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Maize
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Maize
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum, extracellular

Predictor Summary:
  • extracellular 5
  • endoplasmic reticulum 5
  • vacuole 4
  • plasma membrane 4
  • golgi 4
  • peroxisome 1
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum, extracellular
Any Predictor:secretory
iPSORT:secretory
MultiLoc:endoplasmic reticulum
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:peroxisome
YLoc:extracellular
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d036945_P001 Maize endoplasmic reticulum 81.99 84.52
EER88571 Sorghum endoplasmic reticulum, plasma membrane 88.22 84.14
Os06t0583900-01 Rice plasma membrane 78.29 75.67
HORVU7Hr1G085860.1 Barley endoplasmic reticulum, extracellular, vacuole 71.59 69.82
TraesCS7A01G365700.1 Wheat endoplasmic reticulum, extracellular, vacuole 70.9 69.14
TraesCS7B01G261700.1 Wheat endoplasmic reticulum, extracellular, vacuole 70.9 69.14
TraesCS7D01G356700.1 Wheat extracellular 70.44 68.69
GSMUA_Achr6P00830_001 Banana endoplasmic reticulum, extracellular 57.97 57.44
VIT_17s0000g05740.t01 Wine grape extracellular 56.81 57.34
GSMUA_Achr10P... Banana extracellular 51.04 56.67
GSMUA_Achr10P... Banana cytosol 45.27 56.65
PGSC0003DMT400083135 Potato extracellular 56.81 56.55
GSMUA_Achr2P16830_001 Banana endoplasmic reticulum, extracellular 57.04 56.39
VIT_14s0108g00030.t01 Wine grape endoplasmic reticulum, extracellular, vacuole 57.04 56.26
VIT_01s0026g01670.t01 Wine grape endoplasmic reticulum, extracellular, vacuole 57.27 55.98
KRH01130 Soybean extracellular 56.81 55.91
Solyc06g071020.2.1 Tomato extracellular 56.12 55.86
KRH18498 Soybean endoplasmic reticulum, extracellular, vacuole 56.35 55.08
KRH54508 Soybean extracellular 42.03 54.65
Zm00001d000216_P001 Maize golgi, vacuole 54.73 54.11
Solyc02g087670.2.1 Tomato extracellular 55.66 54.04
KRH63402 Soybean extracellular 54.27 54.02
KRG93502 Soybean extracellular 55.2 53.95
PGSC0003DMT400003310 Potato extracellular 55.43 53.81
PGSC0003DMT400002241 Potato extracellular 54.5 53.76
Solyc01g010740.2.1 Tomato endoplasmic reticulum, extracellular 54.27 53.53
PGSC0003DMT400017863 Potato extracellular 54.5 53.39
Solyc03g113150.2.1 Tomato endoplasmic reticulum, golgi, vacuole 53.58 53.33
PGSC0003DMT400046723 Potato endoplasmic reticulum, golgi, vacuole 53.58 53.33
PGSC0003DMT400014086 Potato extracellular 54.97 53.24
KRH74782 Soybean extracellular 54.73 52.9
VIT_01s0026g01680.t01 Wine grape endoplasmic reticulum, extracellular 53.81 52.6
KRH45851 Soybean extracellular 54.5 52.33
Solyc03g058890.2.1 Tomato extracellular 54.04 52.12
CDY68729 Canola endoplasmic reticulum, extracellular, plasma membrane 54.97 51.97
CDX96854 Canola endoplasmic reticulum, extracellular, plasma membrane 54.97 51.97
Bra016700.1-P Field mustard endoplasmic reticulum, extracellular, plasma membrane 54.97 51.97
CDY04133 Canola extracellular 54.5 51.42
Bra017412.1-P Field mustard extracellular 54.5 51.42
Zm00001d036158_P001 Maize endoplasmic reticulum, extracellular, vacuole 53.58 51.21
KRH69345 Soybean extracellular 52.66 51.01
CDY17432 Canola extracellular 54.04 50.98
PGSC0003DMT400017862 Potato endoplasmic reticulum, extracellular 46.19 50.38
AT1G14420.1 Thale cress endoplasmic reticulum 53.35 50.33
Bra026832.1-P Field mustard extracellular 52.42 50.22
Bra026221.1-P Field mustard endoplasmic reticulum 53.12 50.22
CDY39314 Canola extracellular 52.42 49.46
Solyc03g058910.2.1 Tomato extracellular, golgi 45.27 49.25
CDY03043 Canola extracellular 52.19 49.24
CDY45202 Canola extracellular 51.96 49.02
Bra024811.1-P Field mustard extracellular 51.96 49.02
Bra026583.1-P Field mustard endoplasmic reticulum, plasma membrane 51.73 49.02
PGSC0003DMT400014085 Potato extracellular, golgi 45.03 48.99
Solyc05g007080.2.1 Tomato extracellular 51.5 48.9
AT2G02720.1 Thale cress extracellular, vacuole 51.27 48.79
PGSC0003DMT400045436 Potato extracellular 51.5 48.58
CDY28691 Canola endoplasmic reticulum, extracellular, vacuole 52.42 48.4
AT5G15110.1 Thale cress endoplasmic reticulum, extracellular 51.96 47.67
Zm00001d025067_P001 Maize mitochondrion 49.88 47.58
CDX74293 Canola endoplasmic reticulum, extracellular 51.73 47.56
CDX91953 Canola endoplasmic reticulum, extracellular 51.73 47.56
AT3G01270.1 Thale cress endoplasmic reticulum, extracellular 51.96 47.37
Zm00001d004448_P001 Maize endoplasmic reticulum 48.96 47.32
Bra001011.1-P Field mustard endoplasmic reticulum, extracellular 51.27 47.13
CDX70590 Canola endoplasmic reticulum, extracellular 51.5 46.95
CDX85564 Canola extracellular 51.27 46.93
CDX78607 Canola endoplasmic reticulum, extracellular 51.04 46.53
Bra006279.1-P Field mustard endoplasmic reticulum, extracellular 51.04 46.53
CDY63769 Canola extracellular 51.27 46.35
Bra023504.1-P Field mustard extracellular 51.27 46.15
CDX81636 Canola endoplasmic reticulum 51.5 46.07
CDY66593 Canola endoplasmic reticulum, extracellular 52.89 45.89
CDX69550 Canola endoplasmic reticulum, extracellular 52.66 45.69
Bra008721.1-P Field mustard endoplasmic reticulum, extracellular 52.66 45.69
CDY53552 Canola extracellular 52.19 45.66
Zm00001d032806_P001 Maize cytosol, plastid 41.34 41.44
GSMUA_Achr7P08840_001 Banana nucleus 56.81 36.72
Solyc02g067450.2.1 Tomato extracellular 48.27 33.93
CDY04136 Canola mitochondrion, nucleus 0.46 1.32
Protein Annotations
KEGG:00040+4.2.2.2Gene3D:2.160.20.10MapMan:21.3.5.2UniProt:A0A1D6P2H6ProteinID:AQL04209.1InterPro:AmbAllergen
GO:GO:0003674GO:GO:0003824GO:GO:0005488GO:GO:0005975GO:GO:0008150GO:GO:0008152
GO:GO:0009056GO:GO:0009987GO:GO:0016829GO:GO:0030570GO:GO:0045490GO:GO:0046872
InterPro:IPR012334PFAM:PF00544PFAM:PF04431PRINTS:PR00807PANTHER:PTHR31683PANTHER:PTHR31683:SF27
InterPro:Pec_lyaseInterPro:Pec_lyase_NInterPro:Pectin_lyas_foldInterPro:Pectin_lyase_fold/virulenceSMART:SM00656SUPFAM:SSF51126
SignalP:SignalP-noTMTMHMM:TMhelixUniParc:UPI0008423549EnsemblPlantsGene:Zm00001d046389EnsemblPlants:Zm00001d046389_P007EnsemblPlants:Zm00001d046389_T007
SEG:seg:::::
Description
Probable pectate lyase 3
Coordinates
chr9:+:86783975..86785440
Molecular Weight (calculated)
48798.1 Da
IEP (calculated)
8.912
GRAVY (calculated)
-0.353
Length
433 amino acids
Sequence
(BLAST)
001: MVDGFRWIRP GSFVLYLVFF FLSAALSEAN IGDFDEYWQQ RKLMADAAAE ATSVEKEDIG TRREMMGTTT RKSKFSGPCR ATNPIDRCWR CRQDWATDRK
101: RLARCAKGFG RNTTGGLAGK FYVVTDGTDD DVVNPRPGTL RWGVIQIEPL WITFAKTMII TLKEELIIRG DKTIDGRGVQ VRITNGAQLT LQFVNNVIIH
201: NIHINDIVSS NKDGGYVRDS PDHFGWRTVS DGDGITVFGS TNVWLDHLSL SNCQDGLIDV IAKSTGVTIS NCHLTNHNDV MLFSSSDKHP EDQIMQITVA
301: FNHFGRGLVQ RMPRCRWGFF HVVNNDYTHW LMYAIGGSKA PTIISQGNRY IAPPNLAAKQ VTKQHDTPES VWKNWVWHSE NDLFMEGAYF TVTGGQINRQ
401: FNKKDLIKPR NGSYVTRLTR YAGSLACTPG KPC
Best Arabidopsis Sequence Match ( AT1G14420.1 )
(BLAST)
001: MAAAFLNLGG YVFVFFSSFL AIVAPQVRGN VAVFDSYWTQ RQSDALKQTI GSYDPHPLNV TNHFNYHVNI AVDASESRND TRRELTQVRS GRKTHKSSGK
101: CLAYNPIDNC WRCDRNWANN RKKLADCVLG FGRRTTGGKD GPIYVVKDAS DNDLINPKPG TLRHAVTRDG PLWIIFARSM IIKLQQELMI TSDKTIDGRG
201: ARVYIMEGAG LTLQFVNNVI IHNIYVKHIV PGNGGLIRDS EAHIGLRTKS DGDGISLFGA TNIWIDHVSM TRCADGMIDA IDGSTAVTIS NSHFTDHQEV
301: MLFGARDEHV IDKKMQITVA FNHFGKRLEQ RMPRCRYGTI HVVNNDYTHW EMYAIGGNMN PTIISQGNRF IAPPNEEAKQ ITKREYTPYG EWKSWNWQSE
401: GDYFLNGAYF VQSGKANAWS SKPKTPLPNK FTIRPKPGTM VRKLTMDAGV LGCKLGEAC
Arabidopsis Description
AT59Probable pectate lyase 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9M9S2]
SUBAcon: [endoplasmic reticulum]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.