Subcellular Localization
min:
: max
Winner_takes_all: golgi
Predictor Summary:
Predictor Summary:
- extracellular 5
- endoplasmic reticulum 5
- vacuole 6
- plasma membrane 5
- golgi 7
- plastid 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY41506 | Canola | endoplasmic reticulum, extracellular, vacuole | 88.55 | 97.34 |
| CDY48132 | Canola | endoplasmic reticulum, golgi | 86.34 | 91.59 |
| CDY16732 | Canola | endoplasmic reticulum, golgi | 85.9 | 91.12 |
| AT5G63180.1 | Thale cress | plastid | 84.14 | 88.43 |
| VIT_17s0000g09810.t01 | Wine grape | endoplasmic reticulum, extracellular, vacuole | 73.13 | 82.38 |
| CDY24847 | Canola | endoplasmic reticulum, extracellular | 73.13 | 81.77 |
| CDY03419 | Canola | endoplasmic reticulum, extracellular | 72.69 | 81.28 |
| CDY08948 | Canola | endoplasmic reticulum, extracellular | 72.69 | 81.28 |
| CDY34310 | Canola | endoplasmic reticulum, vacuole | 72.69 | 81.28 |
| VIT_01s0137g00240.t01 | Wine grape | extracellular | 72.03 | 81.14 |
| Solyc05g014000.2.1 | Tomato | extracellular, nucleus | 71.59 | 81.05 |
| PGSC0003DMT400027955 | Potato | extracellular | 71.59 | 81.05 |
| CDY11033 | Canola | endoplasmic reticulum, extracellular | 71.81 | 80.3 |
| CDX92652 | Canola | endoplasmic reticulum, extracellular | 71.59 | 80.05 |
| GSMUA_Achr6P28260_001 | Banana | endoplasmic reticulum, extracellular | 71.15 | 79.36 |
| CDY70583 | Canola | cytosol | 41.85 | 78.19 |
| CDY18330 | Canola | cytosol | 25.11 | 78.08 |
| CDY28857 | Canola | extracellular | 69.16 | 77.15 |
| CDY56520 | Canola | extracellular | 68.94 | 76.9 |
| CDY12666 | Canola | extracellular | 68.72 | 76.85 |
| CDY56220 | Canola | endoplasmic reticulum, extracellular, vacuole | 68.5 | 76.6 |
| CDY32557 | Canola | extracellular | 68.5 | 76.6 |
| CDY01846 | Canola | endoplasmic reticulum, extracellular, vacuole | 67.84 | 75.86 |
| CDX83690 | Canola | endoplasmic reticulum, extracellular, vacuole | 64.98 | 71.6 |
| CDY20049 | Canola | plastid, vacuole | 64.32 | 70.87 |
| CDY00156 | Canola | extracellular, plastid | 64.1 | 70.63 |
| CDY03964 | Canola | extracellular | 63.44 | 69.9 |
| CDY34149 | Canola | extracellular | 53.96 | 68.25 |
| CDY19932 | Canola | extracellular | 62.33 | 67.7 |
| CDY56668 | Canola | extracellular | 62.11 | 67.46 |
| CDY05305 | Canola | endoplasmic reticulum, extracellular, vacuole | 61.45 | 67.07 |
| CDY05655 | Canola | extracellular | 61.45 | 66.91 |
| CDY33938 | Canola | extracellular | 61.45 | 66.91 |
| CDY24654 | Canola | endoplasmic reticulum, extracellular, vacuole | 61.01 | 66.59 |
| CDY47327 | Canola | endoplasmic reticulum, extracellular | 62.78 | 65.82 |
| CDY01119 | Canola | endoplasmic reticulum, extracellular | 63.0 | 65.75 |
| CDX89799 | Canola | extracellular | 60.79 | 64.04 |
| CDY61137 | Canola | extracellular | 60.35 | 63.57 |
| CDY15517 | Canola | endoplasmic reticulum, extracellular, golgi | 60.13 | 63.34 |
| CDX86615 | Canola | endoplasmic reticulum, extracellular, golgi | 60.13 | 63.34 |
| CDY46471 | Canola | endoplasmic reticulum, extracellular | 61.01 | 63.1 |
| CDY53564 | Canola | endoplasmic reticulum, extracellular, vacuole | 61.23 | 61.1 |
| CDY01151 | Canola | endoplasmic reticulum, extracellular, vacuole | 60.79 | 61.06 |
| CDY18738 | Canola | endoplasmic reticulum, extracellular | 61.45 | 58.61 |
| CDY06557 | Canola | extracellular | 48.68 | 57.11 |
| CDY66697 | Canola | endoplasmic reticulum, golgi | 56.17 | 57.05 |
| CDY20748 | Canola | extracellular | 48.24 | 56.44 |
| CDX77400 | Canola | endoplasmic reticulum, extracellular | 61.01 | 56.3 |
| CDX77470 | Canola | golgi, plasma membrane | 56.83 | 56.21 |
| CDX82902 | Canola | endoplasmic reticulum, extracellular, vacuole | 40.31 | 55.96 |
| CDY30040 | Canola | extracellular | 42.73 | 54.49 |
| CDX98092 | Canola | extracellular | 42.73 | 54.49 |
| CDX98091 | Canola | extracellular | 43.17 | 52.83 |
| CDY30041 | Canola | extracellular | 42.95 | 52.56 |
| CDX70244 | Canola | vacuole | 49.78 | 51.25 |
| CDX78152 | Canola | extracellular | 53.52 | 51.05 |
| CDX73573 | Canola | extracellular | 53.3 | 50.84 |
| CDX79122 | Canola | extracellular | 44.71 | 50.62 |
| CDX67560 | Canola | plasma membrane | 54.19 | 50.2 |
| CDY27438 | Canola | extracellular | 44.93 | 50.0 |
| CDX76388 | Canola | extracellular | 44.71 | 49.75 |
| CDY07515 | Canola | endoplasmic reticulum, extracellular, vacuole | 52.2 | 48.17 |
| CDY28691 | Canola | endoplasmic reticulum, extracellular, vacuole | 49.34 | 47.76 |
| CDX67615 | Canola | endoplasmic reticulum, extracellular, vacuole | 51.54 | 47.66 |
| CDY56964 | Canola | endoplasmic reticulum, extracellular, vacuole | 51.1 | 47.15 |
| CDX74293 | Canola | endoplasmic reticulum, extracellular | 48.9 | 47.13 |
| CDX91953 | Canola | endoplasmic reticulum, extracellular | 48.9 | 47.13 |
| CDY11284 | Canola | extracellular, golgi | 52.86 | 47.06 |
| CDX70590 | Canola | endoplasmic reticulum, extracellular | 49.12 | 46.95 |
| CDX78607 | Canola | endoplasmic reticulum, extracellular | 49.12 | 46.95 |
| CDY17432 | Canola | extracellular | 46.92 | 46.41 |
| CDY63769 | Canola | extracellular | 48.68 | 46.14 |
| CDY04133 | Canola | extracellular | 46.48 | 45.97 |
| CDX85564 | Canola | extracellular | 47.8 | 45.88 |
| CDY58428 | Canola | endoplasmic reticulum, golgi, plastid | 51.98 | 45.83 |
| CDX73426 | Canola | endoplasmic reticulum, extracellular, vacuole | 51.76 | 45.45 |
| CDY68729 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 45.81 | 45.41 |
| CDY41679 | Canola | endoplasmic reticulum, plasma membrane | 45.37 | 45.08 |
| CDX96854 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 45.37 | 44.98 |
| CDY41382 | Canola | endoplasmic reticulum, golgi | 51.98 | 44.78 |
| CDY13312 | Canola | plasma membrane | 52.86 | 44.78 |
| CDY09356 | Canola | extracellular | 44.93 | 44.64 |
| CDX69550 | Canola | endoplasmic reticulum, extracellular | 48.9 | 44.49 |
| CDY66593 | Canola | endoplasmic reticulum, extracellular | 48.9 | 44.49 |
| CDY03043 | Canola | extracellular | 44.93 | 44.44 |
| CDY45202 | Canola | extracellular | 44.93 | 44.44 |
| CDY45254 | Canola | endoplasmic reticulum | 44.49 | 44.1 |
| CDY39314 | Canola | extracellular | 44.27 | 43.79 |
| CDX81636 | Canola | endoplasmic reticulum | 44.49 | 41.74 |
| CDY53552 | Canola | extracellular | 45.37 | 41.62 |
| CDY70492 | Canola | endoplasmic reticulum, extracellular | 0.44 | 3.64 |
| CDY09355 | Canola | mitochondrion, nucleus | 0.66 | 1.97 |
| CDY04136 | Canola | mitochondrion, nucleus | 0.66 | 1.97 |
| CDY66531 | Canola | mitochondrion, nucleus | 0.66 | 1.97 |
| CDX81635 | Canola | mitochondrion, nucleus | 0.66 | 1.97 |
| CDY41678 | Canola | mitochondrion, nucleus | 0.66 | 1.97 |
| CDY53553 | Canola | mitochondrion, nucleus | 0.66 | 1.97 |
| CDX96858 | Canola | mitochondrion, nucleus | 0.66 | 1.97 |
| CDY45253 | Canola | mitochondrion, nucleus | 0.66 | 1.97 |
| CDY45199 | Canola | mitochondrion, nucleus | 0.66 | 1.97 |
Protein Annotations
| KEGG:00040+4.2.2.2 | Gene3D:2.160.20.10 | MapMan:21.3.5.2 | GO:A0A078JIM4 | UniProt:A0A078JIM4 | InterPro:AmbAllergen |
| EnsemblPlants:CDY65626 | ProteinID:CDY65626 | ProteinID:CDY65626.1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005975 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009056 | GO:GO:0009987 |
| GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016829 | GO:GO:0030570 | GO:GO:0045490 | GO:GO:0046872 |
| EnsemblPlantsGene:GSBRNA2T00046941001 | InterPro:IPR012334 | PFAM:PF00544 | PRINTS:PR00807 | PANTHER:PTHR31683 | PANTHER:PTHR31683:SF28 |
| InterPro:Pec_lyase | InterPro:Pectin_lyas_fold | InterPro:Pectin_lyase_fold/virulence | SMART:SM00656 | SUPFAM:SSF51126 | TMHMM:TMhelix |
| UniPathway:UPA00545 | UniParc:UPI0004EF38CF | SEG:seg | : | : | : |
Description
BnaC03g74840DPectate lyase [Source:UniProtKB/TrEMBL;Acc:A0A078JIM4]
Coordinates
chrLK034867:-:7056..9248
Molecular Weight (calculated)
50704.9 Da
IEP (calculated)
7.044
GRAVY (calculated)
-0.299
Length
454 amino acids
Sequence
(BLAST)
(BLAST)
001: MRIKSFKVLV HVLYSLYVSL SFSRSLICFV LKPYNFFSKK PMNTMLNSSH ALFSLIFLYC IFFSSLALSS PVSDPELIVD EVHRKINESI SRRNLGYFSC
101: ETGNPIDDCW RCDKDWEKNR KRLADCGIGF GKNAIGGRDG EIYVVTDPGN DDPVNPKPGT LRYAVIQDEP LWIIFNRDMT IQLKEELIMN SFKTLDGRGA
201: SVHIAGGPCI TIQYVTNIII HGLHIHDCKQ GGNTYVRDSP EHYGWRTISD GDGVSIFGGS HVWVDHCSLS NCNDGLIDAI RGSTAITISN NYLTHHNKVM
301: LLGHSDTYEQ DKNMQVTIAF NHFGEGLVQR MPRCRHGYFH VVNNDYTHWE MYAIGGSANP TINSQGNRFV APDDSFSKEV TKHEDAPESE WSHWNWRSEG
401: DLMLNGAFFT LSGAGPTKSS SYSRASSLAA RPSSNVGEIT ISSGALSCKK GSHC
101: ETGNPIDDCW RCDKDWEKNR KRLADCGIGF GKNAIGGRDG EIYVVTDPGN DDPVNPKPGT LRYAVIQDEP LWIIFNRDMT IQLKEELIMN SFKTLDGRGA
201: SVHIAGGPCI TIQYVTNIII HGLHIHDCKQ GGNTYVRDSP EHYGWRTISD GDGVSIFGGS HVWVDHCSLS NCNDGLIDAI RGSTAITISN NYLTHHNKVM
301: LLGHSDTYEQ DKNMQVTIAF NHFGEGLVQR MPRCRHGYFH VVNNDYTHWE MYAIGGSANP TINSQGNRFV APDDSFSKEV TKHEDAPESE WSHWNWRSEG
401: DLMLNGAFFT LSGAGPTKSS SYSRASSLAA RPSSNVGEIT ISSGALSCKK GSHC
001: MFRPNSLLIP SNLSTTKSQR NTMLNSSYLS FALIFFCCIL FSALASSLPV SDPELVVEEV HRKINESISR RKLGFFSCGS GNPIDDCWRC DKDWEKNRKR
101: LADCGIGFGK NAIGGRDGEI YVVTDPGNDD PVNPRPGTLR YAVIQDEPLW IIFKRDMTIQ LKEELIMNSF KTLDGRGASV HISGGPCITI QYVTNIIIHG
201: LHIHDCKQGG NTYVRDSPEH YGYRTVSDGD GVSIFGGSHV WVDHCSLSNC NDGLIDAIRG STAITISNNY LTHHNKVMLL GHSDTYEQDK NMQVTIAFNH
301: FGEGLVQRMP RCRHGYFHVV NNDYTHWEMY AIGGSANPTI NSQGNRFLAP DDSSSKEVTK HEDAPEDEWR NWNWRSEGDL LLNGAFFTYS GAGPAKSSSY
401: SKASSLAARP SSHVGEITIA SGALSCKRGS HC
101: LADCGIGFGK NAIGGRDGEI YVVTDPGNDD PVNPRPGTLR YAVIQDEPLW IIFKRDMTIQ LKEELIMNSF KTLDGRGASV HISGGPCITI QYVTNIIIHG
201: LHIHDCKQGG NTYVRDSPEH YGYRTVSDGD GVSIFGGSHV WVDHCSLSNC NDGLIDAIRG STAITISNNY LTHHNKVMLL GHSDTYEQDK NMQVTIAFNH
301: FGEGLVQRMP RCRHGYFHVV NNDYTHWEMY AIGGSANPTI NSQGNRFLAP DDSSSKEVTK HEDAPEDEWR NWNWRSEGDL LLNGAFFTYS GAGPAKSSSY
401: SKASSLAARP SSHVGEITIA SGALSCKRGS HC
Arabidopsis Description
Probable pectate lyase 22 [Source:UniProtKB/Swiss-Prot;Acc:Q93Z25]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.