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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum

Predictor Summary:
  • extracellular 6
  • endoplasmic reticulum 7
  • vacuole 5
  • plasma membrane 5
  • golgi 5
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum
Any Predictor:secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:endoplasmic reticulum
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:endoplasmic reticulum
YLoc:extracellular
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY53552 Canola extracellular 96.07 93.94
CDX96854 Canola endoplasmic reticulum, extracellular, plasma membrane 78.72 83.19
CDY68729 Canola endoplasmic reticulum, extracellular, plasma membrane 78.31 82.75
AT1G14420.1 Thale cress endoplasmic reticulum 77.89 82.14
CDY45254 Canola endoplasmic reticulum 76.65 81.0
CDY39314 Canola extracellular 76.03 80.17
CDY03043 Canola extracellular 67.56 71.24
CDY17432 Canola extracellular 67.36 71.02
CDY45202 Canola extracellular 67.15 70.81
CDY09356 Canola extracellular 66.74 70.68
CDY04133 Canola extracellular 66.94 70.59
CDY41679 Canola endoplasmic reticulum, plasma membrane 66.53 70.46
TraesCS4A01G385700.1 Wheat cytosol 27.07 59.82
KRH45851 Soybean extracellular 53.51 57.43
KRH74782 Soybean extracellular 53.1 57.37
VIT_14s0108g00030.t01 Wine grape endoplasmic reticulum, extracellular, vacuole 51.86 57.18
GSMUA_Achr2P16830_001 Banana endoplasmic reticulum, extracellular 51.45 56.85
GSMUA_Achr10P... Banana extracellular 45.45 56.41
VIT_01s0026g01670.t01 Wine grape endoplasmic reticulum, extracellular, vacuole 51.45 56.21
KRH69345 Soybean extracellular 51.86 56.15
CDY18330 Canola cytosol 16.74 55.48
PGSC0003DMT400017863 Potato extracellular 50.41 55.2
Solyc03g058890.2.1 Tomato extracellular 50.62 54.57
VIT_01s0026g01680.t01 Wine grape endoplasmic reticulum, extracellular 49.59 54.18
GSMUA_Achr6P00830_001 Banana endoplasmic reticulum, extracellular 48.76 54.0
PGSC0003DMT400014086 Potato extracellular 49.79 53.91
PGSC0003DMT400003310 Potato extracellular 49.59 53.81
Solyc02g087670.2.1 Tomato extracellular 49.59 53.81
GSMUA_Achr10P... Banana cytosol 38.43 53.76
PGSC0003DMT400017862 Potato endoplasmic reticulum, extracellular 43.8 53.4
Zm00001d000216_P001 Maize golgi, vacuole 47.73 52.74
EES06507 Sorghum golgi, vacuole 48.35 52.58
CDY28857 Canola extracellular 44.01 52.33
TraesCS7D01G356700.1 Wheat extracellular 47.93 52.25
CDY56520 Canola extracellular 43.8 52.09
CDY56220 Canola endoplasmic reticulum, extracellular, vacuole 43.59 51.97
OQU75805 Sorghum mitochondrion 47.31 51.81
TraesCS7A01G365700.1 Wheat endoplasmic reticulum, extracellular, vacuole 47.52 51.8
CDX85564 Canola extracellular 50.62 51.8
Os02t0214400-01 Rice plasma membrane 47.73 51.79
CDY12666 Canola extracellular 43.39 51.72
CDY32557 Canola extracellular 43.39 51.72
HORVU6Hr1G038630.1 Barley extracellular 43.18 51.6
TraesCS7B01G261700.1 Wheat endoplasmic reticulum, extracellular, vacuole 47.31 51.58
Os06t0144200-01 Rice extracellular, plasma membrane 47.93 51.56
Zm00001d046389_P007 Maize endoplasmic reticulum, extracellular 46.07 51.5
CDY01846 Canola endoplasmic reticulum, extracellular, vacuole 43.18 51.48
CDY70583 Canola cytosol 25.83 51.44
Os06t0583900-01 Rice plasma membrane 47.52 51.34
CDX74293 Canola endoplasmic reticulum, extracellular 49.79 51.17
CDX91953 Canola endoplasmic reticulum, extracellular 49.79 51.17
CDX70590 Canola endoplasmic reticulum, extracellular 50.21 51.16
TraesCS7A01G086600.1 Wheat endoplasmic reticulum, extracellular 47.31 51.12
EER88571 Sorghum endoplasmic reticulum, plasma membrane 47.93 51.1
CDY00156 Canola extracellular, plastid 43.39 50.97
CDY28691 Canola endoplasmic reticulum, extracellular, vacuole 49.38 50.96
PGSC0003DMT400014085 Potato extracellular, golgi 41.74 50.75
Solyc03g058910.2.1 Tomato extracellular, golgi 41.74 50.75
CDX78607 Canola endoplasmic reticulum, extracellular 49.79 50.74
CDY63769 Canola extracellular 50.21 50.73
CDY20049 Canola plastid, vacuole 43.18 50.73
HORVU7Hr1G085860.1 Barley endoplasmic reticulum, extracellular, vacuole 46.49 50.68
CDY03419 Canola endoplasmic reticulum, extracellular 42.15 50.25
CDY08948 Canola endoplasmic reticulum, extracellular 42.15 50.25
CDY24847 Canola endoplasmic reticulum, extracellular 42.15 50.25
CDY34310 Canola endoplasmic reticulum, vacuole 42.15 50.25
CDY03964 Canola extracellular 42.36 49.76
TraesCS6D01G170500.1 Wheat golgi 43.59 49.65
CDX92652 Canola endoplasmic reticulum, extracellular 41.53 49.51
EER87830 Sorghum endoplasmic reticulum, extracellular, vacuole 47.52 49.46
TraesCS6B01G211900.1 Wheat extracellular, golgi, vacuole 43.39 49.41
CDY05655 Canola extracellular 42.56 49.4
CDY33938 Canola extracellular 42.56 49.4
CDX83690 Canola endoplasmic reticulum, extracellular, vacuole 41.94 49.27
CDY11033 Canola endoplasmic reticulum, extracellular 41.32 49.26
CDY41506 Canola endoplasmic reticulum, extracellular, vacuole 41.94 49.15
Zm00001d036158_P001 Maize endoplasmic reticulum, extracellular, vacuole 45.87 49.01
Os06t0144900-01 Rice mitochondrion 47.73 48.84
CDY56668 Canola extracellular 42.15 48.8
CDY24654 Canola endoplasmic reticulum, extracellular, vacuole 41.94 48.8
CDX98092 Canola extracellular 35.74 48.6
CDY19932 Canola extracellular 41.94 48.56
CDY05305 Canola endoplasmic reticulum, extracellular, vacuole 41.74 48.56
CDY30040 Canola extracellular 35.54 48.31
CDX69550 Canola endoplasmic reticulum, extracellular 49.79 48.3
CDX86615 Canola endoplasmic reticulum, extracellular, golgi 42.98 48.26
CDY66593 Canola endoplasmic reticulum, extracellular 49.59 48.1
CDX89799 Canola extracellular 42.77 48.03
CDY15517 Canola endoplasmic reticulum, extracellular, golgi 42.77 48.03
CDY34149 Canola extracellular 35.54 47.91
CDY48132 Canola endoplasmic reticulum, golgi 42.36 47.9
CDY61137 Canola extracellular 42.56 47.8
CDY20748 Canola extracellular 38.22 47.68
CDY16732 Canola endoplasmic reticulum, golgi 42.15 47.66
CDY06557 Canola extracellular 38.02 47.55
CDY46471 Canola endoplasmic reticulum, extracellular 42.98 47.38
CDX82902 Canola endoplasmic reticulum, extracellular, vacuole 31.82 47.09
Zm00001d036945_P001 Maize endoplasmic reticulum 40.7 46.9
CDY47327 Canola endoplasmic reticulum, extracellular 41.94 46.88
CDY01119 Canola endoplasmic reticulum, extracellular 41.74 46.44
CDY01151 Canola endoplasmic reticulum, extracellular, vacuole 43.18 46.24
CDY53564 Canola endoplasmic reticulum, extracellular, vacuole 43.39 46.15
CDX98091 Canola extracellular 35.33 46.09
TraesCS6A01G184500.2 Wheat extracellular, golgi, vacuole 43.8 45.79
CDY30041 Canola extracellular 34.92 45.55
CDY66697 Canola endoplasmic reticulum, golgi 41.74 45.19
CDX79122 Canola extracellular 37.19 44.89
CDY27438 Canola extracellular 37.6 44.61
CDY65626 Canola golgi 41.74 44.49
CDX76388 Canola extracellular 37.19 44.12
CDX77470 Canola golgi, plasma membrane 41.74 44.01
CDY18738 Canola endoplasmic reticulum, extracellular 43.18 43.91
HORVU7Hr1G019500.1 Barley mitochondrion 47.11 43.85
CDX73573 Canola extracellular 42.56 43.28
CDX78152 Canola extracellular 42.56 43.28
CDX70244 Canola vacuole 39.26 43.08
CDX67560 Canola plasma membrane 42.98 42.45
CDX77400 Canola endoplasmic reticulum, extracellular 42.98 42.28
CDY07515 Canola endoplasmic reticulum, extracellular, vacuole 41.74 41.06
CDX67615 Canola endoplasmic reticulum, extracellular, vacuole 41.53 40.94
CDY56964 Canola endoplasmic reticulum, extracellular, vacuole 41.53 40.85
CDX73426 Canola endoplasmic reticulum, extracellular, vacuole 41.12 38.49
CDY13312 Canola plasma membrane 42.56 38.43
CDY11284 Canola extracellular, golgi 40.29 38.24
GSMUA_Achr7P08840_001 Banana nucleus 52.69 38.06
CDY58428 Canola endoplasmic reticulum, golgi, plastid 40.08 37.67
CDY41382 Canola endoplasmic reticulum, golgi 40.91 37.57
Solyc02g067450.2.1 Tomato extracellular 47.11 37.01
CDY70492 Canola endoplasmic reticulum, extracellular 0.83 7.27
CDX81635 Canola mitochondrion, nucleus 1.03 3.29
CDX96858 Canola mitochondrion, nucleus 1.03 3.29
CDY04136 Canola mitochondrion, nucleus 1.03 3.29
CDY09355 Canola mitochondrion, nucleus 1.03 3.29
CDY41678 Canola mitochondrion, nucleus 1.03 3.29
CDY45199 Canola mitochondrion, nucleus 1.03 3.29
CDY45253 Canola mitochondrion, nucleus 1.03 3.29
CDY53553 Canola mitochondrion, nucleus 1.03 3.29
CDY66531 Canola mitochondrion, nucleus 1.03 3.29
Protein Annotations
KEGG:00040+4.2.2.2Gene3D:2.160.20.10MapMan:21.3.5.2GO:A0A078CWV3InterPro:AmbAllergenEnsemblPlants:CDX81636
ProteinID:CDX81636ProteinID:CDX81636.1GO:GO:0003674GO:GO:0003824GO:GO:0005975GO:GO:0008150
GO:GO:0008152GO:GO:0009056GO:GO:0009987GO:GO:0030570GO:GO:0045490EnsemblPlantsGene:GSBRNA2T00136549001
InterPro:IPR012334PFAM:PF00544PFAM:PF04431PRINTS:PR00807PANTHER:PTHR31683PANTHER:PTHR31683:SF14
InterPro:Pec_lyaseInterPro:Pec_lyase_NInterPro:Pectin_lyas_foldInterPro:Pectin_lyase_fold/virulenceSMART:SM00656SUPFAM:SSF51126
SignalP:SignalP-noTMTMHMM:TMhelixUniPathway:UPA00545UniParc:UPI0004EEA27FSEG:seg:
Description
BnaC08g39650D
Coordinates
chrLK031826:-:106514..111238
Molecular Weight (calculated)
54507.1 Da
IEP (calculated)
7.169
GRAVY (calculated)
-0.340
Length
484 amino acids
Sequence
(BLAST)
001: MAATFLNIGG YTLVFLSVIL VPHVQANVAI FDNYWKQRQG DALKQTIASY DPNPLNVTDH LNYHVALAVD ATESTNNTRR ELIGRETQEG SGKCIAYNPI
101: DKCWRCDPNW EKNRKKLVEC VLGFGRKTTG GKDGPIYVVN DSSDEDLVNP KPGTLRHAVT RDGPLWIIFA NSMVIKLQQE LMITSNKTID GRGARVYIME
201: GAGLTQQFVN NVIINNIYVK HIIPGNGGLI RDSEEHVGLR TKSDGDGISL FGATNVWIDH VSMTRCTDGM IDAIEGSTAV TISNSHFTDH QEVMLFGAKD
301: EHVIDKNMQI TVAFNHFGKR LEQRMPRCRF GTIHVVNNDY THWEMYAIGG NMNPTIISQG NRFIAPPNEQ AKEVTKREYT SYTDWKSWNW QSEGDYFLNG
401: AYFVQSGRPN AWSPKPKNPV PSKFAIRPKP GTMVRELTMD AGVLGCEPEC IYNEQFQIII IFIRIHYISS CPMCLPLILN QKPE
Best Arabidopsis Sequence Match ( AT1G14420.1 )
(BLAST)
001: MAAAFLNLGG YVFVFFSSFL AIVAPQVRGN VAVFDSYWTQ RQSDALKQTI GSYDPHPLNV TNHFNYHVNI AVDASESRND TRRELTQVRS GRKTHKSSGK
101: CLAYNPIDNC WRCDRNWANN RKKLADCVLG FGRRTTGGKD GPIYVVKDAS DNDLINPKPG TLRHAVTRDG PLWIIFARSM IIKLQQELMI TSDKTIDGRG
201: ARVYIMEGAG LTLQFVNNVI IHNIYVKHIV PGNGGLIRDS EAHIGLRTKS DGDGISLFGA TNIWIDHVSM TRCADGMIDA IDGSTAVTIS NSHFTDHQEV
301: MLFGARDEHV IDKKMQITVA FNHFGKRLEQ RMPRCRYGTI HVVNNDYTHW EMYAIGGNMN PTIISQGNRF IAPPNEEAKQ ITKREYTPYG EWKSWNWQSE
401: GDYFLNGAYF VQSGKANAWS SKPKTPLPNK FTIRPKPGTM VRKLTMDAGV LGCKLGEAC
Arabidopsis Description
AT59Probable pectate lyase 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9M9S2]
SUBAcon: [endoplasmic reticulum]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.