Factsheet for Bra026832.1-P

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 8
endoplasmic reticulum 5
vacuole 5
plasma membrane 5
golgi 5
nucleus 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	cytosol, nucleus, secretory
BaCelLo:	secretory
EpiLoc:	nucleus
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY53552	Canola	extracellular	98.23	89.7
Bra016700.1-P	Field mustard	endoplasmic reticulum, extracellular, plasma membrane	85.4	84.28
AT1G14420.1	Thale cress	endoplasmic reticulum	84.73	83.44
Bra026221.1-P	Field mustard	endoplasmic reticulum	84.07	82.97
Bra024811.1-P	Field mustard	extracellular	73.67	72.55
Bra017412.1-P	Field mustard	extracellular	73.45	72.33
Bra026583.1-P	Field mustard	endoplasmic reticulum, plasma membrane	73.01	72.21
TraesCS4A01G385700.1	Wheat	cytosol	29.65	61.19
KRH45851	Soybean	extracellular	58.41	58.54
KRH74782	Soybean	extracellular	57.3	57.81
VIT_14s0108g00030.t01	Wine grape	endoplasmic reticulum, extracellular, vacuole	55.75	57.4
GSMUA_Achr2P16830_001	Banana	endoplasmic reticulum, extracellular	55.31	57.08
VIT_01s0026g01670.t01	Wine grape	endoplasmic reticulum, extracellular, vacuole	55.75	56.88
GSMUA_Achr10P...	Banana	extracellular	48.89	56.67
KRH69345	Soybean	extracellular	55.75	56.38
PGSC0003DMT400017863	Potato	extracellular	54.42	55.66
Solyc03g058890.2.1	Tomato	extracellular	54.87	55.23
GSMUA_Achr10P...	Banana	cytosol	41.81	54.62
PGSC0003DMT400014086	Potato	extracellular	53.98	54.59
Solyc02g087670.2.1	Tomato	extracellular	53.76	54.48
PGSC0003DMT400003310	Potato	extracellular	53.76	54.48
GSMUA_Achr6P00830_001	Banana	endoplasmic reticulum, extracellular	52.65	54.46
PGSC0003DMT400017862	Potato	endoplasmic reticulum, extracellular	47.79	54.41
VIT_01s0026g01680.t01	Wine grape	endoplasmic reticulum, extracellular	53.1	54.18
Zm00001d000216_P001	Maize	golgi, vacuole	52.43	54.11
EES06507	Sorghum	golgi, vacuole	52.21	53.03
OQU75805	Sorghum	mitochondrion	51.55	52.71
TraesCS7D01G356700.1	Wheat	extracellular	51.77	52.7
Bra004073.1-P	Field mustard	extracellular	47.35	52.58
TraesCS7A01G365700.1	Wheat	endoplasmic reticulum, extracellular, vacuole	51.55	52.48
Os06t0583900-01	Rice	plasma membrane	51.99	52.46
Zm00001d046389_P007	Maize	endoplasmic reticulum, extracellular	50.22	52.42
TraesCS7A01G086600.1	Wheat	endoplasmic reticulum, extracellular	51.77	52.23
Os06t0144200-01	Rice	extracellular, plasma membrane	51.99	52.22
Bra004254.1-P	Field mustard	endoplasmic reticulum, extracellular, vacuole	46.9	52.22
Bra033980.1-P	Field mustard	extracellular	46.9	52.22
EER88571	Sorghum	endoplasmic reticulum, plasma membrane	52.43	52.2
Bra039081.1-P	Field mustard	extracellular, plastid	47.57	52.18
TraesCS7B01G261700.1	Wheat	endoplasmic reticulum, extracellular, vacuole	51.11	52.03
Os02t0214400-01	Rice	plasma membrane	51.33	52.02
HORVU6Hr1G038630.1	Barley	extracellular	46.46	51.85
Bra001011.1-P	Field mustard	endoplasmic reticulum, extracellular	53.98	51.8
Bra013833.1-P	Field mustard	endoplasmic reticulum, vacuole	46.46	51.72
Bra023504.1-P	Field mustard	extracellular	54.65	51.35
PGSC0003DMT400014085	Potato	extracellular, golgi	45.13	51.26
Solyc03g058910.2.1	Tomato	extracellular, golgi	45.13	51.26
Bra010482.1-P	Field mustard	endoplasmic reticulum, extracellular	46.02	51.23
HORVU7Hr1G085860.1	Barley	endoplasmic reticulum, extracellular, vacuole	50.22	51.13
Bra035852.1-P	Field mustard	extracellular	46.24	50.98
TraesCS6D01G170500.1	Wheat	golgi	47.79	50.82
TraesCS6B01G211900.1	Wheat	extracellular, golgi, vacuole	47.79	50.82
Bra006279.1-P	Field mustard	endoplasmic reticulum, extracellular	53.32	50.74
Bra020672.1-P	Field mustard	extracellular	46.68	50.6
Zm00001d036158_P001	Maize	endoplasmic reticulum, extracellular, vacuole	50.66	50.55
EER87830	Sorghum	endoplasmic reticulum, extracellular, vacuole	51.99	50.54
Bra038614.1-P	Field mustard	endoplasmic reticulum, extracellular, plasma membrane	46.02	50.36
Bra032696.1-P	Field mustard	endoplasmic reticulum, extracellular	45.8	50.12
Bra025274.1-P	Field mustard	extracellular	45.58	50.0
Os06t0144900-01	Rice	mitochondrion	52.21	49.89
Bra040809.1-P	Field mustard	endoplasmic reticulum, golgi, vacuole	46.68	49.88
Bra036155.1-P	Field mustard	extracellular	46.02	49.76
Bra019729.1-P	Field mustard	extracellular	40.71	49.73
Bra029614.1-P	Field mustard	endoplasmic reticulum, extracellular, vacuole	44.47	49.63
Bra033008.1-P	Field mustard	extracellular	43.58	49.5
Bra032494.1-P	Field mustard	extracellular	47.12	49.42
Bra030583.1-P	Field mustard	endoplasmic reticulum, extracellular, golgi	46.9	49.19
Bra015341.1-P	Field mustard	extracellular	46.9	49.19
Bra008721.1-P	Field mustard	endoplasmic reticulum, extracellular	54.2	49.1
Bra035588.1-P	Field mustard	extracellular	40.93	47.68
Bra032730.1-P	Field mustard	endoplasmic reticulum, extracellular, vacuole	47.57	47.67
Zm00001d036945_P001	Maize	endoplasmic reticulum	44.03	47.38
Bra019730.1-P	Field mustard	extracellular	39.82	46.75
TraesCS6A01G184500.2	Wheat	extracellular, golgi, vacuole	47.79	46.65
Bra019209.1-P	Field mustard	endoplasmic reticulum, extracellular	42.92	46.63
Bra013585.1-P	Field mustard	extracellular	40.49	46.56
Bra020859.1-P	Field mustard	extracellular	40.27	46.08
Bra015000.1-P	Field mustard	golgi, plasma membrane	45.35	45.86
HORVU7Hr1G019500.1	Barley	mitochondrion	51.77	45.0
Bra006976.1-P	Field mustard	cytosol	45.13	44.64
Bra012756.1-P	Field mustard	extracellular	37.39	43.44
Bra028549.1-P	Field mustard	plasma membrane	46.24	42.65
Bra015070.1-P	Field mustard	endoplasmic reticulum, extracellular	46.24	42.48
Bra007116.1-P	Field mustard	endoplasmic reticulum, extracellular	44.69	41.22
Bra003200.1-P	Field mustard	endoplasmic reticulum, extracellular	44.69	41.14
GSMUA_Achr7P08840_001	Banana	nucleus	56.19	37.91
Bra005799.1-P	Field mustard	extracellular, golgi	42.92	37.89
Bra009469.1-P	Field mustard	extracellular, plastid, vacuole	43.81	37.79
Solyc02g067450.2.1	Tomato	extracellular	51.33	37.66

Protein Annotations

KEGG:00040+4.2.2.2	Gene3D:2.160.20.10	MapMan:21.3.5.2	InterPro:AmbAllergen	EnsemblPlantsGene:Bra026832	EnsemblPlants:Bra026832.1
EnsemblPlants:Bra026832.1-P	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005975	GO:GO:0008150
GO:GO:0008152	GO:GO:0009056	GO:GO:0009987	GO:GO:0016829	GO:GO:0030570	GO:GO:0045490
GO:GO:0046872	InterPro:IPR012334	UniProt:M4EDH2	PFAM:PF00544	PFAM:PF04431	PRINTS:PR00807
PANTHER:PTHR31683	PANTHER:PTHR31683:SF14	InterPro:Pec_lyase	InterPro:Pec_lyase_N	InterPro:Pectin_lyas_fold	InterPro:Pectin_lyase_fold/virulence
SMART:SM00656	SUPFAM:SSF51126	SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI0002542DA2	SEG:seg

Description

AT1G14420 (E=2e-224) AT59 | AT59; lyase/ pectate lyase

Coordinates

chrA09:+:33912879..33914695

Molecular Weight (calculated)

50391.0 Da

IEP (calculated)

7.814

GRAVY (calculated)

-0.373

Length

452 amino acids

Sequence
(BLAST)

001: MAAAFLNIGG YTLVFLLAIL VPHVQSNVAV FDNYWTQRQG DALKQTIASY DPNPLNVTDH LNYHVALAVD ATESTNNTRR ELIGRKTQEG SGKCIAYNPI
101: DKCWRCDPNW EKNRKKLAEC VLGFGRKTTG GKDGPIYVVN DSSDDDLVNP KPGTLRHAVT RDGPLWIIFA NSMVIKLQQE LMITSNKTID GRGAKVYIME
201: GVGLTLQFVN NVIINNIYVK HIIPGNGGLI RDSEEHVGIR TKSDGDGISL FGATNVWIDH VSMTRCTDGM IDAIEGSTAV TISNSHFTDH QEVMLFGAKD
301: EHVIDKNMQI TVAFNHFGKR LEQRMPRCRF GTIHVVNNDY THWEMYAIGG NMNPTIISQG NRFIAPPNEQ AKEVTKREYT SYTDWKSWNW QSEGDYFLNG
401: AYFVQSGRPN AWSPKPKNPV PSKFAIRPKP GTMVRELTMD AGALGCEAGK AC

Best Arabidopsis Sequence Match ( AT1G14420.1 )
(BLAST)

001: MAAAFLNLGG YVFVFFSSFL AIVAPQVRGN VAVFDSYWTQ RQSDALKQTI GSYDPHPLNV TNHFNYHVNI AVDASESRND TRRELTQVRS GRKTHKSSGK
101: CLAYNPIDNC WRCDRNWANN RKKLADCVLG FGRRTTGGKD GPIYVVKDAS DNDLINPKPG TLRHAVTRDG PLWIIFARSM IIKLQQELMI TSDKTIDGRG
201: ARVYIMEGAG LTLQFVNNVI IHNIYVKHIV PGNGGLIRDS EAHIGLRTKS DGDGISLFGA TNIWIDHVSM TRCADGMIDA IDGSTAVTIS NSHFTDHQEV
301: MLFGARDEHV IDKKMQITVA FNHFGKRLEQ RMPRCRYGTI HVVNNDYTHW EMYAIGGNMN PTIISQGNRF IAPPNEEAKQ ITKREYTPYG EWKSWNWQSE
401: GDYFLNGAYF VQSGKANAWS SKPKTPLPNK FTIRPKPGTM VRKLTMDAGV LGCKLGEAC

Arabidopsis Description

AT59Probable pectate lyase 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9M9S2]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.