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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular

Predictor Summary:
  • nucleus 1
  • extracellular 6
  • endoplasmic reticulum 4
  • vacuole 4
  • plasma membrane 4
  • golgi 4
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:extracellular
Any Predictor:cytosol, nucleus, secretory
BaCelLo:nucleus
iPSORT:secretory
MultiLoc:extracellular
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:cytosol
YLoc:extracellular
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX85564 Canola extracellular 96.24 97.46
AT5G15110.1 Thale cress endoplasmic reticulum, extracellular 84.34 85.59
CDX70590 Canola endoplasmic reticulum, extracellular 83.51 84.21
CDX78607 Canola endoplasmic reticulum, extracellular 83.51 84.21
CDX69550 Canola endoplasmic reticulum, extracellular 84.34 80.96
CDY66593 Canola endoplasmic reticulum, extracellular 84.34 80.96
CDX74293 Canola endoplasmic reticulum, extracellular 78.08 79.41
CDX91953 Canola endoplasmic reticulum, extracellular 78.08 79.41
CDY28691 Canola endoplasmic reticulum, extracellular, vacuole 77.24 78.89
GSMUA_Achr10P... Banana cytosol 44.68 61.85
VIT_14s0108g00030.t01 Wine grape endoplasmic reticulum, extracellular, vacuole 56.37 61.5
VIT_01s0026g01670.t01 Wine grape endoplasmic reticulum, extracellular, vacuole 56.16 60.72
TraesCS4A01G385700.1 Wheat cytosol 27.14 59.36
VIT_01s0026g01680.t01 Wine grape endoplasmic reticulum, extracellular 54.28 58.69
GSMUA_Achr6P00830_001 Banana endoplasmic reticulum, extracellular 53.44 58.58
GSMUA_Achr2P16830_001 Banana endoplasmic reticulum, extracellular 52.61 57.53
KRH18498 Soybean endoplasmic reticulum, extracellular, vacuole 51.98 56.21
KRG93502 Soybean extracellular 51.36 55.53
GSMUA_Achr10P... Banana extracellular 45.09 55.38
PGSC0003DMT400003310 Potato extracellular 51.36 55.16
CDY05655 Canola extracellular 48.02 55.16
CDY33938 Canola extracellular 48.02 55.16
Solyc02g087670.2.1 Tomato extracellular 51.15 54.93
CDY56668 Canola extracellular 47.81 54.78
CDY19932 Canola extracellular 47.6 54.55
PGSC0003DMT400017863 Potato extracellular 50.31 54.52
PGSC0003DMT400014086 Potato extracellular 50.52 54.14
Solyc03g058890.2.1 Tomato extracellular 50.73 54.12
KRH01130 Soybean extracellular 49.69 54.09
CDY04133 Canola extracellular 51.77 54.03
CDY17432 Canola extracellular 51.77 54.03
CDY03419 Canola endoplasmic reticulum, extracellular 45.72 53.94
CDY70583 Canola cytosol 27.35 53.91
CDY28857 Canola extracellular 45.72 53.81
CDY56520 Canola extracellular 45.72 53.81
CDY12666 Canola extracellular 45.51 53.69
CDY32557 Canola extracellular 45.51 53.69
CDY34310 Canola endoplasmic reticulum, vacuole 45.51 53.69
OQU75805 Sorghum mitochondrion 49.48 53.62
CDY05305 Canola endoplasmic reticulum, extracellular, vacuole 46.56 53.61
CDY24654 Canola endoplasmic reticulum, extracellular, vacuole 46.56 53.61
TraesCS7A01G086600.1 Wheat endoplasmic reticulum, extracellular 50.1 53.57
Os06t0144200-01 Rice extracellular, plasma membrane 50.31 53.56
CDY11033 Canola endoplasmic reticulum, extracellular 45.3 53.45
CDY09356 Canola extracellular 50.94 53.39
CDY41679 Canola endoplasmic reticulum, plasma membrane 50.94 53.39
CDY56220 Canola endoplasmic reticulum, extracellular, vacuole 45.09 53.2
HORVU6Hr1G038630.1 Barley extracellular 44.89 53.09
CDY41506 Canola endoplasmic reticulum, extracellular, vacuole 45.72 53.03
Zm00001d000216_P001 Maize golgi, vacuole 48.43 52.97
CDX92652 Canola endoplasmic reticulum, extracellular 44.89 52.96
CDY03043 Canola extracellular 50.73 52.94
Os02t0214400-01 Rice plasma membrane 49.27 52.91
EER88571 Sorghum endoplasmic reticulum, plasma membrane 50.1 52.86
CDY68729 Canola endoplasmic reticulum, extracellular, plasma membrane 50.52 52.84
CDY45202 Canola extracellular 50.52 52.72
CDY01846 Canola endoplasmic reticulum, extracellular, vacuole 44.68 52.71
Os06t0583900-01 Rice plasma membrane 49.27 52.68
EES06507 Sorghum golgi, vacuole 48.85 52.58
TraesCS6D01G170500.1 Wheat golgi 46.56 52.47
CDY08948 Canola endoplasmic reticulum, extracellular 44.47 52.46
CDY24847 Canola endoplasmic reticulum, extracellular 44.47 52.46
CDX86615 Canola endoplasmic reticulum, extracellular, golgi 47.18 52.44
CDY15517 Canola endoplasmic reticulum, extracellular, golgi 47.18 52.44
CDY61137 Canola extracellular 47.18 52.44
CDX96854 Canola endoplasmic reticulum, extracellular, plasma membrane 50.1 52.4
CDX89799 Canola extracellular 46.97 52.2
CDX83690 Canola endoplasmic reticulum, extracellular, vacuole 44.89 52.18
CDY20049 Canola plastid, vacuole 44.89 52.18
CDY45254 Canola endoplasmic reticulum 49.9 52.18
CDY18330 Canola cytosol 15.87 52.05
CDY00156 Canola extracellular, plastid 44.68 51.94
PGSC0003DMT400017862 Potato endoplasmic reticulum, extracellular 43.01 51.89
CDY39314 Canola extracellular 49.69 51.85
TraesCS6B01G211900.1 Wheat extracellular, golgi, vacuole 45.93 51.76
CDY03964 Canola extracellular 44.47 51.7
CDY01119 Canola endoplasmic reticulum, extracellular 46.76 51.49
CDY46471 Canola endoplasmic reticulum, extracellular 47.18 51.48
CDY47327 Canola endoplasmic reticulum, extracellular 46.35 51.27
Zm00001d046389_P007 Maize endoplasmic reticulum, extracellular 46.35 51.27
CDY48132 Canola endoplasmic reticulum, golgi 45.72 51.17
CDY16732 Canola endoplasmic reticulum, golgi 45.51 50.93
HORVU7Hr1G085860.1 Barley endoplasmic reticulum, extracellular, vacuole 47.18 50.9
TraesCS7A01G365700.1 Wheat endoplasmic reticulum, extracellular, vacuole 47.18 50.9
TraesCS7D01G356700.1 Wheat extracellular 47.18 50.9
TraesCS7B01G261700.1 Wheat endoplasmic reticulum, extracellular, vacuole 46.76 50.45
EER87830 Sorghum endoplasmic reticulum, extracellular, vacuole 48.85 50.32
Os06t0144900-01 Rice mitochondrion 49.69 50.32
CDX81636 Canola endoplasmic reticulum 50.73 50.21
Zm00001d036158_P001 Maize endoplasmic reticulum, extracellular, vacuole 47.39 50.11
CDX98092 Canola extracellular 37.16 50.0
CDY53552 Canola extracellular 51.57 49.9
CDY34149 Canola extracellular 37.37 49.86
CDY53564 Canola endoplasmic reticulum, extracellular, vacuole 47.18 49.67
CDY01151 Canola endoplasmic reticulum, extracellular, vacuole 46.76 49.56
PGSC0003DMT400014085 Potato extracellular, golgi 41.13 49.5
Solyc03g058910.2.1 Tomato extracellular, golgi 41.13 49.5
CDY30040 Canola extracellular 36.74 49.44
CDX98091 Canola extracellular 37.79 48.79
CDY65626 Canola golgi 46.14 48.68
TraesCS6A01G184500.2 Wheat extracellular, golgi, vacuole 46.97 48.6
Zm00001d036945_P001 Maize endoplasmic reticulum 42.59 48.57
CDY66697 Canola endoplasmic reticulum, golgi 45.3 48.55
CDX82902 Canola endoplasmic reticulum, extracellular, vacuole 32.99 48.32
CDY30041 Canola extracellular 37.37 48.25
CDY18738 Canola endoplasmic reticulum, extracellular 47.81 48.11
HORVU7Hr1G019500.1 Barley mitochondrion 51.36 47.31
CDX77470 Canola golgi, plasma membrane 45.3 47.28
CDX79122 Canola extracellular 38.2 45.64
CDX77400 Canola endoplasmic reticulum, extracellular 46.76 45.53
CDX76388 Canola extracellular 37.58 44.12
CDY27438 Canola extracellular 37.58 44.12
CDX70244 Canola vacuole 40.08 43.54
CDY20748 Canola extracellular 34.86 43.04
CDY06557 Canola extracellular 34.66 42.89
CDX73573 Canola extracellular 41.54 41.81
CDX78152 Canola extracellular 41.34 41.6
CDX67560 Canola plasma membrane 42.17 41.22
CDX67615 Canola endoplasmic reticulum, extracellular, vacuole 41.75 40.73
CDY07515 Canola endoplasmic reticulum, extracellular, vacuole 41.75 40.65
CDY56964 Canola endoplasmic reticulum, extracellular, vacuole 41.13 40.04
CDY11284 Canola extracellular, golgi 40.71 38.24
CDX73426 Canola endoplasmic reticulum, extracellular, vacuole 40.92 37.91
GSMUA_Achr7P08840_001 Banana nucleus 52.82 37.76
CDY58428 Canola endoplasmic reticulum, golgi, plastid 40.29 37.48
CDY13312 Canola plasma membrane 41.54 37.13
CDY41382 Canola endoplasmic reticulum, golgi 40.29 36.62
Solyc02g067450.2.1 Tomato extracellular 45.93 35.71
CDY70492 Canola endoplasmic reticulum, extracellular 1.04 9.09
CDX81635 Canola mitochondrion, nucleus 0.42 1.32
CDX96858 Canola mitochondrion, nucleus 0.42 1.32
CDY04136 Canola mitochondrion, nucleus 0.42 1.32
CDY09355 Canola mitochondrion, nucleus 0.42 1.32
CDY41678 Canola mitochondrion, nucleus 0.42 1.32
CDY45199 Canola mitochondrion, nucleus 0.42 1.32
CDY45253 Canola mitochondrion, nucleus 0.42 1.32
CDY53553 Canola mitochondrion, nucleus 0.42 1.32
CDY66531 Canola mitochondrion, nucleus 0.42 1.32
Protein Annotations
KEGG:00040+4.2.2.2Gene3D:2.160.20.10MapMan:21.3.5.2GO:A0A078JEQ5UniProt:A0A078JEQ5InterPro:AmbAllergen
EnsemblPlants:CDY63769ProteinID:CDY63769ProteinID:CDY63769.1GO:GO:0003674GO:GO:0003824GO:GO:0005488
GO:GO:0005975GO:GO:0008150GO:GO:0008152GO:GO:0009056GO:GO:0009987GO:GO:0016829
GO:GO:0030570GO:GO:0045490GO:GO:0046872EnsemblPlantsGene:GSBRNA2T00039617001InterPro:IPR012334PFAM:PF00544
PFAM:PF04431PRINTS:PR00807PANTHER:PTHR31683PANTHER:PTHR31683:SF7InterPro:Pec_lyaseInterPro:Pec_lyase_N
InterPro:Pectin_lyas_foldInterPro:Pectin_lyase_fold/virulenceSMART:SM00656SUPFAM:SSF51126SignalP:SignalP-noTMUniPathway:UPA00545
UniParc:UPI0004EEF978SEG:seg::::
Description
BnaCnng42620DPectate lyase [Source:UniProtKB/TrEMBL;Acc:A0A078JEQ5]
Coordinates
chrLK034349:+:18097..20397
Molecular Weight (calculated)
54988.9 Da
IEP (calculated)
9.775
GRAVY (calculated)
-0.618
Length
479 amino acids
Sequence
(BLAST)
001: MEMARLLKLM FMFYIAGLIP TIRANFSELD EYWSKRAGEA REFTLQAYHS NPYEVVDHFH ERHYDNSTDV KETEEDSDDE KPEEVEDDVI EMVGNEMNST
101: RRILRGKSKG KGKRKGKWSK LKGPCTASNP IDKCWRCRSN WAKRRKNLVK CVRGFGHSTI GGKRGRIYVV TSNRDDDMVN PKPGTLRHAV IQKEPLWIIF
201: KNDMHIRLSQ ELMICSFKTI DARGANVHIA HGAGITIQFV RHVIIHGLHI HHICQSNGGM IRDSEGHFGM RTRADGDGIS IYGSSMIWLD HISMSKCQDG
301: LIDAIVGSTA ITISNSHFTH HNDVMLLGAQ NDNQGDKKMQ VTVAYNHFGK GLVQRMPRIR WGFVHVVNND YTHWELYAIG GSQAPTILSH GNRFVAPPHK
401: PHYREVTKRD YASEHEWKHW NWRSDKDMFM NGAYFRQSGN PHFKCHHTRK QMIKPKHGIA VSMLTKYAGA LDCRVGKRC
Best Arabidopsis Sequence Match ( AT1G14420.1 )
(BLAST)
001: MAAAFLNLGG YVFVFFSSFL AIVAPQVRGN VAVFDSYWTQ RQSDALKQTI GSYDPHPLNV TNHFNYHVNI AVDASESRND TRRELTQVRS GRKTHKSSGK
101: CLAYNPIDNC WRCDRNWANN RKKLADCVLG FGRRTTGGKD GPIYVVKDAS DNDLINPKPG TLRHAVTRDG PLWIIFARSM IIKLQQELMI TSDKTIDGRG
201: ARVYIMEGAG LTLQFVNNVI IHNIYVKHIV PGNGGLIRDS EAHIGLRTKS DGDGISLFGA TNIWIDHVSM TRCADGMIDA IDGSTAVTIS NSHFTDHQEV
301: MLFGARDEHV IDKKMQITVA FNHFGKRLEQ RMPRCRYGTI HVVNNDYTHW EMYAIGGNMN PTIISQGNRF IAPPNEEAKQ ITKREYTPYG EWKSWNWQSE
401: GDYFLNGAYF VQSGKANAWS SKPKTPLPNK FTIRPKPGTM VRKLTMDAGV LGCKLGEAC
Arabidopsis Description
AT59Probable pectate lyase 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9M9S2]
SUBAcon: [endoplasmic reticulum]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.