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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion, nucleus

Predictor Summary:
  • nucleus 4
  • cytosol 2
  • mitochondrion 3
Predictors GFP MS/MS Papers
Winner Takes All:mitochondrion, nucleus
Any Predictor:cytosol, mitochondrion, nucleus
BaCelLo:nucleus
EpiLoc:cytosol
MultiLoc:mitochondrion
Plant-mPloc:cytosol, nucleus
PProwler:mitochondrion
TargetP:mitochondrion
WoLF PSORT:nucleus
YLoc:nucleus
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX81635 Canola mitochondrion, nucleus 100.0 100.0
CDY53553 Canola mitochondrion, nucleus 100.0 100.0
CDY66531 Canola mitochondrion, nucleus 100.0 100.0
CDY04136 Canola mitochondrion, nucleus 98.68 98.68
CDY09355 Canola mitochondrion, nucleus 98.68 98.68
CDY41678 Canola mitochondrion, nucleus 98.68 98.68
CDY45199 Canola mitochondrion, nucleus 98.68 98.68
CDY45253 Canola mitochondrion, nucleus 98.03 98.03
CDX73426 Canola endoplasmic reticulum, extracellular, vacuole 7.89 2.32
CDY56964 Canola endoplasmic reticulum, extracellular, vacuole 7.24 2.24
CDX67615 Canola endoplasmic reticulum, extracellular, vacuole 6.58 2.04
CDY53552 Canola extracellular 6.58 2.02
Solyc02g080910.2.1 Tomato extracellular 9.87 1.98
CDY11284 Canola extracellular, golgi 6.58 1.96
CDY58428 Canola endoplasmic reticulum, golgi, plastid 6.58 1.94
CDY41382 Canola endoplasmic reticulum, golgi 6.58 1.9
CDY07515 Canola endoplasmic reticulum, extracellular, vacuole 5.92 1.83
CDX73573 Canola extracellular 3.95 1.26
CDX78152 Canola extracellular 3.95 1.26
CDX81636 Canola endoplasmic reticulum 3.29 1.03
CDX67560 Canola plasma membrane 3.29 1.02
CDY13312 Canola plasma membrane 3.29 0.93
CDX77400 Canola endoplasmic reticulum, extracellular 2.63 0.81
CDX92652 Canola endoplasmic reticulum, extracellular 1.97 0.74
CDY01846 Canola endoplasmic reticulum, extracellular, vacuole 1.97 0.74
CDY03419 Canola endoplasmic reticulum, extracellular 1.97 0.74
CDY08948 Canola endoplasmic reticulum, extracellular 1.97 0.74
CDY11033 Canola endoplasmic reticulum, extracellular 1.97 0.74
CDY12666 Canola extracellular 1.97 0.74
CDY24847 Canola endoplasmic reticulum, extracellular 1.97 0.74
CDY32557 Canola extracellular 1.97 0.74
CDY34310 Canola endoplasmic reticulum, vacuole 1.97 0.74
CDY56220 Canola endoplasmic reticulum, extracellular, vacuole 1.97 0.74
CDY28857 Canola extracellular 1.97 0.74
CDY56520 Canola extracellular 1.97 0.74
CDY41506 Canola endoplasmic reticulum, extracellular, vacuole 1.97 0.73
CDY16732 Canola endoplasmic reticulum, golgi 1.97 0.7
CDY48132 Canola endoplasmic reticulum, golgi 1.97 0.7
CDX86615 Canola endoplasmic reticulum, extracellular, golgi 1.97 0.7
CDY65626 Canola golgi 1.97 0.66
CDX98092 Canola extracellular 1.32 0.56
CDY30040 Canola extracellular 1.32 0.56
CDY34149 Canola extracellular 1.32 0.56
CDX98091 Canola extracellular 1.32 0.54
CDY30041 Canola extracellular 1.32 0.54
KRH11474 Soybean extracellular 1.32 0.54
KRH02031 Soybean extracellular 1.32 0.5
CDY00156 Canola extracellular, plastid 1.32 0.49
CDY03964 Canola extracellular 1.32 0.49
CDY20049 Canola plastid, vacuole 1.32 0.49
CDY05305 Canola endoplasmic reticulum, extracellular, vacuole 1.32 0.48
CDY24654 Canola endoplasmic reticulum, extracellular, vacuole 1.32 0.48
CDY05655 Canola extracellular 1.32 0.48
CDY33938 Canola extracellular 1.32 0.48
CDY19932 Canola extracellular 1.32 0.48
CDY56668 Canola extracellular 1.32 0.48
CDX89799 Canola extracellular 1.32 0.46
CDY15517 Canola endoplasmic reticulum, extracellular, golgi 1.32 0.46
CDY61137 Canola extracellular 1.32 0.46
CDY47327 Canola endoplasmic reticulum, extracellular 1.32 0.46
CDY01119 Canola endoplasmic reticulum, extracellular 1.32 0.46
CDY46471 Canola endoplasmic reticulum, extracellular 1.32 0.46
CDY66697 Canola endoplasmic reticulum, golgi 1.32 0.45
CDY01151 Canola endoplasmic reticulum, extracellular, vacuole 1.32 0.44
CDY53564 Canola endoplasmic reticulum, extracellular, vacuole 1.32 0.44
CDY09356 Canola extracellular 1.32 0.44
CDY41679 Canola endoplasmic reticulum, plasma membrane 1.32 0.44
CDX96854 Canola endoplasmic reticulum, extracellular, plasma membrane 1.32 0.44
CDY45254 Canola endoplasmic reticulum 1.32 0.44
CDY68729 Canola endoplasmic reticulum, extracellular, plasma membrane 1.32 0.44
CDX77470 Canola golgi, plasma membrane 1.32 0.44
CDY03043 Canola extracellular 1.32 0.44
CDY04133 Canola extracellular 1.32 0.44
CDY17432 Canola extracellular 1.32 0.44
CDY39314 Canola extracellular 1.32 0.44
CDY45202 Canola extracellular 1.32 0.44
CDY28691 Canola endoplasmic reticulum, extracellular, vacuole 1.32 0.43
CDX74293 Canola endoplasmic reticulum, extracellular 1.32 0.42
CDX91953 Canola endoplasmic reticulum, extracellular 1.32 0.42
CDX85564 Canola extracellular 1.32 0.42
CDX70590 Canola endoplasmic reticulum, extracellular 1.32 0.42
CDX78607 Canola endoplasmic reticulum, extracellular 1.32 0.42
CDY18738 Canola endoplasmic reticulum, extracellular 1.32 0.42
CDY63769 Canola extracellular 1.32 0.42
CDX69550 Canola endoplasmic reticulum, extracellular 1.32 0.4
CDY66593 Canola endoplasmic reticulum, extracellular 1.32 0.4
VIT_10s0116g01160.t01 Wine grape endoplasmic reticulum, extracellular 0.66 0.26
CDY06557 Canola extracellular 0.66 0.26
CDY20748 Canola extracellular 0.66 0.26
KRH36488 Soybean extracellular 0.66 0.25
CDX79122 Canola extracellular 0.66 0.25
CDX76388 Canola extracellular 0.66 0.25
CDY27438 Canola extracellular 0.66 0.25
CDX83690 Canola endoplasmic reticulum, extracellular, vacuole 0.66 0.24
CDX70244 Canola vacuole 0.0 0.0
CDX82902 Canola endoplasmic reticulum, extracellular, vacuole 0.0 0.0
CDY18330 Canola cytosol 0.0 0.0
CDY70492 Canola endoplasmic reticulum, extracellular 0.0 0.0
CDY70583 Canola cytosol 0.0 0.0
KRH36487 Soybean extracellular 0.0 0.0
PGSC0003DMT400042395 Potato extracellular 0.0 0.0
Protein Annotations
MapMan:19.2.2.1.4Gene3D:3.10.110.10GO:A0A078IX24UniProt:A0A078IX24EnsemblPlants:CDX96858ProteinID:CDX96858
ProteinID:CDX96858.1ProteinID:CDY53553.1ProteinID:CDY66531.1GO:GO:0000166GO:GO:0003674GO:GO:0003824
GO:GO:0005488GO:GO:0005524GO:GO:0016740EnsemblPlantsGene:GSBRNA2T00103099001InterPro:IPR000608InterPro:IPR016135
PFAM:PF00179ScanProsite:PS00183PFscan:PS50127PANTHER:PTHR43898PANTHER:PTHR43898:SF5MetaCyc:PWY-7511
SMART:SM00212SUPFAM:SSF54495InterPro:UBQ-conjugat_E2InterPro:UBQ-conjugating_ASInterPro:UBQ-conjugating_enzyme/RWDUniPathway:UPA00143
UniParc:UPI00000013FE:::::
Description
BnaA08g24010DBnaA08g24010D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IX24]
Coordinates
chrLK031895:+:1267624..1269030
Molecular Weight (calculated)
17282.3 Da
IEP (calculated)
5.184
GRAVY (calculated)
-0.589
Length
152 amino acids
Sequence
(BLAST)
001: MSTPARKRLM RDFKRLQQDP PAGISGAPQD NNIMLWNAVI FGPDDTPWDG GTFKLSLQFS EDYPNKPPTV RFVSRMFHPN IYADGSICLD ILQNQWSPIY
101: DVAAILTSIQ SLLCDPNPNS PANSEAARMY SESKREYNRR VRDVVEQSWT AD
Best Arabidopsis Sequence Match ( AT1G14400.2 )
(BLAST)
001: MSTPARKRLM RDFKRLQQDP PAGISGAPQD NNIMLWNAVI FGPDDTPWDG GTFKLSLQFS EDYPNKPPTV RFVSRMFHPN IYADGSICLD ILQNQWSPIY
101: DVAAILTSIQ SLLCDPNPNS PANSEAARMY SESKREYNRR VRDVVEQSWT AD
Arabidopsis Description
UBC1Ubiquitin-conjugating enzyme E2 1 [Source:UniProtKB/Swiss-Prot;Acc:P25865]
SUBAcon: [mitochondrion,nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.