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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular

Predictor Summary:
  • extracellular 7
  • endoplasmic reticulum 6
  • vacuole 5
  • plasma membrane 5
  • golgi 5
Predictors GFP MS/MS Papers
Winner Takes All:extracellular
Any Predictor:secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:endoplasmic reticulum
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:extracellular
YLoc:extracellular
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra026221.1-P Field mustard endoplasmic reticulum 98.47 98.69
CDY45254 Canola endoplasmic reticulum 98.47 98.69
CDX96854 Canola endoplasmic reticulum, extracellular, plasma membrane 84.97 85.15
CDY68729 Canola endoplasmic reticulum, extracellular, plasma membrane 84.75 84.93
AT1G14420.1 Thale cress endoplasmic reticulum 82.79 82.79
CDX81636 Canola endoplasmic reticulum 80.17 76.03
CDY53552 Canola extracellular 81.92 75.96
CDY09356 Canola extracellular 73.86 74.18
CDY41679 Canola endoplasmic reticulum, plasma membrane 73.64 73.96
CDY45202 Canola extracellular 72.11 72.11
CDY04133 Canola extracellular 71.9 71.9
CDY17432 Canola extracellular 71.9 71.9
CDY03043 Canola extracellular 71.68 71.68
VIT_14s0108g00030.t01 Wine grape endoplasmic reticulum, extracellular, vacuole 55.99 58.54
TraesCS4A01G385700.1 Wheat cytosol 27.67 57.99
KRH45851 Soybean extracellular 56.64 57.65
VIT_01s0026g01670.t01 Wine grape endoplasmic reticulum, extracellular, vacuole 54.9 56.88
GSMUA_Achr2P16830_001 Banana endoplasmic reticulum, extracellular 54.25 56.85
Zm00001d000216_P001 Maize golgi, vacuole 53.81 56.39
KRH74782 Soybean extracellular 54.68 56.03
GSMUA_Achr6P00830_001 Banana endoplasmic reticulum, extracellular 53.16 55.84
GSMUA_Achr10P... Banana extracellular 47.06 55.38
KRH69345 Soybean extracellular 53.59 55.03
PGSC0003DMT400017863 Potato extracellular 52.72 54.75
GSMUA_Achr10P... Banana cytosol 41.18 54.62
Solyc03g058890.2.1 Tomato extracellular 53.38 54.57
OQU75805 Sorghum mitochondrion 52.51 54.52
VIT_01s0026g01680.t01 Wine grape endoplasmic reticulum, extracellular 51.63 53.5
PGSC0003DMT400014086 Potato extracellular 52.07 53.47
TraesCS7A01G086600.1 Wheat endoplasmic reticulum, extracellular 51.85 53.12
PGSC0003DMT400003310 Potato extracellular 51.2 52.69
EER88571 Sorghum endoplasmic reticulum, plasma membrane 52.07 52.64
Solyc02g087670.2.1 Tomato extracellular 50.98 52.47
Os06t0144200-01 Rice extracellular, plasma membrane 51.42 52.44
Zm00001d046389_P007 Maize endoplasmic reticulum, extracellular 49.46 52.42
PGSC0003DMT400017862 Potato endoplasmic reticulum, extracellular 45.32 52.39
EES06507 Sorghum golgi, vacuole 50.76 52.36
TraesCS7B01G261700.1 Wheat endoplasmic reticulum, extracellular, vacuole 50.33 52.03
TraesCS7D01G356700.1 Wheat extracellular 50.33 52.03
Os06t0583900-01 Rice plasma membrane 50.76 52.01
TraesCS7A01G365700.1 Wheat endoplasmic reticulum, extracellular, vacuole 49.89 51.58
Os02t0214400-01 Rice plasma membrane 50.11 51.57
CDY18330 Canola cytosol 16.34 51.37
CDY12666 Canola extracellular 45.1 50.99
CDY32557 Canola extracellular 45.1 50.99
Solyc03g058910.2.1 Tomato extracellular, golgi 44.01 50.75
CDY56220 Canola endoplasmic reticulum, extracellular, vacuole 44.88 50.74
HORVU7Hr1G085860.1 Barley endoplasmic reticulum, extracellular, vacuole 49.02 50.68
HORVU6Hr1G038630.1 Barley extracellular 44.66 50.62
CDY28857 Canola extracellular 44.88 50.61
TraesCS6D01G170500.1 Wheat golgi 46.84 50.59
CDY56520 Canola extracellular 44.66 50.37
CDX74293 Canola endoplasmic reticulum, extracellular 51.63 50.32
CDX91953 Canola endoplasmic reticulum, extracellular 51.63 50.32
CDY01846 Canola endoplasmic reticulum, extracellular, vacuole 44.44 50.25
TraesCS6B01G211900.1 Wheat extracellular, golgi, vacuole 46.41 50.12
Zm00001d036158_P001 Maize endoplasmic reticulum, extracellular, vacuole 49.46 50.11
CDX70590 Canola endoplasmic reticulum, extracellular 51.63 49.89
CDY28691 Canola endoplasmic reticulum, extracellular, vacuole 50.98 49.89
CDY70583 Canola cytosol 26.36 49.79
CDY05305 Canola endoplasmic reticulum, extracellular, vacuole 45.1 49.76
CDY00156 Canola extracellular, plastid 44.66 49.76
CDY20049 Canola plastid, vacuole 44.66 49.76
CDY08948 Canola endoplasmic reticulum, extracellular 44.01 49.75
CDY24847 Canola endoplasmic reticulum, extracellular 44.01 49.75
CDY34310 Canola endoplasmic reticulum, vacuole 44.01 49.75
CDY63769 Canola extracellular 51.85 49.69
Os06t0144900-01 Rice mitochondrion 51.2 49.68
CDY24654 Canola endoplasmic reticulum, extracellular, vacuole 44.88 49.52
CDX92652 Canola endoplasmic reticulum, extracellular 43.79 49.51
CDY03419 Canola endoplasmic reticulum, extracellular 43.79 49.51
PGSC0003DMT400014085 Potato extracellular, golgi 42.92 49.5
CDX85564 Canola extracellular 50.98 49.47
CDX78607 Canola endoplasmic reticulum, extracellular 50.98 49.26
CDY11033 Canola endoplasmic reticulum, extracellular 43.57 49.26
EER87830 Sorghum endoplasmic reticulum, extracellular, vacuole 49.89 49.25
CDY03964 Canola extracellular 44.01 49.03
CDY33938 Canola extracellular 44.44 48.92
CDY41506 Canola endoplasmic reticulum, extracellular, vacuole 44.01 48.91
CDX83690 Canola endoplasmic reticulum, extracellular, vacuole 43.79 48.79
CDY05655 Canola extracellular 44.23 48.68
CDY56668 Canola extracellular 44.23 48.56
CDY19932 Canola extracellular 44.01 48.33
CDX98092 Canola extracellular 37.47 48.31
CDY30040 Canola extracellular 37.47 48.31
CDX69550 Canola endoplasmic reticulum, extracellular 52.51 48.3
CDY66593 Canola endoplasmic reticulum, extracellular 52.29 48.1
CDY46471 Canola endoplasmic reticulum, extracellular 45.97 48.06
CDX89799 Canola extracellular 45.1 48.03
CDY34149 Canola extracellular 37.47 47.91
Zm00001d036945_P001 Maize endoplasmic reticulum 43.79 47.86
CDY47327 Canola endoplasmic reticulum, extracellular 45.1 47.81
CDY06557 Canola extracellular 40.3 47.8
CDX86615 Canola endoplasmic reticulum, extracellular, golgi 44.88 47.8
CDY15517 Canola endoplasmic reticulum, extracellular, golgi 44.88 47.8
CDY61137 Canola extracellular 44.88 47.8
CDY20748 Canola extracellular 40.09 47.42
CDY48132 Canola endoplasmic reticulum, golgi 44.01 47.2
CDX98091 Canola extracellular 38.13 47.17
CDY16732 Canola endoplasmic reticulum, golgi 43.79 46.96
CDY01119 Canola endoplasmic reticulum, extracellular 44.44 46.9
CDX82902 Canola endoplasmic reticulum, extracellular, vacuole 33.33 46.79
CDY30041 Canola extracellular 37.69 46.63
CDY01151 Canola endoplasmic reticulum, extracellular, vacuole 45.75 46.46
CDY53564 Canola endoplasmic reticulum, extracellular, vacuole 45.75 46.15
HORVU7Hr1G019500.1 Barley mitochondrion 51.63 45.58
TraesCS6A01G184500.2 Wheat extracellular, golgi, vacuole 45.75 45.36
CDY27438 Canola extracellular 39.87 44.85
CDX79122 Canola extracellular 39.0 44.64
CDX76388 Canola extracellular 39.65 44.61
CDY66697 Canola endoplasmic reticulum, golgi 43.36 44.52
CDY65626 Canola golgi 43.79 44.27
CDY18738 Canola endoplasmic reticulum, extracellular 45.75 44.12
CDX77470 Canola golgi, plasma membrane 43.79 43.79
CDX77400 Canola endoplasmic reticulum, extracellular 45.75 42.68
CDX70244 Canola vacuole 40.52 42.18
CDX73573 Canola extracellular 43.36 41.81
CDX78152 Canola extracellular 43.36 41.81
CDY07515 Canola endoplasmic reticulum, extracellular, vacuole 43.57 40.65
CDX67615 Canola endoplasmic reticulum, extracellular, vacuole 43.36 40.53
CDY56964 Canola endoplasmic reticulum, extracellular, vacuole 43.36 40.45
CDX67560 Canola plasma membrane 43.14 40.41
CDX73426 Canola endoplasmic reticulum, extracellular, vacuole 42.7 37.91
CDY58428 Canola endoplasmic reticulum, golgi, plastid 42.48 37.86
CDY11284 Canola extracellular, golgi 42.05 37.84
GSMUA_Achr7P08840_001 Banana nucleus 54.68 37.46
CDY13312 Canola plasma membrane 42.92 36.75
CDY41382 Canola endoplasmic reticulum, golgi 42.05 36.62
Solyc02g067450.2.1 Tomato extracellular 48.8 36.36
CDY70492 Canola endoplasmic reticulum, extracellular 1.31 10.91
CDX81635 Canola mitochondrion, nucleus 0.44 1.32
CDX96858 Canola mitochondrion, nucleus 0.44 1.32
CDY04136 Canola mitochondrion, nucleus 0.44 1.32
CDY09355 Canola mitochondrion, nucleus 0.44 1.32
CDY41678 Canola mitochondrion, nucleus 0.44 1.32
CDY45199 Canola mitochondrion, nucleus 0.44 1.32
CDY45253 Canola mitochondrion, nucleus 0.44 1.32
CDY53553 Canola mitochondrion, nucleus 0.44 1.32
CDY66531 Canola mitochondrion, nucleus 0.44 1.32
Protein Annotations
KEGG:00040+4.2.2.2Gene3D:2.160.20.10MapMan:21.3.5.2GO:A0A078HPI4UniProt:A0A078HPI4InterPro:AmbAllergen
EnsemblPlants:CDY39314ProteinID:CDY39314ProteinID:CDY39314.1GO:GO:0003674GO:GO:0003824GO:GO:0005488
GO:GO:0005975GO:GO:0008150GO:GO:0008152GO:GO:0009056GO:GO:0009987GO:GO:0016829
GO:GO:0030570GO:GO:0045490GO:GO:0046872EnsemblPlantsGene:GSBRNA2T00067730001InterPro:IPR012334PFAM:PF00544
PFAM:PF04431PRINTS:PR00807PANTHER:PTHR31683PANTHER:PTHR31683:SF14InterPro:Pec_lyaseInterPro:Pec_lyase_N
InterPro:Pectin_lyas_foldInterPro:Pectin_lyase_fold/virulenceSMART:SM00656SUPFAM:SSF51126SignalP:SignalP-noTMTMHMM:TMhelix
UniPathway:UPA00545UniParc:UPI0004EF1DB6::::
Description
BnaC05g10650DPectate lyase [Source:UniProtKB/TrEMBL;Acc:A0A078HPI4]
Coordinates
chrLK032445:+:93860..95905
Molecular Weight (calculated)
51568.9 Da
IEP (calculated)
9.930
GRAVY (calculated)
-0.373
Length
459 amino acids
Sequence
(BLAST)
001: MAAAFLNIGS YVFVFFLSSL ATLAPQVQAN IAVFDDYWTQ RQGDALKQTL ASFDPYPLNV TNHLNYHVAL ALDTTGSINS TRRELSQARR GRKMQNRRGK
101: CVAHNPIDKC WRCDRDWEKN RKKLAVCALG FGRRTSGGKD GPIYVVTDAS DDELISPRPG TLRHAVTRDG PLWIIFARSM VIKLQQELMM TSDKTIDGRG
201: ARVYIMGGSG LTLQFVNNVI VHNIYIKQIV PANGGLIRDS EQHIGLRTRS DGDGINLFGA TNVWIDHVSM TRCSDGMIDA ILGSTAVTVS NSHFTDHQEV
301: MLFGANDKHE IDKKMQITVA FNHFGKRLEQ RMPRVRFGTI HVVNNDYTHW EMYAIGGNMN PTIISHGNRF IAPPNEQAKQ ITKREYTSYV DWKLWNWQSE
401: GDYFLNGAYF VQSGKPNAWS PKPKNPIPNK FAIRPKPGTM VRKLTMDAGV LGCKQGQAC
Best Arabidopsis Sequence Match ( AT1G14420.1 )
(BLAST)
001: MAAAFLNLGG YVFVFFSSFL AIVAPQVRGN VAVFDSYWTQ RQSDALKQTI GSYDPHPLNV TNHFNYHVNI AVDASESRND TRRELTQVRS GRKTHKSSGK
101: CLAYNPIDNC WRCDRNWANN RKKLADCVLG FGRRTTGGKD GPIYVVKDAS DNDLINPKPG TLRHAVTRDG PLWIIFARSM IIKLQQELMI TSDKTIDGRG
201: ARVYIMEGAG LTLQFVNNVI IHNIYVKHIV PGNGGLIRDS EAHIGLRTKS DGDGISLFGA TNIWIDHVSM TRCADGMIDA IDGSTAVTIS NSHFTDHQEV
301: MLFGARDEHV IDKKMQITVA FNHFGKRLEQ RMPRCRYGTI HVVNNDYTHW EMYAIGGNMN PTIISQGNRF IAPPNEEAKQ ITKREYTPYG EWKSWNWQSE
401: GDYFLNGAYF VQSGKANAWS SKPKTPLPNK FTIRPKPGTM VRKLTMDAGV LGCKLGEAC
Arabidopsis Description
AT59Probable pectate lyase 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9M9S2]
SUBAcon: [endoplasmic reticulum]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.