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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • extracellular 6
  • endoplasmic reticulum 5
  • vacuole 5
  • plasma membrane 7
  • golgi 5
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:extracellular
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX67560 Canola plasma membrane 88.81 97.14
CDX78152 Canola extracellular 80.6 90.76
CDX73573 Canola extracellular 80.22 90.34
AT3G53190.1 Thale cress extracellular 81.16 90.06
KRH67761 Soybean endoplasmic reticulum, extracellular, vacuole 62.87 71.7
PGSC0003DMT400009869 Potato cytosol 54.29 68.31
VIT_08s0007g04820.t01 Wine grape plastid 62.31 68.3
KRH19954 Soybean endoplasmic reticulum, extracellular, plasma membrane 60.45 67.92
Solyc09g008380.2.1 Tomato nucleus 59.7 66.25
CDY18330 Canola cytosol 16.6 60.96
CDY03419 Canola endoplasmic reticulum, extracellular 44.59 58.87
CDY24847 Canola endoplasmic reticulum, extracellular 44.4 58.62
CDY34310 Canola endoplasmic reticulum, vacuole 44.4 58.62
CDY70583 Canola cytosol 26.49 58.44
CDY08948 Canola endoplasmic reticulum, extracellular 44.22 58.37
CDY41506 Canola endoplasmic reticulum, extracellular, vacuole 44.96 58.35
CDX92652 Canola endoplasmic reticulum, extracellular 44.03 58.13
CDY11033 Canola endoplasmic reticulum, extracellular 44.03 58.13
CDY05305 Canola endoplasmic reticulum, extracellular, vacuole 44.96 57.93
CDY24654 Canola endoplasmic reticulum, extracellular, vacuole 44.96 57.93
CDY28857 Canola extracellular 43.66 57.49
CDY56520 Canola extracellular 43.66 57.49
CDX86615 Canola endoplasmic reticulum, extracellular, golgi 46.08 57.31
CDY15517 Canola endoplasmic reticulum, extracellular, golgi 46.08 57.31
CDY01846 Canola endoplasmic reticulum, extracellular, vacuole 43.28 57.14
CDY33938 Canola extracellular 44.4 57.07
CDY12666 Canola extracellular 43.1 56.9
CDY56220 Canola endoplasmic reticulum, extracellular, vacuole 43.1 56.9
CDX89799 Canola extracellular 45.71 56.84
CDY05655 Canola extracellular 44.22 56.83
CDX67615 Canola endoplasmic reticulum, extracellular, vacuole 52.05 56.82
CDY07515 Canola endoplasmic reticulum, extracellular, vacuole 52.05 56.71
CDX70244 Canola vacuole 46.64 56.69
CDY32557 Canola extracellular 42.91 56.65
CDY61137 Canola extracellular 45.52 56.61
CDY16732 Canola endoplasmic reticulum, golgi 45.15 56.54
TraesCS1B01G161000.1 Wheat endoplasmic reticulum, extracellular, plasma membrane 50.19 56.51
CDY19932 Canola extracellular 44.03 56.46
CDY56668 Canola extracellular 44.03 56.46
CDY48132 Canola endoplasmic reticulum, golgi 44.96 56.31
TraesCS1D01G142400.1 Wheat endoplasmic reticulum, extracellular, plasma membrane 50.19 56.28
TraesCS1A01G143600.1 Wheat extracellular 50.37 56.25
CDX83690 Canola endoplasmic reticulum, extracellular, vacuole 43.1 56.07
CDY01119 Canola endoplasmic reticulum, extracellular 45.15 55.63
CDY47327 Canola endoplasmic reticulum, extracellular 44.78 55.43
KXG38421 Sorghum extracellular 49.63 55.19
CDY56964 Canola endoplasmic reticulum, extracellular, vacuole 50.37 54.88
CDY01151 Canola endoplasmic reticulum, extracellular, vacuole 46.27 54.87
CDY00156 Canola extracellular, plastid 42.16 54.85
CDY20049 Canola plastid, vacuole 42.16 54.85
Zm00001d032806_P001 Maize cytosol, plastid 44.03 54.63
GSMUA_Achr4P25120_001 Banana extracellular 45.52 54.59
CDY53564 Canola endoplasmic reticulum, extracellular, vacuole 46.08 54.29
CDY46471 Canola endoplasmic reticulum, extracellular 44.4 54.21
HORVU1Hr1G038220.7 Barley endoplasmic reticulum, extracellular 48.88 53.8
Os10t0457200-01 Rice plasma membrane 49.25 53.77
CDY03964 Canola extracellular 41.04 53.4
CDY65626 Canola golgi 44.78 52.86
CDX73426 Canola endoplasmic reticulum, extracellular, vacuole 50.75 52.61
CDY66697 Canola endoplasmic reticulum, golgi 43.84 52.57
CDY06557 Canola extracellular 37.87 52.45
CDY18738 Canola endoplasmic reticulum, extracellular 46.46 52.31
CDY20748 Canola extracellular 37.69 52.06
CDY34149 Canola extracellular 34.7 51.81
CDX77470 Canola golgi, plasma membrane 44.22 51.63
CDY11284 Canola extracellular, golgi 48.32 50.78
CDY30040 Canola extracellular 33.58 50.56
CDX98092 Canola extracellular 33.4 50.28
CDX82902 Canola endoplasmic reticulum, extracellular, vacuole 30.6 50.15
CDY41382 Canola endoplasmic reticulum, golgi 49.25 50.09
CDY58428 Canola endoplasmic reticulum, golgi, plastid 47.57 49.51
CDX98091 Canola extracellular 34.14 49.33
CDX77400 Canola endoplasmic reticulum, extracellular 44.78 48.78
GSMUA_Achr1P03320_001 Banana plasma membrane 46.27 48.53
CDY30041 Canola extracellular 33.58 48.52
CDX79122 Canola extracellular 34.33 45.89
CDY27438 Canola extracellular 34.51 45.34
CDX76388 Canola extracellular 34.14 44.85
CDX96854 Canola endoplasmic reticulum, extracellular, plasma membrane 37.87 44.32
CDY68729 Canola endoplasmic reticulum, extracellular, plasma membrane 37.87 44.32
CDY03043 Canola extracellular 37.69 44.01
CDY17432 Canola extracellular 37.5 43.79
CDY45202 Canola extracellular 37.5 43.79
CDY04133 Canola extracellular 37.31 43.57
CDY45254 Canola endoplasmic reticulum 37.13 43.45
CDY41679 Canola endoplasmic reticulum, plasma membrane 36.75 43.11
CDY28691 Canola endoplasmic reticulum, extracellular, vacuole 37.69 43.07
CDY39314 Canola extracellular 36.75 42.92
CDY09356 Canola extracellular 36.57 42.89
CDX81636 Canola endoplasmic reticulum 38.43 42.56
CDX74293 Canola endoplasmic reticulum, extracellular 37.31 42.46
CDX91953 Canola endoplasmic reticulum, extracellular 37.31 42.46
CDX70590 Canola endoplasmic reticulum, extracellular 37.5 42.32
CDX78607 Canola endoplasmic reticulum, extracellular 37.31 42.11
CDY53552 Canola extracellular 38.62 41.82
CDX85564 Canola extracellular 36.75 41.65
CDY63769 Canola extracellular 37.13 41.54
CDX69550 Canola endoplasmic reticulum, extracellular 37.87 40.68
CDY66593 Canola endoplasmic reticulum, extracellular 37.87 40.68
CDY70492 Canola endoplasmic reticulum, extracellular 1.49 14.55
CDX81635 Canola mitochondrion, nucleus 0.93 3.29
CDX96858 Canola mitochondrion, nucleus 0.93 3.29
CDY04136 Canola mitochondrion, nucleus 0.93 3.29
CDY09355 Canola mitochondrion, nucleus 0.93 3.29
CDY41678 Canola mitochondrion, nucleus 0.93 3.29
CDY45199 Canola mitochondrion, nucleus 0.93 3.29
CDY45253 Canola mitochondrion, nucleus 0.93 3.29
CDY53553 Canola mitochondrion, nucleus 0.93 3.29
CDY66531 Canola mitochondrion, nucleus 0.93 3.29
Protein Annotations
KEGG:00040+4.2.2.2MapMan:21.3.5.2GO:A0A078FJX5UniProt:A0A078FJX5InterPro:AmbAllergenEnsemblPlants:CDY13312
ProteinID:CDY13312ProteinID:CDY13312.1GO:GO:0003674GO:GO:0003824GO:GO:0005488GO:GO:0005575
GO:GO:0005975GO:GO:0008150GO:GO:0008152GO:GO:0009056GO:GO:0009987GO:GO:0016020
GO:GO:0016021GO:GO:0016829GO:GO:0030570GO:GO:0045490GO:GO:0046872EnsemblPlantsGene:GSBRNA2T00071299001
PFAM:PF00544PRINTS:PR00807PANTHER:PTHR31683PANTHER:PTHR31683:SF21InterPro:Pec_lyaseInterPro:Pectin_lyase_fold/virulence
SMART:SM00656SUPFAM:SSF51126TMHMM:TMhelixUniPathway:UPA00545UniParc:UPI0004EF4DD4SEG:seg
Description
BnaC06g14450DPectate lyase [Source:UniProtKB/TrEMBL;Acc:A0A078FJX5]
Coordinates
chrLK032034:-:215618..219334
Molecular Weight (calculated)
59174.3 Da
IEP (calculated)
6.357
GRAVY (calculated)
-0.208
Length
536 amino acids
Sequence
(BLAST)
001: MMLQRSCIVL FSLSLFVPYM SLAMLNKTLL LLPHPDPELV ARDVHRRVNA SLSRRQAMDT TDQTGSNPCF TGNPIDDCWK CDPNWPNNRQ GLADCGIGFG
101: QYALGGKGGR FYFVTDSSDD DAVEPKPGTL RYGVIQVEPL WIVFPSNMMI KLKQELIFNS YKTLDGRGAN VHIVGGGCIT LQYVSNVIIH NIHIHHCYQS
201: GGICCGTVLG CPVQAESEPS VLSEGLAQAV PKMEDNALGW FHRAAITSLF RQWTDHGSMS LRTKSDGDGI SIFGSKDIWI DHCSLSRCKD GLIDAVMGST
301: GITISNNFFS HHNEVMLLGH SDHYEPDSGM QVTIAFNHFG EKLIQRMPRC RRGYIHVVNN DFTQWEMYAI GGSGNPTINS QGNRFTAPSN PFAKEVTKRV
401: ETPDGEWKGW NWRSEGDILV NGAFFVASGE GAEMRYEKAY SVEPKSASFI DQITFHSGVL GVGGRNNNLG MWTTTGSEGN GGLDSYNDYT DEMSGTGSTN
501: RLSFSVIVLA FMLNLLSYLV IFTSSTQMFS FQPKCS
Best Arabidopsis Sequence Match ( AT3G53190.1 )
(BLAST)
001: MMLQRSCIVL FFSLFLLVPQ MVFSMLNRTL LLIPHPDPEL VAYQVQWKVN ASITRRQALD TTDQAGSTPC ITGNPIDDCW KCDPNWPNNR QGLADCGIGF
101: GQYALGGKGG QFYFVTDSSD DDAVNPKPGT LRYGVIQEEP LWIVFPSNMM IKLKQELIFN SYKTLDGRGA NVHIVGGGCI TLQYVSNIII HNIHIHHCYQ
201: SGNTNVRSSP THYGFRTKSD GDGISIFGSK DIWIDHCSLS RCKDGLIDAV MGSTGITISN NFFSHHNEVM LLGHSDHYEP DSGMQVTIAF NHFGEKLIQR
301: MPRCRRGYIH VVNNDFTQWE MYAIGGSGNP TINSQGNRYT APTNPFAKEV TKRVETPDGD WKGWNWRSEG DILVNGAFFV ASGEGAEMRY EKAYSVEPKS
401: ASFITQITFH SGVLGVGGRN NNLGMWTTTG SEGTSGLDSY NDYTDEMSGA GSTNRLSFSV LVFLLSSISY LVVFTSSTQM FML
Arabidopsis Description
Pectate lyase [Source:UniProtKB/TrEMBL;Acc:Q56XU8]
SUBAcon: [extracellular]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.