Factsheet for HORVU6Hr1G038630.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

plastid 1
extracellular 4
endoplasmic reticulum 2
vacuole 2
plasma membrane 2
golgi 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	plastid, secretory
ChloroP:	plastid
iPSORT:	secretory
MultiLoc:	extracellular
TargetP:	secretory
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6D01G170500.1	Wheat	golgi	84.69	80.71
TraesCS6B01G211900.1	Wheat	extracellular, golgi, vacuole	84.44	80.47
TraesCS6A01G184500.2	Wheat	extracellular, golgi, vacuole	85.43	74.73
Os02t0214400-01	Rice	plasma membrane	67.65	61.44
EES06507	Sorghum	golgi, vacuole	67.16	61.12
GSMUA_Achr10P...	Banana	cytosol	51.85	60.69
HORVU7Hr1G085860.1	Barley	endoplasmic reticulum, extracellular, vacuole	65.43	59.68
VIT_14s0108g00030.t01	Wine grape	endoplasmic reticulum, extracellular, vacuole	61.23	56.49
VIT_17s0000g05740.t01	Wine grape	extracellular	59.75	56.41
GSMUA_Achr10P...	Banana	extracellular	54.32	56.41
GSMUA_Achr6P00830_001	Banana	endoplasmic reticulum, extracellular	59.51	55.15
HORVU2Hr1G002930.1	Barley	cytosol	37.04	54.74
GSMUA_Achr2P16830_001	Banana	endoplasmic reticulum, extracellular	58.77	54.34
KRH01130	Soybean	extracellular	59.01	54.32
VIT_01s0026g01670.t01	Wine grape	endoplasmic reticulum, extracellular, vacuole	59.01	53.95
Solyc03g113150.2.1	Tomato	endoplasmic reticulum, golgi, vacuole	57.78	53.79
PGSC0003DMT400083135	Potato	extracellular	57.78	53.79
PGSC0003DMT400046723	Potato	endoplasmic reticulum, golgi, vacuole	57.53	53.56
KRH63402	Soybean	extracellular	56.79	52.87
Solyc06g071020.2.1	Tomato	extracellular	56.54	52.64
VIT_01s0026g01680.t01	Wine grape	endoplasmic reticulum, extracellular	57.28	52.37
KRH18498	Soybean	endoplasmic reticulum, extracellular, vacuole	56.54	51.69
PGSC0003DMT400003310	Potato	extracellular	56.79	51.57
KRG93502	Soybean	extracellular	56.05	51.24
Solyc02g087670.2.1	Tomato	extracellular	56.3	51.12
PGSC0003DMT400017862	Potato	endoplasmic reticulum, extracellular	49.88	50.88
KRH54508	Soybean	extracellular	41.73	50.75
PGSC0003DMT400002241	Potato	extracellular	54.81	50.57
PGSC0003DMT400014086	Potato	extracellular	55.8	50.56
Solyc03g058890.2.1	Tomato	extracellular	55.56	50.11
Solyc01g010740.2.1	Tomato	endoplasmic reticulum, extracellular	54.07	49.89
PGSC0003DMT400017863	Potato	extracellular	54.07	49.55
Solyc03g058910.2.1	Tomato	extracellular, golgi	48.64	49.5
KRH45851	Soybean	extracellular	55.06	49.45
PGSC0003DMT400014085	Potato	extracellular, golgi	48.15	48.99
KRH74782	Soybean	extracellular	52.84	47.77
AT3G01270.1	Thale cress	endoplasmic reticulum, extracellular	55.56	47.37
CDX96854	Canola	endoplasmic reticulum, extracellular, plasma membrane	53.33	47.16
Bra016700.1-P	Field mustard	endoplasmic reticulum, extracellular, plasma membrane	53.33	47.16
CDY68729	Canola	endoplasmic reticulum, extracellular, plasma membrane	53.09	46.94
Solyc05g007080.2.1	Tomato	extracellular	52.84	46.93
CDX74293	Canola	endoplasmic reticulum, extracellular	54.57	46.92
CDX91953	Canola	endoplasmic reticulum, extracellular	54.57	46.92
CDY28691	Canola	endoplasmic reticulum, extracellular, vacuole	54.32	46.91
AT1G14420.1	Thale cress	endoplasmic reticulum	53.09	46.84
HORVU5Hr1G005000.2	Barley	cytosol	39.26	46.63
CDX78607	Canola	endoplasmic reticulum, extracellular	54.57	46.53
CDX70590	Canola	endoplasmic reticulum, extracellular	54.57	46.53
Bra006279.1-P	Field mustard	endoplasmic reticulum, extracellular	54.57	46.53
Bra026832.1-P	Field mustard	extracellular	51.85	46.46
KRH69345	Soybean	extracellular	51.11	46.31
Bra001011.1-P	Field mustard	endoplasmic reticulum, extracellular	53.83	46.28
PGSC0003DMT400045436	Potato	extracellular	52.35	46.19
AT5G15110.1	Thale cress	endoplasmic reticulum, extracellular	53.58	45.97
HORVU6Hr1G027330.1	Barley	extracellular	43.21	45.81
CDY17432	Canola	extracellular	51.85	45.75
CDY04133	Canola	extracellular	51.85	45.75
Bra017412.1-P	Field mustard	extracellular	51.85	45.75
AT2G02720.1	Thale cress	extracellular, vacuole	51.36	45.71
CDX85564	Canola	extracellular	52.84	45.24
Bra026221.1-P	Field mustard	endoplasmic reticulum	51.11	45.2
Bra024811.1-P	Field mustard	extracellular	51.11	45.1
CDY45202	Canola	extracellular	51.11	45.1
CDY63769	Canola	extracellular	53.09	44.89
CDY03043	Canola	extracellular	50.86	44.88
Bra023504.1-P	Field mustard	extracellular	53.09	44.7
Bra008721.1-P	Field mustard	endoplasmic reticulum, extracellular	55.06	44.69
CDY66593	Canola	endoplasmic reticulum, extracellular	55.06	44.69
CDX69550	Canola	endoplasmic reticulum, extracellular	55.06	44.69
CDY39314	Canola	extracellular	50.62	44.66
Bra026583.1-P	Field mustard	endoplasmic reticulum, plasma membrane	49.88	44.2
HORVU7Hr1G019500.1	Barley	mitochondrion	56.54	44.04
CDX81636	Canola	endoplasmic reticulum	51.6	43.18
CDY53552	Canola	extracellular	51.85	42.42
HORVU2Hr1G002880.2	Barley	mitochondrion	53.33	42.35
HORVU1Hr1G038220.7	Barley	endoplasmic reticulum, extracellular	48.4	40.25
GSMUA_Achr7P08840_001	Banana	nucleus	59.51	35.97
Solyc02g067450.2.1	Tomato	extracellular	50.62	33.28
CDY04136	Canola	mitochondrion, nucleus	0.0	0.0

Protein Annotations

KEGG:00040+4.2.2.2	Gene3D:2.160.20.10	MapMan:21.3.5.2	UniProt:A0A287TZ72	InterPro:AmbAllergen	GO:GO:0003674
GO:GO:0003824	GO:GO:0005488	GO:GO:0005975	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056
GO:GO:0009987	GO:GO:0016829	GO:GO:0030570	GO:GO:0045490	GO:GO:0046872	EnsemblPlantsGene:HORVU6Hr1G038630
EnsemblPlants:HORVU6Hr1G038630.1	InterPro:IPR012334	PFAM:PF00544	PFAM:PF04431	PRINTS:PR00807	PANTHER:PTHR31683
PANTHER:PTHR31683:SF32	InterPro:Pec_lyase	InterPro:Pec_lyase_N	InterPro:Pectin_lyas_fold	InterPro:Pectin_lyase_fold/virulence	SMART:SM00656
SUPFAM:SSF51126	SignalP:SignalP-noTM	UniParc:UPI000B47EA19	SEG:seg	:	:

Description

Pectate lyase [Source:UniProtKB/TrEMBL;Acc:A0A287TZ72]

Coordinates

chrchr6H:+:197867450..197868879

Molecular Weight (calculated)

44965.5 Da

IEP (calculated)

9.488

GRAVY (calculated)

-0.399

Length

405 amino acids

Sequence
(BLAST)

001: SRPASLLLLG AAFLATAAVA SANPAYNPDP YSVVDNFNRR ACRSTSPRRA LSSEKKEKKQ KYNGPCLATN PIDRCWRCRK DWATDRQRLA RCAKGFGRGA
101: TGGLHGKIYI VTDPSDEDFT NPRPGTLRWG VVQLEPLWII FARDMIINPT QEIIIQSNKT LDGRGAQVHI ANGGGLTIQH QNNVIIHNLH VHDIKHTDGG
201: NVSLAANHAT IRTRADGDGV SIFNATNVWV DHLSMALCED GMIDVVAAST AITISNCHLT NHNDVMLFGA DDNKPEDKVM QVTVAFNHFG RGLVQRMPRC
301: RYGFFHVVNN DYTHWLMYAI GGSSEPTIIS QGNRYIAPPN MAAKQVTKRD YAPEAVWKNW VWRSEGDLMM NNAFFQTSGG QISQKLNGKD LIKPKPGEYV
401: TRLTR

Best Arabidopsis Sequence Match ( AT3G01270.1 )
(BLAST)

001: METARLFKLV CVICIASLIP TIRANVADET DEYWVNKANE ARKHTLMAYH PDPYEIVDHF HERHYDNSTD VEGTEEEKAV ASEEEDVIEM ISSPTNSTRR
101: SLTGRGKGKG KGKWSKLTGP CTASNPIDKC WRCQPDWARR RKKLVHCVRG FGYRTTGGKR GRIYVVTSPR DDDMVNPRPG TLRHAVIQKE PLWIVFKHDM
201: SIRLSQELMI TSDKTIDARG ANVHIAYGAG ITMQYVHNII IHGLHVHHIV KSSGGLIRDS INHFGHRGEA DGDGISIFGA TNIWLDHISM SKCQDGLIDA
301: IMGSTAITIS NSHFTHHNDV MLLGAQNNNM DDKKMQVTVA YNHFGKGLVQ RMPRVRWGFV HVVNNDYTHW ELYAIGGSQG PTILSHGNRF IAPPHKQHYR
401: EVTKRDYASE SEWKNWNWRS EKDVFMNNAY FRQSGNPHFK CSHSRQQMIK PKNGMAVSKL TKYAGALDCR VGKAC

Arabidopsis Description

Pectate lyase [Source:UniProtKB/TrEMBL;Acc:Q08A70]
SUBAcon: [endoplasmic reticulum,extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.