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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum, extracellular, plasma membrane

Predictor Summary:
  • extracellular 6
  • endoplasmic reticulum 6
  • vacuole 5
  • plasma membrane 6
  • golgi 5
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum, extracellular, plasma membrane
Any Predictor:secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:endoplasmic reticulum
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:extracellular
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX96854 Canola endoplasmic reticulum, extracellular, plasma membrane 98.69 98.69
Bra016700.1-P Field mustard endoplasmic reticulum, extracellular, plasma membrane 97.82 97.82
CDY45254 Canola endoplasmic reticulum 85.37 85.37
CDY39314 Canola extracellular 84.93 84.75
AT1G14420.1 Thale cress endoplasmic reticulum 83.41 83.22
CDX81636 Canola endoplasmic reticulum 82.75 78.31
CDY53552 Canola extracellular 83.84 77.58
CDY04133 Canola extracellular 74.02 73.86
CDY17432 Canola extracellular 74.02 73.86
CDY03043 Canola extracellular 73.58 73.42
CDY45202 Canola extracellular 73.58 73.42
CDY09356 Canola extracellular 71.62 71.77
CDY41679 Canola endoplasmic reticulum, plasma membrane 71.4 71.55
TraesCS4A01G385700.1 Wheat cytosol 28.6 59.82
VIT_14s0108g00030.t01 Wine grape endoplasmic reticulum, extracellular, vacuole 56.55 59.0
KRH45851 Soybean extracellular 57.86 58.76
VIT_01s0026g01670.t01 Wine grape endoplasmic reticulum, extracellular, vacuole 56.55 58.47
KRH74782 Soybean extracellular 56.99 58.26
GSMUA_Achr2P16830_001 Banana endoplasmic reticulum, extracellular 54.37 56.85
KRH69345 Soybean extracellular 55.46 56.82
GSMUA_Achr6P00830_001 Banana endoplasmic reticulum, extracellular 54.15 56.75
GSMUA_Achr10P... Banana cytosol 42.79 56.65
GSMUA_Achr10P... Banana extracellular 48.03 56.41
Zm00001d000216_P001 Maize golgi, vacuole 53.28 55.71
Solyc03g058890.2.1 Tomato extracellular 54.59 55.68
PGSC0003DMT400017863 Potato extracellular 53.71 55.66
VIT_01s0026g01680.t01 Wine grape endoplasmic reticulum, extracellular 53.49 55.3
PGSC0003DMT400014086 Potato extracellular 53.93 55.26
Zm00001d046389_P007 Maize endoplasmic reticulum, extracellular 51.97 54.97
PGSC0003DMT400003310 Potato extracellular 53.28 54.71
Solyc02g087670.2.1 Tomato extracellular 53.06 54.48
EER88571 Sorghum endoplasmic reticulum, plasma membrane 53.71 54.19
OQU75805 Sorghum mitochondrion 52.18 54.07
TraesCS7A01G086600.1 Wheat endoplasmic reticulum, extracellular 52.84 54.02
Os06t0144200-01 Rice extracellular, plasma membrane 52.84 53.78
EES06507 Sorghum golgi, vacuole 52.18 53.71
PGSC0003DMT400017862 Potato endoplasmic reticulum, extracellular 46.51 53.65
CDY18330 Canola cytosol 17.03 53.42
Os06t0583900-01 Rice plasma membrane 51.97 53.12
HORVU6Hr1G038630.1 Barley extracellular 46.94 53.09
Os02t0214400-01 Rice plasma membrane 51.53 52.91
TraesCS7D01G356700.1 Wheat extracellular 51.09 52.7
PGSC0003DMT400014085 Potato extracellular, golgi 45.63 52.51
Solyc03g058910.2.1 Tomato extracellular, golgi 45.63 52.51
TraesCS7B01G261700.1 Wheat endoplasmic reticulum, extracellular, vacuole 50.87 52.48
TraesCS7A01G365700.1 Wheat endoplasmic reticulum, extracellular, vacuole 50.66 52.25
CDX74293 Canola endoplasmic reticulum, extracellular 53.71 52.23
CDX91953 Canola endoplasmic reticulum, extracellular 53.71 52.23
CDY01846 Canola endoplasmic reticulum, extracellular, vacuole 46.29 52.22
CDY12666 Canola extracellular 46.29 52.22
CDY32557 Canola extracellular 46.29 52.22
CDY56220 Canola endoplasmic reticulum, extracellular, vacuole 46.29 52.22
CDY28691 Canola endoplasmic reticulum, extracellular, vacuole 53.28 52.03
CDY00156 Canola extracellular, plastid 46.72 51.94
HORVU7Hr1G085860.1 Barley endoplasmic reticulum, extracellular, vacuole 50.0 51.58
CDY20049 Canola plastid, vacuole 46.29 51.46
CDX70590 Canola endoplasmic reticulum, extracellular 53.28 51.37
CDY28857 Canola extracellular 45.63 51.35
TraesCS6B01G211900.1 Wheat extracellular, golgi, vacuole 47.6 51.29
CDX78607 Canola endoplasmic reticulum, extracellular 53.06 51.16
CDY56520 Canola extracellular 45.41 51.11
TraesCS6D01G170500.1 Wheat golgi 47.38 51.06
CDY70583 Canola cytosol 27.07 51.03
CDY08948 Canola endoplasmic reticulum, extracellular 45.2 50.99
CDY24847 Canola endoplasmic reticulum, extracellular 45.2 50.99
CDY34310 Canola endoplasmic reticulum, vacuole 45.2 50.99
EER87830 Sorghum endoplasmic reticulum, extracellular, vacuole 51.53 50.75
CDY03419 Canola endoplasmic reticulum, extracellular 44.98 50.74
CDY41506 Canola endoplasmic reticulum, extracellular, vacuole 45.63 50.61
Zm00001d036158_P001 Maize endoplasmic reticulum, extracellular, vacuole 50.0 50.55
CDX85564 Canola extracellular 52.18 50.53
CDY63769 Canola extracellular 52.84 50.52
CDX92652 Canola endoplasmic reticulum, extracellular 44.76 50.49
CDX83690 Canola endoplasmic reticulum, extracellular, vacuole 45.41 50.49
CDY03964 Canola extracellular 45.41 50.49
CDY56668 Canola extracellular 46.07 50.48
Zm00001d036945_P001 Maize endoplasmic reticulum 46.29 50.48
CDY11033 Canola endoplasmic reticulum, extracellular 44.54 50.25
CDY19932 Canola extracellular 45.85 50.24
CDY05655 Canola extracellular 45.63 50.12
CDY33938 Canola extracellular 45.63 50.12
Os06t0144900-01 Rice mitochondrion 51.31 49.68
CDY05305 Canola endoplasmic reticulum, extracellular, vacuole 44.98 49.52
CDY24654 Canola endoplasmic reticulum, extracellular, vacuole 44.98 49.52
CDX86615 Canola endoplasmic reticulum, extracellular, golgi 46.51 49.42
CDY47327 Canola endoplasmic reticulum, extracellular 46.51 49.19
CDX89799 Canola extracellular 46.29 49.19
CDY15517 Canola endoplasmic reticulum, extracellular, golgi 46.29 49.19
CDY48132 Canola endoplasmic reticulum, golgi 45.85 49.07
CDY61137 Canola extracellular 46.07 48.96
CDY16732 Canola endoplasmic reticulum, golgi 45.63 48.83
CDY34149 Canola extracellular 38.21 48.75
CDY20748 Canola extracellular 41.27 48.71
CDY06557 Canola extracellular 41.05 48.58
CDX69550 Canola endoplasmic reticulum, extracellular 52.84 48.5
CDY66593 Canola endoplasmic reticulum, extracellular 52.84 48.5
CDX98092 Canola extracellular 37.55 48.31
CDY30040 Canola extracellular 37.55 48.31
CDY46471 Canola endoplasmic reticulum, extracellular 46.29 48.29
CDY01119 Canola endoplasmic reticulum, extracellular 45.85 48.28
CDY01151 Canola endoplasmic reticulum, extracellular, vacuole 47.16 47.79
CDY53564 Canola endoplasmic reticulum, extracellular, vacuole 46.94 47.25
TraesCS6A01G184500.2 Wheat extracellular, golgi, vacuole 47.6 47.08
CDX82902 Canola endoplasmic reticulum, extracellular, vacuole 33.41 46.79
CDX98091 Canola extracellular 37.77 46.63
HORVU7Hr1G019500.1 Barley mitochondrion 52.4 46.15
CDY30041 Canola extracellular 37.34 46.09
CDY65626 Canola golgi 45.41 45.81
CDY18738 Canola endoplasmic reticulum, extracellular 47.16 45.38
CDY66697 Canola endoplasmic reticulum, golgi 44.1 45.19
CDX79122 Canola extracellular 39.08 44.64
CDY27438 Canola extracellular 39.3 44.12
CDX77470 Canola golgi, plasma membrane 44.1 44.01
CDX76388 Canola extracellular 38.86 43.63
CDX70244 Canola vacuole 41.48 43.08
CDX78152 Canola extracellular 44.76 43.07
CDX77400 Canola endoplasmic reticulum, extracellular 46.07 42.89
CDX73573 Canola extracellular 44.54 42.86
CDY07515 Canola endoplasmic reticulum, extracellular, vacuole 45.41 42.28
CDX67615 Canola endoplasmic reticulum, extracellular, vacuole 45.2 42.16
CDY56964 Canola endoplasmic reticulum, extracellular, vacuole 44.98 41.87
CDX67560 Canola plasma membrane 44.76 41.84
CDX73426 Canola endoplasmic reticulum, extracellular, vacuole 44.32 39.27
CDY11284 Canola extracellular, golgi 42.58 38.24
CDY13312 Canola plasma membrane 44.32 37.87
CDY58428 Canola endoplasmic reticulum, golgi, plastid 42.58 37.86
GSMUA_Achr7P08840_001 Banana nucleus 55.24 37.76
Solyc02g067450.2.1 Tomato extracellular 50.44 37.5
CDY41382 Canola endoplasmic reticulum, golgi 42.79 37.19
CDY70492 Canola endoplasmic reticulum, extracellular 1.09 9.09
CDX81635 Canola mitochondrion, nucleus 0.44 1.32
CDX96858 Canola mitochondrion, nucleus 0.44 1.32
CDY04136 Canola mitochondrion, nucleus 0.44 1.32
CDY09355 Canola mitochondrion, nucleus 0.44 1.32
CDY41678 Canola mitochondrion, nucleus 0.44 1.32
CDY45199 Canola mitochondrion, nucleus 0.44 1.32
CDY45253 Canola mitochondrion, nucleus 0.44 1.32
CDY53553 Canola mitochondrion, nucleus 0.44 1.32
CDY66531 Canola mitochondrion, nucleus 0.44 1.32
Protein Annotations
KEGG:00040+4.2.2.2Gene3D:2.160.20.10MapMan:21.3.5.2GO:A0A078JPK5UniProt:A0A078JPK5InterPro:AmbAllergen
EnsemblPlants:CDY68729ProteinID:CDY68729ProteinID:CDY68729.1GO:GO:0003674GO:GO:0003824GO:GO:0005488
GO:GO:0005975GO:GO:0008150GO:GO:0008152GO:GO:0009056GO:GO:0009987GO:GO:0016829
GO:GO:0030570GO:GO:0045490GO:GO:0046872EnsemblPlantsGene:GSBRNA2T00077121001InterPro:IPR012334PFAM:PF00544
PFAM:PF04431PRINTS:PR00807PANTHER:PTHR31683PANTHER:PTHR31683:SF14InterPro:Pec_lyaseInterPro:Pec_lyase_N
InterPro:Pectin_lyas_foldInterPro:Pectin_lyase_fold/virulenceSMART:SM00656SUPFAM:SSF51126SignalP:SignalP-noTMTMHMM:TMhelix
UniPathway:UPA00545UniParc:UPI0004EE2D2FSEG:seg:::
Description
BnaCnng60280DPectate lyase [Source:UniProtKB/TrEMBL;Acc:A0A078JPK5]
Coordinates
chrLK037856:-:106..2259
Molecular Weight (calculated)
51149.4 Da
IEP (calculated)
9.268
GRAVY (calculated)
-0.285
Length
458 amino acids
Sequence
(BLAST)
001: MTAAFLNIGG YLFVFSLLLL ATLTPHVGAN VAVFDNYWLQ RQGDALKQTI ASFDPNPLNV TDHLNYHVAL AVGATESINS TRRELSQVRN GRKLKRSGKC
101: VAYNPIDRCW RCHGDWEKNR KKLADCVLGF GRRTTGGKDG PIYVVNDASD DDLINPKPGT LRHAVTRDGP LWIIFGSSMI INLQQELIIT SDKTIDGRGA
201: RVYIMEGAGL TLQFVNNVII HNIYIKHVVP KSGGLIRDSE QHIGLRTVSD GDGISLFGAT NVWIDHVSMT RCSDGMIDAI LGSTAITISN SHFTDHEEVM
301: LFGANDKHVI DKKMQITVAF NHFGKRLDQR MPRCRFGTIH VVNNDYTHWE MYAIGGNMNP TIISQGNRFI APPNEQAKQI TKREYTPYVD WKMWNWQSEG
401: DYFLNGAYFV QSGKQNAWSP KPVNPVPRKF AIRPQPGTMV RKLTMDAGAL GCKPGTPC
Best Arabidopsis Sequence Match ( AT1G14420.1 )
(BLAST)
001: MAAAFLNLGG YVFVFFSSFL AIVAPQVRGN VAVFDSYWTQ RQSDALKQTI GSYDPHPLNV TNHFNYHVNI AVDASESRND TRRELTQVRS GRKTHKSSGK
101: CLAYNPIDNC WRCDRNWANN RKKLADCVLG FGRRTTGGKD GPIYVVKDAS DNDLINPKPG TLRHAVTRDG PLWIIFARSM IIKLQQELMI TSDKTIDGRG
201: ARVYIMEGAG LTLQFVNNVI IHNIYVKHIV PGNGGLIRDS EAHIGLRTKS DGDGISLFGA TNIWIDHVSM TRCADGMIDA IDGSTAVTIS NSHFTDHQEV
301: MLFGARDEHV IDKKMQITVA FNHFGKRLEQ RMPRCRYGTI HVVNNDYTHW EMYAIGGNMN PTIISQGNRF IAPPNEEAKQ ITKREYTPYG EWKSWNWQSE
401: GDYFLNGAYF VQSGKANAWS SKPKTPLPNK FTIRPKPGTM VRKLTMDAGV LGCKLGEAC
Arabidopsis Description
AT59Probable pectate lyase 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9M9S2]
SUBAcon: [endoplasmic reticulum]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.