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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: golgi

Predictor Summary:
  • extracellular 4
  • endoplasmic reticulum 4
  • vacuole 5
  • plasma membrane 4
  • golgi 6
Predictors GFP MS/MS Papers
Winner Takes All:golgi
Any Predictor:secretory
iPSORT:secretory
MultiLoc:golgi
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:vacuole
YLoc:golgi
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS6B01G211900.1 Wheat extracellular, golgi, vacuole 96.0 96.0
TraesCS6A01G184500.2 Wheat extracellular, golgi, vacuole 94.59 86.83
HORVU6Hr1G038630.1 Barley extracellular 80.71 84.69
Os02t0214400-01 Rice plasma membrane 66.12 63.0
EES06507 Sorghum golgi, vacuole 64.24 61.35
TraesCS7D01G356700.1 Wheat extracellular 62.82 60.14
GSMUA_Achr10P... Banana cytosol 48.94 60.12
GSMUA_Achr10P... Banana extracellular 51.53 56.15
VIT_14s0108g00030.t01 Wine grape endoplasmic reticulum, extracellular, vacuole 57.18 55.35
VIT_17s0000g05740.t01 Wine grape extracellular 55.29 54.78
VIT_01s0026g01670.t01 Wine grape endoplasmic reticulum, extracellular, vacuole 55.76 53.5
KRH01130 Soybean extracellular 55.29 53.41
GSMUA_Achr6P00830_001 Banana endoplasmic reticulum, extracellular 54.82 53.32
GSMUA_Achr2P16830_001 Banana endoplasmic reticulum, extracellular 54.82 53.2
PGSC0003DMT400083135 Potato extracellular 54.35 53.1
Solyc03g113150.2.1 Tomato endoplasmic reticulum, golgi, vacuole 54.35 53.1
PGSC0003DMT400046723 Potato endoplasmic reticulum, golgi, vacuole 54.12 52.87
Solyc06g071020.2.1 Tomato extracellular 53.65 52.41
KRH18498 Soybean endoplasmic reticulum, extracellular, vacuole 53.88 51.69
VIT_01s0026g01680.t01 Wine grape endoplasmic reticulum, extracellular 53.88 51.69
KRH63402 Soybean extracellular 52.71 51.49
KRG93502 Soybean extracellular 53.41 51.24
PGSC0003DMT400002241 Potato extracellular 52.71 51.03
KRH54508 Soybean extracellular 39.53 50.45
PGSC0003DMT400017862 Potato endoplasmic reticulum, extracellular 47.06 50.38
Solyc01g010740.2.1 Tomato endoplasmic reticulum, extracellular 52.0 50.34
PGSC0003DMT400003310 Potato extracellular 52.0 49.55
Solyc02g087670.2.1 Tomato extracellular 52.0 49.55
TraesCS6D01G129200.1 Wheat endoplasmic reticulum, extracellular, vacuole 44.0 49.47
PGSC0003DMT400014085 Potato extracellular, golgi 46.12 49.25
PGSC0003DMT400014086 Potato extracellular 51.76 49.22
Solyc03g058890.2.1 Tomato extracellular 51.76 49.0
Solyc03g058910.2.1 Tomato extracellular, golgi 45.88 48.99
AT3G01270.1 Thale cress endoplasmic reticulum, extracellular 54.12 48.42
KRH74782 Soybean extracellular 50.82 48.21
CDX91953 Canola endoplasmic reticulum, extracellular 53.41 48.2
CDX74293 Canola endoplasmic reticulum, extracellular 53.41 48.2
PGSC0003DMT400017863 Potato extracellular 50.12 48.19
CDY28691 Canola endoplasmic reticulum, extracellular, vacuole 52.94 47.97
KRH45851 Soybean extracellular 50.82 47.89
Bra026832.1-P Field mustard extracellular 50.82 47.79
Bra001011.1-P Field mustard endoplasmic reticulum, extracellular 52.94 47.77
Bra016700.1-P Field mustard endoplasmic reticulum, extracellular, plasma membrane 51.29 47.6
CDX96854 Canola endoplasmic reticulum, extracellular, plasma membrane 51.29 47.6
AT1G14420.1 Thale cress endoplasmic reticulum 51.29 47.49
CDY68729 Canola endoplasmic reticulum, extracellular, plasma membrane 51.06 47.38
Bra026221.1-P Field mustard endoplasmic reticulum 51.06 47.38
TraesCS2D01G018000.1 Wheat golgi 52.24 46.93
CDY39314 Canola extracellular 50.59 46.84
AT5G15110.1 Thale cress endoplasmic reticulum, extracellular 52.0 46.82
CDY17432 Canola extracellular 50.35 46.62
CDY63769 Canola extracellular 52.47 46.56
Bra017412.1-P Field mustard extracellular 50.12 46.41
CDY04133 Canola extracellular 50.12 46.41
Bra006279.1-P Field mustard endoplasmic reticulum, extracellular 51.76 46.32
CDX78607 Canola endoplasmic reticulum, extracellular 51.76 46.32
CDX70590 Canola endoplasmic reticulum, extracellular 51.76 46.32
KRH69345 Soybean extracellular 48.71 46.31
CDX85564 Canola extracellular 51.53 46.3
Bra023504.1-P Field mustard extracellular 51.76 45.74
Bra026583.1-P Field mustard endoplasmic reticulum, plasma membrane 48.47 45.08
Solyc05g007080.2.1 Tomato extracellular 48.24 44.96
Bra008721.1-P Field mustard endoplasmic reticulum, extracellular 52.47 44.69
CDY66593 Canola endoplasmic reticulum, extracellular 52.47 44.69
CDX69550 Canola endoplasmic reticulum, extracellular 52.47 44.69
PGSC0003DMT400045436 Potato extracellular 48.24 44.66
CDY45202 Canola extracellular 48.24 44.66
Bra024811.1-P Field mustard extracellular 48.24 44.66
CDY03043 Canola extracellular 48.0 44.44
AT2G02720.1 Thale cress extracellular, vacuole 47.29 44.18
CDX81636 Canola endoplasmic reticulum 49.65 43.59
CDY53552 Canola extracellular 50.59 43.43
TraesCS1D01G142400.1 Wheat endoplasmic reticulum, extracellular, plasma membrane 48.24 42.89
GSMUA_Achr7P08840_001 Banana nucleus 54.82 34.78
Solyc02g067450.2.1 Tomato extracellular 48.24 33.28
CDY04136 Canola mitochondrion, nucleus 0.71 1.97
Protein Annotations
KEGG:00040+4.2.2.2Gene3D:2.160.20.10MapMan:21.3.5.2InterPro:AmbAllergenGO:GO:0003674GO:GO:0003824
GO:GO:0030570InterPro:IPR012334PFAM:PF00544PFAM:PF04431PRINTS:PR00807PANTHER:PTHR31683
PANTHER:PTHR31683:SF32InterPro:Pec_lyaseInterPro:Pec_lyase_NInterPro:Pectin_lyas_foldInterPro:Pectin_lyase_fold/virulenceSMART:SM00656
SUPFAM:SSF51126SignalP:SignalP-noTMTMHMM:TMhelixEnsemblPlantsGene:TraesCS6D01G170500EnsemblPlants:TraesCS6D01G170500.1SEG:seg
Description
No Description!
Coordinates
chr6D:-:157166704..157168206
Molecular Weight (calculated)
46983.7 Da
IEP (calculated)
9.174
GRAVY (calculated)
-0.426
Length
425 amino acids
Sequence
(BLAST)
001: MDRSLQWSRP ASLLLLGAAF LAAAAVASAN PAYNPDPYSV VDHFNRAVHR STSPRRALSS EKKSKKAKYT GPCMATNPID RCWRCRQDWA TDRQRMARCA
101: KGFGRETTGG LKGKIYIVTD ANDDDFTNPR PGTLRWGAVQ TEPLWIIFAR DMVINASQEI IIQSDKTIDG RGAQVHVANG GGLTIQHQNN VIINNLHVHG
201: IVHTDGGNVS MTATHSTIRT RADGDGVSIF NATKVWVDHL SMDNCEDGMI DVVAMSTAVT VSNTHLAHHN DVMLFGASDH KPEDKVMQVT VAFNHFGRGL
301: VQRMPRCRYG FFHVVNNDYT NWLMYAIGGS SAPTILSQGN RYRAPPNMAA KEATKREYAA ESEWKNWVWV SEGDLMVNDA YFTTSGGKIG QKLNGKDLIK
401: PKQGEYVRRL TRFAGPLDCN QGSPC
Best Arabidopsis Sequence Match ( AT1G14420.1 )
(BLAST)
001: MAAAFLNLGG YVFVFFSSFL AIVAPQVRGN VAVFDSYWTQ RQSDALKQTI GSYDPHPLNV TNHFNYHVNI AVDASESRND TRRELTQVRS GRKTHKSSGK
101: CLAYNPIDNC WRCDRNWANN RKKLADCVLG FGRRTTGGKD GPIYVVKDAS DNDLINPKPG TLRHAVTRDG PLWIIFARSM IIKLQQELMI TSDKTIDGRG
201: ARVYIMEGAG LTLQFVNNVI IHNIYVKHIV PGNGGLIRDS EAHIGLRTKS DGDGISLFGA TNIWIDHVSM TRCADGMIDA IDGSTAVTIS NSHFTDHQEV
301: MLFGARDEHV IDKKMQITVA FNHFGKRLEQ RMPRCRYGTI HVVNNDYTHW EMYAIGGNMN PTIISQGNRF IAPPNEEAKQ ITKREYTPYG EWKSWNWQSE
401: GDYFLNGAYF VQSGKANAWS SKPKTPLPNK FTIRPKPGTM VRKLTMDAGV LGCKLGEAC
Arabidopsis Description
AT59Probable pectate lyase 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9M9S2]
SUBAcon: [endoplasmic reticulum]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.