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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum, vacuole

Predictor Summary:
  • extracellular 5
  • endoplasmic reticulum 6
  • vacuole 6
  • plasma membrane 5
  • golgi 5
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum, vacuole
Any Predictor:cytosol, secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:endoplasmic reticulum
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:cytosol
YLoc:vacuole
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra013833.1-P Field mustard endoplasmic reticulum, vacuole 99.26 99.26
CDY03419 Canola endoplasmic reticulum, extracellular 98.77 98.77
CDY08948 Canola endoplasmic reticulum, extracellular 95.32 95.32
CDX92652 Canola endoplasmic reticulum, extracellular 95.07 95.07
CDY24847 Canola endoplasmic reticulum, extracellular 94.83 94.83
CDY11033 Canola endoplasmic reticulum, extracellular 94.33 94.33
AT4G24780.1 Thale cress endoplasmic reticulum, extracellular 92.61 92.16
PGSC0003DMT400039385 Potato extracellular 84.73 85.36
KRH03893 Soybean nucleus 85.22 85.22
KRH57176 Soybean nucleus 84.73 84.73
Solyc03g111690.2.1 Tomato nucleus 83.74 84.37
CDY18330 Canola cytosol 29.31 81.51
KRH63675 Soybean endoplasmic reticulum, extracellular, vacuole 81.53 81.13
KRH54276 Soybean endoplasmic reticulum, golgi, vacuole 80.79 80.39
PGSC0003DMT400069632 Potato vacuole 80.05 80.25
CDY41506 Canola endoplasmic reticulum, extracellular, vacuole 80.79 79.42
Solyc06g071840.1.1 Tomato vacuole 69.7 78.83
CDY28857 Canola extracellular 78.57 78.38
CDY56520 Canola extracellular 78.57 78.38
CDY56220 Canola endoplasmic reticulum, extracellular, vacuole 77.83 77.83
CDY12666 Canola extracellular 77.59 77.59
CDY01846 Canola endoplasmic reticulum, extracellular, vacuole 77.34 77.34
CDY32557 Canola extracellular 77.34 77.34
CDY70583 Canola cytosol 45.81 76.54
CDY48132 Canola endoplasmic reticulum, golgi 80.54 76.4
CDY16732 Canola endoplasmic reticulum, golgi 80.3 76.17
CDX83690 Canola endoplasmic reticulum, extracellular, vacuole 74.88 73.79
CDY65626 Canola golgi 81.28 72.69
CDY00156 Canola extracellular, plastid 73.15 72.09
CDY20049 Canola plastid, vacuole 73.15 72.09
CDY03964 Canola extracellular 72.66 71.6
CDY34149 Canola extracellular 61.82 69.92
CDY19932 Canola extracellular 71.43 69.38
CDY05305 Canola endoplasmic reticulum, extracellular, vacuole 70.94 69.23
CDY56668 Canola extracellular 71.18 69.14
CDY24654 Canola endoplasmic reticulum, extracellular, vacuole 70.44 68.75
CDY33938 Canola extracellular 70.44 68.59
CDY05655 Canola extracellular 70.2 68.35
CDY47327 Canola endoplasmic reticulum, extracellular 70.69 66.28
CDY01119 Canola endoplasmic reticulum, extracellular 70.69 65.98
CDX89799 Canola extracellular 68.47 64.5
CDY46471 Canola endoplasmic reticulum, extracellular 69.7 64.46
CDY61137 Canola extracellular 67.98 64.04
CDX86615 Canola endoplasmic reticulum, extracellular, golgi 67.73 63.81
CDY15517 Canola endoplasmic reticulum, extracellular, golgi 67.73 63.81
CDY53564 Canola endoplasmic reticulum, extracellular, vacuole 69.46 61.98
CDY01151 Canola endoplasmic reticulum, extracellular, vacuole 68.97 61.95
CDY18738 Canola endoplasmic reticulum, extracellular 69.46 59.24
CDX77400 Canola endoplasmic reticulum, extracellular 69.46 57.32
CDY66697 Canola endoplasmic reticulum, golgi 63.05 57.27
CDY06557 Canola extracellular 53.94 56.59
CDY20748 Canola extracellular 53.94 56.44
CDX77470 Canola golgi, plasma membrane 63.79 56.43
CDX82902 Canola endoplasmic reticulum, extracellular, vacuole 45.07 55.96
CDX98092 Canola extracellular 48.77 55.62
CDY30040 Canola extracellular 48.77 55.62
CDX98091 Canola extracellular 49.01 53.64
CDY30041 Canola extracellular 48.52 53.1
CDX70244 Canola vacuole 57.64 53.06
CDX79122 Canola extracellular 51.23 51.87
CDX78152 Canola extracellular 59.61 50.84
CDY27438 Canola extracellular 50.99 50.74
CDX73573 Canola extracellular 59.36 50.63
CDX76388 Canola extracellular 50.74 50.49
CDX67560 Canola plasma membrane 59.61 49.39
CDX67615 Canola endoplasmic reticulum, extracellular, vacuole 59.11 48.88
CDY07515 Canola endoplasmic reticulum, extracellular, vacuole 59.11 48.78
CDY56964 Canola endoplasmic reticulum, extracellular, vacuole 57.39 47.36
CDY11284 Canola extracellular, golgi 59.36 47.25
CDX74293 Canola endoplasmic reticulum, extracellular 54.43 46.92
CDX91953 Canola endoplasmic reticulum, extracellular 54.43 46.92
CDY28691 Canola endoplasmic reticulum, extracellular, vacuole 54.19 46.91
CDY17432 Canola extracellular 52.96 46.84
CDY58428 Canola endoplasmic reticulum, golgi, plastid 58.87 46.41
CDY04133 Canola extracellular 52.46 46.41
CDY41382 Canola endoplasmic reticulum, golgi 59.85 46.11
CDX70590 Canola endoplasmic reticulum, extracellular 53.94 46.11
CDX78607 Canola endoplasmic reticulum, extracellular 53.94 46.11
CDY41679 Canola endoplasmic reticulum, plasma membrane 51.48 45.73
CDY63769 Canola extracellular 53.69 45.51
CDY09356 Canola extracellular 50.99 45.3
CDX73426 Canola endoplasmic reticulum, extracellular, vacuole 57.64 45.26
CDX85564 Canola extracellular 52.71 45.24
CDX96854 Canola endoplasmic reticulum, extracellular, plasma membrane 50.99 45.2
CDY68729 Canola endoplasmic reticulum, extracellular, plasma membrane 50.99 45.2
CDY03043 Canola extracellular 50.74 44.88
CDY45202 Canola extracellular 50.49 44.66
CDY13312 Canola plasma membrane 58.62 44.4
CDY45254 Canola endoplasmic reticulum 50.0 44.32
CDY39314 Canola extracellular 49.75 44.01
CDX69550 Canola endoplasmic reticulum, extracellular 53.45 43.49
CDY66593 Canola endoplasmic reticulum, extracellular 53.45 43.49
CDX81636 Canola endoplasmic reticulum 50.25 42.15
CDY53552 Canola extracellular 51.23 42.02
CDY70492 Canola endoplasmic reticulum, extracellular 0.74 5.45
CDX81635 Canola mitochondrion, nucleus 0.74 1.97
CDX96858 Canola mitochondrion, nucleus 0.74 1.97
CDY04136 Canola mitochondrion, nucleus 0.74 1.97
CDY09355 Canola mitochondrion, nucleus 0.74 1.97
CDY41678 Canola mitochondrion, nucleus 0.74 1.97
CDY45199 Canola mitochondrion, nucleus 0.74 1.97
CDY45253 Canola mitochondrion, nucleus 0.74 1.97
CDY53553 Canola mitochondrion, nucleus 0.74 1.97
CDY66531 Canola mitochondrion, nucleus 0.74 1.97
Protein Annotations
KEGG:00040+4.2.2.2Gene3D:2.160.20.10MapMan:21.3.5.2GO:A0A078H6W1UniProt:A0A078H6W1InterPro:AmbAllergen
EnsemblPlants:CDY34310ProteinID:CDY34310ProteinID:CDY34310.1GO:GO:0003674GO:GO:0003824GO:GO:0005488
GO:GO:0005975GO:GO:0008150GO:GO:0008152GO:GO:0009056GO:GO:0009987GO:GO:0016829
GO:GO:0030570GO:GO:0045490GO:GO:0046872EnsemblPlantsGene:GSBRNA2T00056349001InterPro:IPR012334PFAM:PF00544
PRINTS:PR00807PANTHER:PTHR31683PANTHER:PTHR31683:SF28InterPro:Pec_lyaseInterPro:Pectin_lyas_foldInterPro:Pectin_lyase_fold/virulence
SMART:SM00656SUPFAM:SSF51126SignalP:SignalP-noTMUniPathway:UPA00545UniParc:UPI0004EE1BCESEG:seg
Description
BnaA01g14130DPectate lyase [Source:UniProtKB/TrEMBL;Acc:A0A078H6W1]
Coordinates
chrLK032332:-:263860..265729
Molecular Weight (calculated)
44703.0 Da
IEP (calculated)
7.771
GRAVY (calculated)
-0.299
Length
406 amino acids
Sequence
(BLAST)
001: MQTKKLFISI VSFLLYSPLM FSSPVPDPEA IVEEVHKSIN ASVAARRKLG YLSCSTGNPI DDCWRCDSNW EKNRQRLADC AIGFGKNAIG GRDGRIYVVT
101: DSGNDDPVTP KPGTLRHAVI QDEPLWIIFQ RDMTIHLKEE LIMNSFKTID GRGASVHIAG GPCITIQYVT NIIIHGIHIH DCKPGGNAMV RSSPRHFGWR
201: TISDGDGVSI FGGSHVWVDH CSLSNCDDGL IDAIMDSTAI TLSNNYMTHH DKVMLLGHSD TYTRDKNMQI TIAFNHFGEG LVQRMPRCRH GYFHVVNNDY
301: THWEMYAIGG SANPTINSQG NRFVAPNIRF SKEVTKHEDA PESEWKSWNW RSSGDLLLNG AFFTPSGGAS SSSYAKASSL GARPSSLVGP LTVGSGALNC
401: RKGSRC
Best Arabidopsis Sequence Match ( AT1G67750.1 )
(BLAST)
001: MRMTLVHLSL SLFSCLLLVL SPTFIASTPV SEPELVVQEV NEKINASRRN LGVLSCGTGN PIDDCWRCDP KWEKNRQRLA DCAIGFGKHA IGGRDGKIYV
101: VTDSSDKDVV NPKPGTLRHA VIQDEPLWII FARDMVIKLK EELIMNSFKT IDGRGASVHI AGGACITVQY VTNIIIHGVN IHDCKRKGNA YVRDSPSHYG
201: WRTASDGDAV SIFGGSHVWV DHCSLSNCAD GLIDAIHGST AITISNNYLS HHNKVMLLGH SDSYTRDKNM QVTIAFNHFG EGLVQRMPRC RHGYFHVVNN
301: DYTHWQMYAI GGSAAPTINS QGNRFLAPND HVFKEVTKYE DAPRSKWKKW NWRSEGDLFL NGAFFTPSGG GASSSYAKAS SLSARPSSLV ASVTSNAGAL
401: FCRKGSRC
Arabidopsis Description
Probable pectate lyase 5 [Source:UniProtKB/Swiss-Prot;Acc:Q9FXD8]
SUBAcon: [endoplasmic reticulum,vacuole]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.