQ GFGRHATGGL GGKIYIVTDG DDDDVLEPRP GTLRWAVIQN EPLWIIFARP MLIKLKEELL VGSNKTIDGR GVQLRIADGA
201: QVTVQYAHNV IIHNIHVNDL IVGKGGRIRD SPQHAGFRTQ SDGDGVSVFG STDVWLDHLS LATCQDGLID VIDQSTGVTI SNCHLTNHND VMLFGSSDSN
301: PKDEIMQITV AFNHFGRGLV QRMPRCRWGF FHVVNNDYTH WLMYAIGGSK NPTIISQGNR YIAPPNLAAK LITKRLYAEE SEWKNWVWHS EGDLMLNDAV
401: FTDSGGPNQR KFEKDDLIPP KPGSYVTRLT RFAGCLPCKP GKPC

Best Arabidopsis Sequence Match ( AT1G14420.1 )
(BLAST)

001: MAAAFLNLGG YVFVFFSSFL AIVAPQVRGN VAVFDSYWTQ RQSDALKQTI GSYDPHPLNV TNHFNYHVNI AVDASESRND TRRELTQVRS GRKTHKSSGK
101: CLAYNPIDNC WRCDRNWANN RKKLADCVLG FGRRTTGGKD GPIYVVKDAS DNDLINPKPG TLRHAVTRDG PLWIIFARSM IIKLQQELMI TSDKTIDGRG
201: ARVYIMEGAG LTLQFVNNVI IHNIYVKHIV PGNGGLIRDS EAHIGLRTKS DGDGISLFGA TNIWIDHVSM TRCADGMIDA IDGSTAVTIS NSHFTDHQEV
301: MLFGARDEHV IDKKMQITVA FNHFGKRLEQ RMPRCRYGTI HVVNNDYTHW EMYAIGGNMN PTIISQGNRF IAPPNEEAKQ ITKREYTPYG EWKSWNWQSE
401: GDYFLNGAYF VQSGKANAWS SKPKTPLPNK FTIRPKPGTM VRKLTMDAGV LGCKLGEAC

Arabidopsis Description

AT59Probable pectate lyase 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9M9S2]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.