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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular

Predictor Summary:
  • extracellular 8
  • endoplasmic reticulum 5
  • vacuole 5
  • plasma membrane 5
  • golgi 5
Predictors GFP MS/MS Papers
Winner Takes All:extracellular
Any Predictor:secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:extracellular
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:extracellular
YLoc:extracellular
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX98091 Canola extracellular 99.19 99.19
AT1G11920.1 Thale cress endoplasmic reticulum, extracellular 90.84 87.76
CDY30040 Canola extracellular 71.7 74.72
CDX98092 Canola extracellular 71.7 74.72
CDX82902 Canola endoplasmic reticulum, extracellular, vacuole 54.99 62.39
CDX79122 Canola extracellular 66.58 61.6
CDX76388 Canola extracellular 66.58 60.54
CDY27438 Canola extracellular 65.23 59.31
PGSC0003DMT400042396 Potato endoplasmic reticulum, extracellular, vacuole 60.65 56.68
CDY56220 Canola endoplasmic reticulum, extracellular, vacuole 56.06 51.23
CDY70583 Canola cytosol 33.42 51.03
CDY18330 Canola cytosol 19.95 50.68
CDY01846 Canola endoplasmic reticulum, extracellular, vacuole 55.26 50.49
CDY12666 Canola extracellular 54.99 50.25
CDY32557 Canola extracellular 54.72 50.0
CDY28857 Canola extracellular 54.18 49.39
CDY56520 Canola extracellular 54.18 49.39
CDY00156 Canola extracellular, plastid 54.18 48.79
CDX83690 Canola endoplasmic reticulum, extracellular, vacuole 54.18 48.79
CDY20049 Canola plastid, vacuole 54.18 48.79
CDY05655 Canola extracellular 54.72 48.68
CDY33938 Canola extracellular 54.72 48.68
CDY03964 Canola extracellular 53.91 48.54
CDY34310 Canola endoplasmic reticulum, vacuole 53.1 48.52
CDY56668 Canola extracellular 54.18 48.09
CDY03419 Canola endoplasmic reticulum, extracellular 52.56 48.03
CDY24847 Canola endoplasmic reticulum, extracellular 52.56 48.03
CDY08948 Canola endoplasmic reticulum, extracellular 52.56 48.03
CDY11033 Canola endoplasmic reticulum, extracellular 52.56 48.03
CDY19932 Canola extracellular 53.91 47.85
CDY05305 Canola endoplasmic reticulum, extracellular, vacuole 53.64 47.84
CDY24654 Canola endoplasmic reticulum, extracellular, vacuole 53.37 47.6
CDX92652 Canola endoplasmic reticulum, extracellular 52.02 47.54
CDX89799 Canola extracellular 54.18 46.64
CDY41506 Canola endoplasmic reticulum, extracellular, vacuole 51.75 46.49
CDY15517 Canola endoplasmic reticulum, extracellular, golgi 53.91 46.4
CDX86615 Canola endoplasmic reticulum, extracellular, golgi 53.91 46.4
CDY61137 Canola extracellular 53.64 46.17
CDY20748 Canola extracellular 48.25 46.13
CDY46471 Canola endoplasmic reticulum, extracellular 54.45 46.01
CDY06557 Canola extracellular 47.98 45.99
CDY34149 Canola extracellular 43.94 45.4
CDY47327 Canola endoplasmic reticulum, extracellular 52.29 44.8
CDY48132 Canola endoplasmic reticulum, golgi 51.48 44.63
CDY16732 Canola endoplasmic reticulum, golgi 51.48 44.63
CDY66697 Canola endoplasmic reticulum, golgi 53.64 44.52
CDY01119 Canola endoplasmic reticulum, extracellular 52.02 44.37
CDX77470 Canola golgi, plasma membrane 53.91 43.57
CDY53564 Canola endoplasmic reticulum, extracellular, vacuole 53.37 43.52
CDY01151 Canola endoplasmic reticulum, extracellular, vacuole 52.83 43.36
CDY65626 Canola golgi 52.56 42.95
CDY18738 Canola endoplasmic reticulum, extracellular 54.18 42.23
CDX70244 Canola vacuole 49.6 41.72
CDX77400 Canola endoplasmic reticulum, extracellular 54.45 41.06
CDY07515 Canola endoplasmic reticulum, extracellular, vacuole 52.29 39.43
CDX67615 Canola endoplasmic reticulum, extracellular, vacuole 52.02 39.31
CDY56964 Canola endoplasmic reticulum, extracellular, vacuole 50.67 38.21
CDY45254 Canola endoplasmic reticulum 47.17 38.21
CDY41679 Canola endoplasmic reticulum, plasma membrane 46.63 37.86
CDY09356 Canola extracellular 46.63 37.86
CDX78152 Canola extracellular 48.52 37.82
CDY45202 Canola extracellular 46.63 37.69
CDY39314 Canola extracellular 46.63 37.69
CDY04133 Canola extracellular 46.63 37.69
CDY17432 Canola extracellular 46.63 37.69
CDX85564 Canola extracellular 47.98 37.63
CDX73573 Canola extracellular 48.25 37.6
CDX74293 Canola endoplasmic reticulum, extracellular 47.71 37.58
CDX91953 Canola endoplasmic reticulum, extracellular 47.71 37.58
CDY28691 Canola endoplasmic reticulum, extracellular, vacuole 47.44 37.53
CDY03043 Canola extracellular 46.36 37.47
CDY63769 Canola extracellular 48.25 37.37
CDY68729 Canola endoplasmic reticulum, extracellular, plasma membrane 46.09 37.34
CDX96854 Canola endoplasmic reticulum, extracellular, plasma membrane 45.82 37.12
CDX70590 Canola endoplasmic reticulum, extracellular 47.44 37.05
CDX67560 Canola plasma membrane 48.52 36.73
CDX78607 Canola endoplasmic reticulum, extracellular 46.9 36.63
CDY11284 Canola extracellular, golgi 50.13 36.47
CDX73426 Canola endoplasmic reticulum, extracellular, vacuole 50.4 36.17
CDX69550 Canola endoplasmic reticulum, extracellular 48.25 35.87
CDY66593 Canola endoplasmic reticulum, extracellular 47.98 35.67
CDY58428 Canola endoplasmic reticulum, golgi, plastid 49.06 35.34
CDX81636 Canola endoplasmic reticulum 45.55 34.92
CDY41382 Canola endoplasmic reticulum, golgi 49.6 34.91
CDY53552 Canola extracellular 46.09 34.55
CDY13312 Canola plasma membrane 48.52 33.58
CDY70492 Canola endoplasmic reticulum, extracellular 1.62 10.91
CDY53553 Canola mitochondrion, nucleus 0.54 1.32
CDX96858 Canola mitochondrion, nucleus 0.54 1.32
CDY41678 Canola mitochondrion, nucleus 0.54 1.32
CDY09355 Canola mitochondrion, nucleus 0.54 1.32
CDY66531 Canola mitochondrion, nucleus 0.54 1.32
CDY45199 Canola mitochondrion, nucleus 0.54 1.32
CDX81635 Canola mitochondrion, nucleus 0.54 1.32
CDY04136 Canola mitochondrion, nucleus 0.54 1.32
CDY45253 Canola mitochondrion, nucleus 0.54 1.32
Protein Annotations
KEGG:00040+4.2.2.2Gene3D:2.160.20.10MapMan:21.3.5.2GO:A0A078GX20UniProt:A0A078GX20InterPro:AmbAllergen
EnsemblPlants:CDY30041ProteinID:CDY30041ProteinID:CDY30041.1GO:GO:0003674GO:GO:0003824GO:GO:0005488
GO:GO:0005975GO:GO:0008150GO:GO:0008152GO:GO:0009056GO:GO:0009987GO:GO:0016829
GO:GO:0030570GO:GO:0045490GO:GO:0046872EnsemblPlantsGene:GSBRNA2T00044578001InterPro:IPR012334PFAM:PF00544
PRINTS:PR00807PANTHER:PTHR31683PANTHER:PTHR31683:SF18InterPro:Pec_lyaseInterPro:Pectin_lyas_foldInterPro:Pectin_lyase_fold/virulence
SMART:SM00656SUPFAM:SSF51126SignalP:SignalP-noTMUniPathway:UPA00545UniParc:UPI0004EF2A74:
Description
BnaC05g09790DPectate lyase [Source:UniProtKB/TrEMBL;Acc:A0A078GX20]
Coordinates
chrLK032248:-:44006..45866
Molecular Weight (calculated)
41363.3 Da
IEP (calculated)
9.198
GRAVY (calculated)
-0.228
Length
371 amino acids
Sequence
(BLAST)
001: MASLLLTVSL LFAAFSYPLV EAAYYSNSYY TTPKPLLNPI DSCWRRNPNW ASNRRALADC AVGFGKAAIG GKYGSVYVVT NPSDNPENPR PGTLRHAVIQ
101: SKPLWITFAR DMVIVLQNEL IMNSYKTIDG RGAKVEIAYG ACITVQHLNH IIIHGISIHD CKPGKKGSDG DAIAIFDSSH IWIDHCFFSR CQDGLIDVLH
201: ASTAVTISNN YFTQHDKVML LGHNDNNVED RIMRVTIAFN HFGPGLIERM PRVRLGYAHI ANNRYEKWQM YAIGGSANPT IFSEGNYFVA SDDPSKKQVT
301: KRIESGYDSK RWKWRTSKDV FKNGAYFVQS GYGTVTPLYG RAEWFPVSHG SLVPSLTSSA GPLRCYSGRT C
Best Arabidopsis Sequence Match ( AT1G11920.1 )
(BLAST)
001: MASLFLTIIS LLFAAFSSSV VEAAYSNGYT IPKLLPNPID SCWRRNPYWA SNRRALADCA VGFGKSAVGG KYGSIYVVTN PSDDPENPRP GTLRYAVIQS
101: KPLWITFARD MVIVLRNELI MNSYKTIDGR GAKVEIAYGP CITIQHVSHV IIHGISIHDC KPGKSGRVRS SPTHVGSRKG SDGDAIAIFD SSHIWIDHCF
201: FSRCQDGLID VLHASTAVTI SNNYFTQHDK VMLLGHNDNN VEDKIMRVTI AFNHFGPGLI ERMPRVRRGY AHVANNRYEK WQMYAIGGSA DPTIFSEGNY
301: FVASDDPSKK QVTKRIDSGY DWKRWKWRTS KDVFKNGAYF VPSGYGTVTP LYGRAERFPV SHGSLVPLLT SSAGPLHCYS GRIC
Arabidopsis Description
Putative pectate lyase 2 [Source:UniProtKB/Swiss-Prot;Acc:O65388]
SUBAcon: [endoplasmic reticulum,extracellular]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.