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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular

Predictor Summary:
  • extracellular 7
  • endoplasmic reticulum 5
  • vacuole 5
  • plasma membrane 6
  • golgi 5
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:extracellular
Any Predictor:plastid, secretory
BaCelLo:secretory
ChloroP:plastid
iPSORT:secretory
MultiLoc:plasma membrane
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:extracellular
YLoc:extracellular
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra035588.1-P Field mustard extracellular 99.23 99.23
CDY06557 Canola extracellular 98.71 98.97
AT5G55720.1 Thale cress endoplasmic reticulum, extracellular 85.57 84.69
CDY18330 Canola cytosol 23.2 61.64
VIT_19s0015g00510.t01 Wine grape endoplasmic reticulum, extracellular, vacuole 62.63 60.45
CDY24847 Canola endoplasmic reticulum, extracellular 56.96 54.43
CDY34310 Canola endoplasmic reticulum, vacuole 56.44 53.94
CDY08948 Canola endoplasmic reticulum, extracellular 56.44 53.94
CDY12666 Canola extracellular 56.19 53.69
CDY03419 Canola endoplasmic reticulum, extracellular 56.19 53.69
CDY11033 Canola endoplasmic reticulum, extracellular 55.93 53.45
CDY32557 Canola extracellular 55.93 53.45
CDY41506 Canola endoplasmic reticulum, extracellular, vacuole 56.44 53.03
CDX92652 Canola endoplasmic reticulum, extracellular 55.41 52.96
CDY28857 Canola extracellular 55.41 52.83
CDY56520 Canola extracellular 55.41 52.83
CDY56220 Canola endoplasmic reticulum, extracellular, vacuole 54.64 52.22
CDY01846 Canola endoplasmic reticulum, extracellular, vacuole 54.64 52.22
CDY16732 Canola endoplasmic reticulum, golgi 57.22 51.87
CDY48132 Canola endoplasmic reticulum, golgi 56.96 51.64
CDY70583 Canola cytosol 32.22 51.44
CDY19932 Canola extracellular 55.41 51.44
CDY20049 Canola plastid, vacuole 54.38 51.21
CDY00156 Canola extracellular, plastid 54.38 51.21
CDY56668 Canola extracellular 55.15 51.2
CDX83690 Canola endoplasmic reticulum, extracellular, vacuole 54.12 50.97
CDY05305 Canola endoplasmic reticulum, extracellular, vacuole 54.38 50.72
CDY03964 Canola extracellular 53.61 50.49
CDY24654 Canola endoplasmic reticulum, extracellular, vacuole 54.12 50.48
CDY33938 Canola extracellular 54.12 50.36
CDY05655 Canola extracellular 54.12 50.36
CDX98092 Canola extracellular 45.88 50.0
CDY30040 Canola extracellular 45.62 49.72
CDX82902 Canola endoplasmic reticulum, extracellular, vacuole 41.75 49.54
CDY47327 Canola endoplasmic reticulum, extracellular 55.15 49.42
CDY15517 Canola endoplasmic reticulum, extracellular, golgi 54.38 48.96
CDX86615 Canola endoplasmic reticulum, extracellular, golgi 54.38 48.96
CDY46471 Canola endoplasmic reticulum, extracellular 55.15 48.75
CDY34149 Canola extracellular 45.1 48.75
CDY01119 Canola endoplasmic reticulum, extracellular 54.64 48.74
CDX89799 Canola extracellular 53.61 48.26
CDY30041 Canola extracellular 46.13 48.25
CDX98091 Canola extracellular 46.13 48.25
CDY65626 Canola golgi 56.44 48.24
CDY61137 Canola extracellular 53.35 48.03
CDY01151 Canola endoplasmic reticulum, extracellular, vacuole 55.67 47.79
CDY53564 Canola endoplasmic reticulum, extracellular, vacuole 55.67 47.47
CDX79122 Canola extracellular 46.65 45.14
CDY66697 Canola endoplasmic reticulum, golgi 51.55 44.74
CDX70244 Canola vacuole 50.77 44.67
CDX76388 Canola extracellular 46.65 44.36
CDY18738 Canola endoplasmic reticulum, extracellular 53.61 43.7
CDY27438 Canola extracellular 45.88 43.63
CDX77470 Canola golgi, plasma membrane 51.55 43.57
CDX77400 Canola endoplasmic reticulum, extracellular 54.9 43.29
CDX78152 Canola extracellular 52.06 42.44
CDX73573 Canola extracellular 51.55 42.02
CDY68729 Canola endoplasmic reticulum, extracellular, plasma membrane 48.71 41.27
CDX96854 Canola endoplasmic reticulum, extracellular, plasma membrane 48.71 41.27
CDX67560 Canola plasma membrane 51.8 41.02
CDY45254 Canola endoplasmic reticulum 47.68 40.39
CDY39314 Canola extracellular 47.42 40.09
CDY07515 Canola endoplasmic reticulum, extracellular, vacuole 50.52 39.84
CDY04133 Canola extracellular 46.91 39.65
CDX67615 Canola endoplasmic reticulum, extracellular, vacuole 50.0 39.51
CDY45202 Canola extracellular 46.65 39.43
CDY17432 Canola extracellular 46.65 39.43
CDY03043 Canola extracellular 46.65 39.43
CDY56964 Canola endoplasmic reticulum, extracellular, vacuole 49.48 39.02
CDY11284 Canola extracellular, golgi 51.29 39.02
CDY41679 Canola endoplasmic reticulum, plasma membrane 45.1 38.29
CDY09356 Canola extracellular 45.1 38.29
CDX81636 Canola endoplasmic reticulum 47.68 38.22
CDY58428 Canola endoplasmic reticulum, golgi, plastid 50.52 38.06
CDY13312 Canola plasma membrane 52.06 37.69
CDY53552 Canola extracellular 47.94 37.58
CDX73426 Canola endoplasmic reticulum, extracellular, vacuole 50.0 37.52
CDY28691 Canola endoplasmic reticulum, extracellular, vacuole 45.1 37.31
CDY41382 Canola endoplasmic reticulum, golgi 50.52 37.19
CDX74293 Canola endoplasmic reticulum, extracellular 44.85 36.94
CDX91953 Canola endoplasmic reticulum, extracellular 44.85 36.94
CDX70590 Canola endoplasmic reticulum, extracellular 43.81 35.79
CDX78607 Canola endoplasmic reticulum, extracellular 43.81 35.79
CDX85564 Canola extracellular 43.56 35.73
CDY63769 Canola extracellular 43.04 34.86
CDY66593 Canola endoplasmic reticulum, extracellular 44.59 34.67
CDX69550 Canola endoplasmic reticulum, extracellular 44.33 34.47
CDY70492 Canola endoplasmic reticulum, extracellular 0.77 5.45
CDX96858 Canola mitochondrion, nucleus 0.26 0.66
CDY53553 Canola mitochondrion, nucleus 0.26 0.66
CDY04136 Canola mitochondrion, nucleus 0.26 0.66
CDX81635 Canola mitochondrion, nucleus 0.26 0.66
CDY66531 Canola mitochondrion, nucleus 0.26 0.66
CDY09355 Canola mitochondrion, nucleus 0.26 0.66
CDY45253 Canola mitochondrion, nucleus 0.26 0.66
CDY45199 Canola mitochondrion, nucleus 0.26 0.66
CDY41678 Canola mitochondrion, nucleus 0.26 0.66
Protein Annotations
KEGG:00040+4.2.2.2Gene3D:2.160.20.10MapMan:21.3.5.2GO:A0A078G7X6UniProt:A0A078G7X6InterPro:AmbAllergen
EnsemblPlants:CDY20748ProteinID:CDY20748ProteinID:CDY20748.1GO:GO:0003674GO:GO:0003824GO:GO:0005488
GO:GO:0005975GO:GO:0008150GO:GO:0008152GO:GO:0009056GO:GO:0009987GO:GO:0016829
GO:GO:0030570GO:GO:0045490GO:GO:0046872EnsemblPlantsGene:GSBRNA2T00012972001InterPro:IPR012334PFAM:PF00544
PRINTS:PR00807PANTHER:PTHR31683PANTHER:PTHR31683:SF33InterPro:Pec_lyaseInterPro:Pectin_lyas_foldInterPro:Pectin_lyase_fold/virulence
SMART:SM00656SUPFAM:SSF51126SignalP:SignalP-noTMUniPathway:UPA00545UniParc:UPI0004EEA1F6SEG:seg
Description
BnaA02g08880DPectate lyase [Source:UniProtKB/TrEMBL;Acc:A0A078G7X6]
Coordinates
chrLK032111:-:446562..448180
Molecular Weight (calculated)
42968.3 Da
IEP (calculated)
4.893
GRAVY (calculated)
-0.308
Length
388 amino acids
Sequence
(BLAST)
001: MSIVCTIFLF LLTASSAFAS AFPKPAPVTH WSTSETSNST TASCSATGNP IDDCWRCDKK WKSNRKSLAD CAVGFGRDSV GGRAGDFYTV TDSGDEDPLN
101: PSPGTLRYAA TQDQPLWIIF DRDMVITLKE DIQVTSYKTI DGRGNNVQIA YGPCLALYQV SNVIIHNIYI HHCVPAKRSL GGYSDGDGIS IFESRDVWID
201: HCTLEKCHDG LIDAVGGSTD ITISNNYMLN HNEVMLLGHS DEFVGDRDMR VSIAFNYFGE GLVQRMPRCR HGFFHIVNNI YREWEMYAIG GSANPTIFSQ
301: GNVFIASDNQ FTKEVTKRES VDGDDEWKEW NWKSEGDEML NGAFFTPSGN EDSPSYTKMS SMVARPASLL KTTHPSVGVL SCQIDQPC
Best Arabidopsis Sequence Match ( AT5G55720.1 )
(BLAST)
001: MSIVCTFFLF LLNTSFAFAF AIPKPPIVRR LSTTVTSNST ASSCSANGNP IDECWRCDEN WKDNRKNLAD CAVGFGRDSI GGRAGEFYTV TDSGDDNPLN
101: PTPGTLRYAA TQDQPLWIIF DRDMVIQLKQ DLQVASYKTI DGRGNNVQIA YGPCLTLYKV SNIIINNLYI HDCVPVKRNA LSSLGGYSDG DGISIFESRD
201: IWIDHCTLEK CYDGLIDAVN GSTDITISNS YMLNHNEVML LGHSDEYSGD RDMRVTIAFN YFGEGLVQRM PRCRHGYFHI VNNIYRDWKM YAIGGSANPT
301: IFSQGNVFIA SNNQFTKEVT KRESADGDEE WKEWNWKSEG DEMVNGAFFT PSGKEDSPSY AKFSSMVARP ASLLKTTHPS VGVLSCEIDQ AC
Arabidopsis Description
Putative pectate lyase 21 [Source:UniProtKB/Swiss-Prot;Acc:Q9FM66]
SUBAcon: [endoplasmic reticulum,extracellular]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.