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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular, endoplasmic reticulum

Predictor Summary:
  • nucleus 1
  • extracellular 5
  • golgi 4
  • plasma membrane 4
  • endoplasmic reticulum 5
  • vacuole 4
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum, extracellular
Any Predictor:nucleus, secretory
BaCelLo:nucleus
iPSORT:secretory
MultiLoc:endoplasmic reticulum
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:cytosol
YLoc:extracellular
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra008721.1-P Field mustard endoplasmic reticulum, extracellular 98.4 98.4
CDX69550 Canola endoplasmic reticulum, extracellular 98.4 98.4
AT5G15110.1 Thale cress endoplasmic reticulum, extracellular 83.97 88.77
CDX78607 Canola endoplasmic reticulum, extracellular 83.57 87.79
CDX70590 Canola endoplasmic reticulum, extracellular 82.77 86.95
CDX85564 Canola extracellular 81.16 85.62
CDY63769 Canola extracellular 80.96 84.34
CDY28691 Canola endoplasmic reticulum, extracellular, vacuole 73.15 77.83
CDX74293 Canola endoplasmic reticulum, extracellular 73.35 77.71
CDX91953 Canola endoplasmic reticulum, extracellular 73.35 77.71
VIT_14s0108g00030.t01 Wine grape endoplasmic reticulum, extracellular, vacuole 54.71 62.19
TraesCS4A01G385700.1 Wheat cytosol 27.25 62.1
VIT_01s0026g01670.t01 Wine grape endoplasmic reticulum, extracellular, vacuole 54.71 61.63
GSMUA_Achr10P... Banana cytosol 41.88 60.4
GSMUA_Achr6P00830_001 Banana endoplasmic reticulum, extracellular 52.3 59.73
VIT_01s0026g01680.t01 Wine grape endoplasmic reticulum, extracellular 52.91 59.59
GSMUA_Achr2P16830_001 Banana endoplasmic reticulum, extracellular 51.3 58.45
PGSC0003DMT400003310 Potato extracellular 51.7 57.85
Solyc02g087670.2.1 Tomato extracellular 51.5 57.62
KRH18498 Soybean endoplasmic reticulum, extracellular, vacuole 50.9 57.34
PGSC0003DMT400017863 Potato extracellular 50.7 57.24
GSMUA_Achr10P... Banana extracellular 44.69 57.18
PGSC0003DMT400014086 Potato extracellular 50.9 56.82
Solyc03g058890.2.1 Tomato extracellular 51.1 56.79
KRG93502 Soybean extracellular 49.9 56.21
HORVU6Hr1G038630.1 Barley extracellular 44.69 55.06
KRH01130 Soybean extracellular 48.5 55.0
OQU75805 Sorghum mitochondrion 48.7 54.98
PGSC0003DMT400017862 Potato endoplasmic reticulum, extracellular 43.69 54.91
TraesCS7A01G086600.1 Wheat endoplasmic reticulum, extracellular 49.3 54.91
Os06t0144200-01 Rice extracellular, plasma membrane 49.5 54.89
Zm00001d000216_P001 Maize golgi, vacuole 47.9 54.57
EER88571 Sorghum endoplasmic reticulum, plasma membrane 49.5 54.41
EES06507 Sorghum golgi, vacuole 48.5 54.38
Os02t0214400-01 Rice plasma membrane 48.5 54.26
CDY05655 Canola extracellular 45.29 54.2
CDY33938 Canola extracellular 45.29 54.2
CDY56668 Canola extracellular 45.29 54.07
CDY09356 Canola extracellular 49.5 54.05
CDY04133 Canola extracellular 49.7 54.03
CDY17432 Canola extracellular 49.7 54.03
CDY19932 Canola extracellular 45.09 53.83
CDY11033 Canola endoplasmic reticulum, extracellular 43.69 53.69
CDY12666 Canola extracellular 43.69 53.69
CDY32557 Canola extracellular 43.69 53.69
CDY41679 Canola endoplasmic reticulum, plasma membrane 49.1 53.61
CDY41506 Canola endoplasmic reticulum, extracellular, vacuole 44.29 53.51
CDY70583 Canola cytosol 26.05 53.5
CDY03419 Canola endoplasmic reticulum, extracellular 43.49 53.45
CDY34310 Canola endoplasmic reticulum, vacuole 43.49 53.45
CDY05305 Canola endoplasmic reticulum, extracellular, vacuole 44.49 53.37
CDY24654 Canola endoplasmic reticulum, extracellular, vacuole 44.49 53.37
Os06t0583900-01 Rice plasma membrane 47.9 53.35
CDY28857 Canola extracellular 43.49 53.32
CDY56520 Canola extracellular 43.49 53.32
CDX92652 Canola endoplasmic reticulum, extracellular 43.29 53.2
CDY08948 Canola endoplasmic reticulum, extracellular 43.09 52.96
Zm00001d046389_P007 Maize endoplasmic reticulum, extracellular 45.89 52.89
CDY45254 Canola endoplasmic reticulum 48.5 52.84
CDY68729 Canola endoplasmic reticulum, extracellular, plasma membrane 48.5 52.84
CDY18330 Canola cytosol 15.43 52.74
CDY03043 Canola extracellular 48.5 52.72
CDY45202 Canola extracellular 48.5 52.72
CDY01846 Canola endoplasmic reticulum, extracellular, vacuole 42.89 52.71
CDY24847 Canola endoplasmic reticulum, extracellular 42.89 52.71
CDY56220 Canola endoplasmic reticulum, extracellular, vacuole 42.89 52.71
CDY20049 Canola plastid, vacuole 43.49 52.67
EER87830 Sorghum endoplasmic reticulum, extracellular, vacuole 48.9 52.47
TraesCS6B01G211900.1 Wheat extracellular, golgi, vacuole 44.69 52.47
TraesCS6D01G170500.1 Wheat golgi 44.69 52.47
CDX96854 Canola endoplasmic reticulum, extracellular, plasma membrane 48.1 52.4
CDY39314 Canola extracellular 48.1 52.29
HORVU7Hr1G085860.1 Barley endoplasmic reticulum, extracellular, vacuole 46.49 52.25
Os06t0144900-01 Rice mitochondrion 49.5 52.22
CDX83690 Canola endoplasmic reticulum, extracellular, vacuole 43.09 52.18
CDY00156 Canola extracellular, plastid 43.09 52.18
TraesCS7A01G365700.1 Wheat endoplasmic reticulum, extracellular, vacuole 46.29 52.03
TraesCS7D01G356700.1 Wheat extracellular 46.29 52.03
Zm00001d036158_P001 Maize endoplasmic reticulum, extracellular, vacuole 47.09 51.88
CDX86615 Canola endoplasmic reticulum, extracellular, golgi 44.69 51.74
CDY15517 Canola endoplasmic reticulum, extracellular, golgi 44.69 51.74
TraesCS7B01G261700.1 Wheat endoplasmic reticulum, extracellular, vacuole 45.89 51.58
CDY03964 Canola extracellular 42.48 51.46
CDY61137 Canola extracellular 44.29 51.28
Solyc03g058910.2.1 Tomato extracellular, golgi 40.88 51.26
CDX89799 Canola extracellular 44.09 51.04
CDY01119 Canola endoplasmic reticulum, extracellular 44.49 51.03
PGSC0003DMT400014085 Potato extracellular, golgi 40.68 51.01
CDY48132 Canola endoplasmic reticulum, golgi 43.69 50.93
CDY47327 Canola endoplasmic reticulum, extracellular 44.09 50.81
CDY16732 Canola endoplasmic reticulum, golgi 43.49 50.7
CDY46471 Canola endoplasmic reticulum, extracellular 44.29 50.34
CDX98092 Canola extracellular 35.87 50.28
Zm00001d036945_P001 Maize endoplasmic reticulum 42.28 50.24
CDY01151 Canola endoplasmic reticulum, extracellular, vacuole 45.29 50.0
CDY30040 Canola extracellular 35.67 50.0
CDY53564 Canola endoplasmic reticulum, extracellular, vacuole 45.49 49.89
CDX81636 Canola endoplasmic reticulum 48.1 49.59
CDY34149 Canola extracellular 35.67 49.58
CDX82902 Canola endoplasmic reticulum, extracellular, vacuole 32.46 49.54
CDY53552 Canola extracellular 48.9 49.29
CDY66697 Canola endoplasmic reticulum, golgi 43.89 48.99
CDY65626 Canola golgi 44.49 48.9
CDX98091 Canola extracellular 36.07 48.52
TraesCS6A01G184500.2 Wheat extracellular, golgi, vacuole 44.89 48.38
HORVU7Hr1G019500.1 Barley mitochondrion 50.3 48.27
CDY30041 Canola extracellular 35.67 47.98
CDX77470 Canola golgi, plasma membrane 44.09 47.93
CDY18738 Canola endoplasmic reticulum, extracellular 45.49 47.69
CDX79122 Canola extracellular 37.07 46.13
CDX76388 Canola extracellular 36.67 44.85
CDY06557 Canola extracellular 34.67 44.7
CDY27438 Canola extracellular 36.47 44.61
CDY20748 Canola extracellular 34.67 44.59
CDX77400 Canola endoplasmic reticulum, extracellular 43.89 44.51
CDX70244 Canola vacuole 38.48 43.54
CDX73573 Canola extracellular 40.88 42.86
CDX78152 Canola extracellular 40.68 42.65
CDX67560 Canola plasma membrane 41.28 42.04
CDX67615 Canola endoplasmic reticulum, extracellular, vacuole 40.28 40.94
CDY07515 Canola endoplasmic reticulum, extracellular, vacuole 40.28 40.85
CDY56964 Canola endoplasmic reticulum, extracellular, vacuole 40.08 40.65
CDX73426 Canola endoplasmic reticulum, extracellular, vacuole 39.88 38.49
CDY11284 Canola extracellular, golgi 39.28 38.43
GSMUA_Achr7P08840_001 Banana nucleus 51.3 38.21
Solyc02g067450.2.1 Tomato extracellular 47.09 38.15
CDY13312 Canola plasma membrane 40.68 37.87
CDY58428 Canola endoplasmic reticulum, golgi, plastid 38.68 37.48
CDY41382 Canola endoplasmic reticulum, golgi 39.28 37.19
CDY70492 Canola endoplasmic reticulum, extracellular 1.0 9.09
CDX81635 Canola mitochondrion, nucleus 0.4 1.32
CDX96858 Canola mitochondrion, nucleus 0.4 1.32
CDY04136 Canola mitochondrion, nucleus 0.4 1.32
CDY09355 Canola mitochondrion, nucleus 0.4 1.32
CDY41678 Canola mitochondrion, nucleus 0.4 1.32
CDY45199 Canola mitochondrion, nucleus 0.4 1.32
CDY45253 Canola mitochondrion, nucleus 0.4 1.32
CDY53553 Canola mitochondrion, nucleus 0.4 1.32
CDY66531 Canola mitochondrion, nucleus 0.4 1.32
Protein Annotations
KEGG:00040+4.2.2.2Gene3D:2.160.20.10MapMan:21.3.5.2GO:A0A078JG45UniProt:A0A078JG45InterPro:AmbAllergen
EnsemblPlants:CDY66593ProteinID:CDY66593ProteinID:CDY66593.1GO:GO:0003674GO:GO:0003824GO:GO:0005488
GO:GO:0005975GO:GO:0008150GO:GO:0008152GO:GO:0009056GO:GO:0009987GO:GO:0016829
GO:GO:0030570GO:GO:0045490GO:GO:0046872EnsemblPlantsGene:GSBRNA2T00054617001InterPro:IPR012334PFAM:PF00544
PFAM:PF04431PRINTS:PR00807PANTHER:PTHR31683PANTHER:PTHR31683:SF7InterPro:Pec_lyaseInterPro:Pec_lyase_N
InterPro:Pectin_lyas_foldInterPro:Pectin_lyase_fold/virulenceSMART:SM00656SUPFAM:SSF51126SignalP:SignalP-noTMUniPathway:UPA00545
UniParc:UPI0004EEF37CSEG:seg::::
Description
BnaCnng51570DPectate lyase [Source:UniProtKB/TrEMBL;Acc:A0A078JG45]
Coordinates
chrLK035348:-:8397..10751
Molecular Weight (calculated)
56363.6 Da
IEP (calculated)
8.194
GRAVY (calculated)
-0.591
Length
499 amino acids
Sequence
(BLAST)
001: MEIARLLKLM CVFCIAGLIP TIRANISELD EYWSQRADEA REFTLQAYHS DPYEIVDHFH ERHYDNSTDD TTTEEHSSNS ADVTATAEDS SNSTDVTATE
101: EDSSTKPEEE RTEVIEMVGN SKNSTRRSLK GKGKGKWSKL KGPCTASNPI DKCWRCRSNW ANRRKKLAKC VRGFGHGTTG GKRGRIYVVT SNLDEDMVNP
201: IPGTLRHAVI QKEPLWIIFK NDMSIRLSQE LLVNSDKTID ARGADVHIAH GAGITMQFVR NVIIHGLHIH HISESNGGMI RDSVDHFGMR TRADGDGLSI
301: YGSSNIWIDH VSMSKCQDGL IDAIVGSTAI TISNSHFTHH NDVMLLGAQN NMNEADQKMQ VTVAYNHFGK GLVQRMPRIR WGFVHVVNND YTHWELYAIG
401: GSQGPTILSH GNRFIAPPHL PYYKEVTKRD YALEDEWKHW TWRSEKDIFM NGAFFRQSGD PHYKSAHTRK QMIKPKNGYA VSKLTKYAGA LDCRVGKRC
Best Arabidopsis Sequence Match ( AT5G15110.1 )
(BLAST)
001: MEMVRLSKLM FTFCIAVLIP TIRGNISELD EYWSQRADEA REFTLQAYHS DPYEIVDHFH ERHYDNSTDV TTPEEDGDAK PEEEEKEFIE MLGSSTNSTR
101: RSLRGKGKGK WSKLKGPCTA SNPIDKCWRC RSDWAKRRKK LTRCVRGFGH RTTGGKRGRI YVVTSNLDED MVNPKPGTLR HAVIQKEPLW IIFKNDMSIR
201: LNQELLINSH KTIDARGANV HVAHGAGITM QFVKNVVIHG LHIHHISESS GGMIRDSVDH FGMRTRADGD GLSIYGSSNI WLDHISMSKC QDGLIDAIVG
301: STGITISNSH FTHHNDVMLL GAQNTNEADK HMQVTVAYNH FGKGLVQRMP RIRWGFVHVV NNDYTHWELY AIGGSQGPTI LSHGNRFIAP PHKPHYREVT
401: KRDYASEDEW KHWNWRSDKD VFMNGAYFRQ SGNPQYKCAH TRQQMIKPKN GLAVSKLTKY AGALDCRVGR RC
Arabidopsis Description
Pectate lyase family protein [Source:TAIR;Acc:AT5G15110]
SUBAcon: [extracellular,endoplasmic reticulum]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.