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Maize
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Maize
Subcellular Localization
min:
: max

 
Winner_takes_all: golgi, vacuole

Predictor Summary:
  • mitochondrion 2
  • extracellular 3
  • endoplasmic reticulum 3
  • vacuole 4
  • plasma membrane 3
  • golgi 4
Predictors GFP MS/MS Papers
Winner Takes All:golgi, vacuole
Any Predictor:mitochondrion, secretory
iPSORT:mitochondrion
MultiLoc:mitochondrion
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:vacuole
YLoc:golgi
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
OQU75805 Sorghum mitochondrion 88.36 87.56
TraesCS4A01G385700.1 Wheat cytosol 40.64 81.28
Os06t0144200-01 Rice extracellular, plasma membrane 79.91 77.78
TraesCS7A01G086600.1 Wheat endoplasmic reticulum, extracellular 76.94 75.22
Zm00001d036158_P001 Maize endoplasmic reticulum, extracellular, vacuole 69.63 67.33
HORVU7Hr1G019500.1 Barley mitochondrion 77.85 65.58
GSMUA_Achr2P16830_001 Banana endoplasmic reticulum, extracellular 60.05 60.05
GSMUA_Achr6P00830_001 Banana endoplasmic reticulum, extracellular 59.82 59.95
GSMUA_Achr10P... Banana extracellular 53.2 59.74
VIT_14s0108g00030.t01 Wine grape endoplasmic reticulum, extracellular, vacuole 59.59 59.45
GSMUA_Achr10P... Banana cytosol 46.35 58.67
VIT_01s0026g01670.t01 Wine grape endoplasmic reticulum, extracellular, vacuole 58.68 58.01
VIT_17s0000g05740.t01 Wine grape extracellular 56.39 57.58
KRH63402 Soybean extracellular 56.85 57.24
PGSC0003DMT400046723 Potato endoplasmic reticulum, golgi, vacuole 56.39 56.78
Solyc03g113150.2.1 Tomato endoplasmic reticulum, golgi, vacuole 56.16 56.55
PGSC0003DMT400083135 Potato extracellular 56.16 56.55
Solyc06g071020.2.1 Tomato extracellular 55.94 56.32
KRH54508 Soybean extracellular 42.69 56.16
KRH45851 Soybean extracellular 57.31 55.65
KRH74782 Soybean extracellular 56.16 54.91
Zm00001d046389_P007 Maize endoplasmic reticulum, extracellular 54.11 54.73
KRH69345 Soybean extracellular 55.71 54.59
Solyc01g010740.2.1 Tomato endoplasmic reticulum, extracellular 54.11 53.99
VIT_01s0026g01680.t01 Wine grape endoplasmic reticulum, extracellular 54.57 53.95
CDY39314 Canola extracellular 56.39 53.81
Bra026221.1-P Field mustard endoplasmic reticulum 56.16 53.71
PGSC0003DMT400003310 Potato extracellular 54.34 53.36
PGSC0003DMT400002241 Potato extracellular 53.42 53.3
CDY68729 Canola endoplasmic reticulum, extracellular, plasma membrane 55.71 53.28
Solyc02g087670.2.1 Tomato extracellular 53.88 52.91
CDX96854 Canola endoplasmic reticulum, extracellular, plasma membrane 55.25 52.84
PGSC0003DMT400017863 Potato extracellular 53.2 52.71
Bra016700.1-P Field mustard endoplasmic reticulum, extracellular, plasma membrane 55.02 52.62
AT1G14420.1 Thale cress endoplasmic reticulum 55.02 52.51
Bra026832.1-P Field mustard extracellular 54.11 52.43
KRH01130 Soybean extracellular 52.51 52.27
PGSC0003DMT400014086 Potato extracellular 53.2 52.13
Solyc03g058890.2.1 Tomato extracellular 53.2 51.89
PGSC0003DMT400017862 Potato endoplasmic reticulum, extracellular 46.58 51.39
CDY45202 Canola extracellular 53.42 50.98
KRH18498 Soybean endoplasmic reticulum, extracellular, vacuole 51.37 50.79
Bra024811.1-P Field mustard extracellular 53.2 50.76
Bra017412.1-P Field mustard extracellular 53.2 50.76
CDY04133 Canola extracellular 53.2 50.76
Bra026583.1-P Field mustard endoplasmic reticulum, plasma membrane 52.74 50.55
CDY17432 Canola extracellular 52.97 50.54
AT2G02720.1 Thale cress extracellular, vacuole 52.28 50.33
CDY03043 Canola extracellular 52.74 50.33
Zm00001d036945_P001 Maize endoplasmic reticulum 48.17 50.24
AT5G15110.1 Thale cress endoplasmic reticulum, extracellular 53.88 50.0
Zm00001d025067_P001 Maize mitochondrion 51.83 50.0
KRG93502 Soybean extracellular 50.46 49.89
Zm00001d004448_P001 Maize endoplasmic reticulum 50.91 49.78
PGSC0003DMT400014085 Potato extracellular, golgi 45.21 49.75
CDX70590 Canola endoplasmic reticulum, extracellular 53.88 49.68
Bra006279.1-P Field mustard endoplasmic reticulum, extracellular 53.65 49.47
CDX78607 Canola endoplasmic reticulum, extracellular 53.65 49.47
Solyc03g058910.2.1 Tomato extracellular, golgi 44.75 49.25
PGSC0003DMT400045436 Potato extracellular 51.37 49.02
Solyc05g007080.2.1 Tomato extracellular 50.91 48.9
CDY63769 Canola extracellular 52.97 48.43
CDX85564 Canola extracellular 52.28 48.41
CDX91953 Canola endoplasmic reticulum, extracellular 52.05 48.41
CDX74293 Canola endoplasmic reticulum, extracellular 52.05 48.41
CDY28691 Canola endoplasmic reticulum, extracellular, vacuole 51.83 48.4
Bra001011.1-P Field mustard endoplasmic reticulum, extracellular 51.83 48.2
AT3G01270.1 Thale cress endoplasmic reticulum, extracellular 52.05 48.0
Bra008721.1-P Field mustard endoplasmic reticulum, extracellular 54.57 47.9
CDX69550 Canola endoplasmic reticulum, extracellular 54.57 47.9
CDY66593 Canola endoplasmic reticulum, extracellular 54.57 47.9
Bra023504.1-P Field mustard extracellular 52.51 47.82
CDX81636 Canola endoplasmic reticulum 52.74 47.73
CDY53552 Canola extracellular 53.88 47.68
Zm00001d032806_P001 Maize cytosol, plastid 43.61 44.21
GSMUA_Achr7P08840_001 Banana nucleus 58.68 38.36
Solyc02g067450.2.1 Tomato extracellular 50.91 36.2
CDY04136 Canola mitochondrion, nucleus 0.46 1.32
Protein Annotations
KEGG:00040+4.2.2.2EntrezGene:107275230Gene3D:2.160.20.10MapMan:21.3.5.2ProteinID:AAA16476.1InterPro:AmbAllergen
GO:GO:0003674GO:GO:0003824GO:GO:0005488GO:GO:0005975GO:GO:0008150GO:GO:0008152
GO:GO:0009056GO:GO:0009987GO:GO:0016829GO:GO:0030570GO:GO:0045490GO:GO:0046872
InterPro:IPR012334PFAM:PF00544PFAM:PF04431PRINTS:PR00807PANTHER:PTHR31683PANTHER:PTHR31683:SF60
InterPro:Pec_lyaseInterPro:Pec_lyase_NInterPro:Pectin_lyas_foldInterPro:Pectin_lyase_fold/virulenceUniProt:Q43862SMART:SM00656
SUPFAM:SSF51126SignalP:SignalP-noTMTMHMM:TMhelixUniParc:UPI00000A144BEnsemblPlantsGene:Zm00001d000216EnsemblPlants:Zm00001d000216_P001
EnsemblPlants:Zm00001d000216_T001SEG:seg::::
Description
male gametophyte specific3 male gametophyte specific3
Coordinates
chrB73V4_ctg129:-:204285..205601
Molecular Weight (calculated)
49141.4 Da
IEP (calculated)
9.420
GRAVY (calculated)
-0.353
Length
438 amino acids
Sequence
(BLAST)
001: MAAVIRSRRR VSVFFYVVLA AAAAAAAAQA SNNVTSDEEY WAERAEVARS RNLAAYVSDP VAATNRFNAD VLRATTRRAL ARYDGPCMAT NPIDRCWRCR
101: ADWATDRKRL AQCARGFGHR TVGGAAGKLY VVRDPSDDEM IIPRKGTLRH AVIQDRPLWI VFARDMVIEL RQELIVNHNK TIDGRGAQVH IMFAQITLQN
201: VQNVILHNLH IHDSKAHSGG MIRDSKRHYG LRTRSDGDGV SVLSSSNVWI DHVSMSSCSD GLIDVVNGST AITVSNSHFT DHDHVMLFGA SNDSPQDAVM
301: QVTVAFNHFG RGLVQRMPRC RYGFFHVVNN DYTHWIMYAI GGNMNPTIIS QGNRFIAPDD PNAKEVTKRE YTPYKDYKEW VWKSQGDVMM NGAFFNESGG
401: QNERKYDRFD FIPAKHGRYV GQLTRFAGPL KCIVGQPC
Best Arabidopsis Sequence Match ( AT1G14420.1 )
(BLAST)
001: MAAAFLNLGG YVFVFFSSFL AIVAPQVRGN VAVFDSYWTQ RQSDALKQTI GSYDPHPLNV TNHFNYHVNI AVDASESRND TRRELTQVRS GRKTHKSSGK
101: CLAYNPIDNC WRCDRNWANN RKKLADCVLG FGRRTTGGKD GPIYVVKDAS DNDLINPKPG TLRHAVTRDG PLWIIFARSM IIKLQQELMI TSDKTIDGRG
201: ARVYIMEGAG LTLQFVNNVI IHNIYVKHIV PGNGGLIRDS EAHIGLRTKS DGDGISLFGA TNIWIDHVSM TRCADGMIDA IDGSTAVTIS NSHFTDHQEV
301: MLFGARDEHV IDKKMQITVA FNHFGKRLEQ RMPRCRYGTI HVVNNDYTHW EMYAIGGNMN PTIISQGNRF IAPPNEEAKQ ITKREYTPYG EWKSWNWQSE
401: GDYFLNGAYF VQSGKANAWS SKPKTPLPNK FTIRPKPGTM VRKLTMDAGV LGCKLGEAC
Arabidopsis Description
AT59Probable pectate lyase 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9M9S2]
SUBAcon: [endoplasmic reticulum]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.