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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid, extracellular

Predictor Summary:
  • nucleus 1
  • plastid 3
  • extracellular 5
  • endoplasmic reticulum 4
  • vacuole 4
  • plasma membrane 4
  • golgi 4
Predictors GFP MS/MS Papers
Winner Takes All:extracellular, plastid
Any Predictor:nucleus, plastid, secretory
BaCelLo:nucleus
ChloroP:plastid
iPSORT:secretory
MultiLoc:plastid
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plastid
YLoc:extracellular
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra039081.1-P Field mustard extracellular, plastid 99.76 99.76
CDY20049 Canola plastid, vacuole 99.51 99.51
CDX83690 Canola endoplasmic reticulum, extracellular, vacuole 90.53 90.53
CDY34149 Canola extracellular 77.43 88.86
AT3G27400.2 Thale cress endoplasmic reticulum, vacuole 89.56 88.7
CDY03964 Canola extracellular 88.35 88.35
CDY18330 Canola cytosol 28.16 79.45
KRG93976 Soybean extracellular 75.24 76.73
KRH58231 Soybean extracellular 75.24 76.73
Solyc02g093580.2.1 Tomato endoplasmic reticulum, extracellular, vacuole 75.0 76.49
PGSC0003DMT400032910 Potato endoplasmic reticulum, extracellular, vacuole 74.76 76.43
VIT_14s0219g00230.t01 Wine grape endoplasmic reticulum, extracellular, vacuole 74.51 76.18
CDY08948 Canola endoplasmic reticulum, extracellular 72.82 73.89
CDY24847 Canola endoplasmic reticulum, extracellular 72.57 73.65
CDY34310 Canola endoplasmic reticulum, vacuole 72.09 73.15
CDY03419 Canola endoplasmic reticulum, extracellular 71.84 72.91
CDX92652 Canola endoplasmic reticulum, extracellular 71.12 72.17
CDY11033 Canola endoplasmic reticulum, extracellular 70.87 71.92
CDY56220 Canola endoplasmic reticulum, extracellular, vacuole 70.87 71.92
CDY01846 Canola endoplasmic reticulum, extracellular, vacuole 70.63 71.67
CDY28857 Canola extracellular 70.15 71.01
CDY56520 Canola extracellular 70.15 71.01
CDY41506 Canola endoplasmic reticulum, extracellular, vacuole 70.87 70.7
CDY70583 Canola cytosol 41.5 70.37
CDY12666 Canola extracellular 69.17 70.2
CDY32557 Canola extracellular 68.93 69.95
CDY48132 Canola endoplasmic reticulum, golgi 69.9 67.29
CDY16732 Canola endoplasmic reticulum, golgi 69.66 67.06
CDY65626 Canola golgi 70.63 64.1
CDY05305 Canola endoplasmic reticulum, extracellular, vacuole 64.32 63.7
CDY24654 Canola endoplasmic reticulum, extracellular, vacuole 64.08 63.46
CDY56668 Canola extracellular 63.84 62.92
CDY19932 Canola extracellular 63.59 62.68
CDY05655 Canola extracellular 62.86 62.11
CDY33938 Canola extracellular 62.86 62.11
CDX86615 Canola endoplasmic reticulum, extracellular, golgi 63.35 60.56
CDX89799 Canola extracellular 63.35 60.56
CDY15517 Canola endoplasmic reticulum, extracellular, golgi 63.11 60.32
CDY61137 Canola extracellular 63.11 60.32
CDY47327 Canola endoplasmic reticulum, extracellular 62.62 59.58
CDY01119 Canola endoplasmic reticulum, extracellular 62.86 59.54
CDY53564 Canola endoplasmic reticulum, extracellular, vacuole 64.56 58.46
CDY46471 Canola endoplasmic reticulum, extracellular 62.14 58.31
CDY01151 Canola endoplasmic reticulum, extracellular, vacuole 63.84 58.19
CDY18738 Canola endoplasmic reticulum, extracellular 64.81 56.09
CDY66697 Canola endoplasmic reticulum, golgi 60.19 55.48
CDX98092 Canola extracellular 47.82 55.34
CDY30040 Canola extracellular 47.57 55.06
CDX98091 Canola extracellular 49.27 54.72
CDX77470 Canola golgi, plasma membrane 60.92 54.68
CDY06557 Canola extracellular 51.21 54.52
CDY20748 Canola extracellular 51.21 54.38
CDY30041 Canola extracellular 48.79 54.18
CDX82902 Canola endoplasmic reticulum, extracellular, vacuole 42.72 53.82
CDX77400 Canola endoplasmic reticulum, extracellular 61.89 51.83
CDX79122 Canola extracellular 48.79 50.12
CDX70244 Canola vacuole 52.91 49.43
CDX76388 Canola extracellular 48.06 48.53
CDY27438 Canola extracellular 48.06 48.53
CDX78152 Canola extracellular 55.34 47.9
CDX73573 Canola extracellular 55.1 47.69
CDY68729 Canola endoplasmic reticulum, extracellular, plasma membrane 51.94 46.72
CDY28691 Canola endoplasmic reticulum, extracellular, vacuole 53.16 46.7
CDY17432 Canola extracellular 51.94 46.62
CDX74293 Canola endoplasmic reticulum, extracellular 53.16 46.5
CDX91953 Canola endoplasmic reticulum, extracellular 53.16 46.5
CDX67560 Canola plasma membrane 55.1 46.33
CDX96854 Canola endoplasmic reticulum, extracellular, plasma membrane 51.46 46.29
CDY04133 Canola extracellular 51.46 46.19
CDY03043 Canola extracellular 51.21 45.97
CDX70590 Canola endoplasmic reticulum, extracellular 52.91 45.89
CDY45202 Canola extracellular 50.97 45.75
CDY41679 Canola endoplasmic reticulum, plasma membrane 50.49 45.51
CDX78607 Canola endoplasmic reticulum, extracellular 52.43 45.47
CDY07515 Canola endoplasmic reticulum, extracellular, vacuole 54.13 45.33
CDY09356 Canola extracellular 50.24 45.3
CDX85564 Canola extracellular 51.94 45.24
CDX67615 Canola endoplasmic reticulum, extracellular, vacuole 53.88 45.21
CDY56964 Canola endoplasmic reticulum, extracellular, vacuole 53.64 44.92
CDY45254 Canola endoplasmic reticulum 49.76 44.76
CDY63769 Canola extracellular 51.94 44.68
CDY39314 Canola extracellular 49.76 44.66
CDY11284 Canola extracellular, golgi 54.61 44.12
CDY53552 Canola extracellular 52.18 43.43
CDX81636 Canola endoplasmic reticulum 50.97 43.39
CDY58428 Canola endoplasmic reticulum, golgi, plastid 54.13 43.3
CDX69550 Canola endoplasmic reticulum, extracellular 52.18 43.09
CDY66593 Canola endoplasmic reticulum, extracellular 52.18 43.09
CDY41382 Canola endoplasmic reticulum, golgi 54.61 42.69
CDX73426 Canola endoplasmic reticulum, extracellular, vacuole 53.4 42.55
CDY13312 Canola plasma membrane 54.85 42.16
CDY70492 Canola endoplasmic reticulum, extracellular 0.97 7.27
CDX81635 Canola mitochondrion, nucleus 0.49 1.32
CDX96858 Canola mitochondrion, nucleus 0.49 1.32
CDY04136 Canola mitochondrion, nucleus 0.49 1.32
CDY09355 Canola mitochondrion, nucleus 0.49 1.32
CDY41678 Canola mitochondrion, nucleus 0.49 1.32
CDY45199 Canola mitochondrion, nucleus 0.49 1.32
CDY45253 Canola mitochondrion, nucleus 0.49 1.32
CDY53553 Canola mitochondrion, nucleus 0.49 1.32
CDY66531 Canola mitochondrion, nucleus 0.49 1.32
Protein Annotations
KEGG:00040+4.2.2.2Gene3D:2.160.20.10MapMan:21.3.5.2GO:A0A078EGB1InterPro:AmbAllergenEnsemblPlants:CDY00156
ProteinID:CDY00156ProteinID:CDY00156.1GO:GO:0005975GO:GO:0008150GO:GO:0008152GO:GO:0009056
GO:GO:0009987GO:GO:0045490EnsemblPlantsGene:GSBRNA2T00109672001InterPro:IPR012334PFAM:PF00544PRINTS:PR00807
PANTHER:PTHR31683PANTHER:PTHR31683:SF29InterPro:Pec_lyaseInterPro:Pectin_lyas_foldInterPro:Pectin_lyase_fold/virulenceSMART:SM00656
SUPFAM:SSF51126UniPathway:UPA00545UniParc:UPI0004EBAF48SEG:seg::
Description
BnaC09g01450D
Coordinates
chrLK031916:-:1104296..1106752
Molecular Weight (calculated)
45562.6 Da
IEP (calculated)
7.123
GRAVY (calculated)
-0.392
Length
412 amino acids
Sequence
(BLAST)
001: MFSYSSNPFV YTFIFLLSVG NRIAFSSSSS PQAQDPKLVV DEVNRSVFNA SRRSLAYLSC RTGNPIDDCW RCDPNWDTNR QRLADCAIGF GKNAIGGRDG
101: RIYVVTDPGN DDPVNPIPGT LRHAVTQEEP LWIIFKRDMV IKLQKELIIT SFKTIDGRGA SVHITDGPCL KIHEKTNIII HGINIHDCKP GPGGMIRDGP
201: DHTGMWIPSD GDAVAIFGGK NVWIDHCSLS NCDDGLIDAI HGSTAITISN NHMTHHDKVM LLGHSDSYTE DKNMQVTIAF NHFGEGLVQR MPRCRHGYFH
301: VVNNDYTHWE MYAIGGSASP TIYSQGNRFL APDTRFNKEV TKHEDAPESQ WRDWNWRSEG DMLLNGAYFR QSGAGAPSTY ARASSLSARP SSLVGSITTT
401: AGALSCRRGG HC
Best Arabidopsis Sequence Match ( AT3G27400.1 )
(BLAST)
001: MVSYSNNHFA YAFLLLLTIG NTLAFSSSLP DHVQDPNLVV DDVNRSVFNA SRRSLAYLSC RTGNPIDDCW RCDPNWETNR QRLADCAIGF GKNAIGGRKG
101: RIYVVTDPAN DDPVNPRPGT LRYAVTQEEP LWIIFKRDMV IRLKKELIIT SFKTIDGRGS SVHITDGPCL KIHYATNIII HGINIHDCKP GSGGMIKDGP
201: HHTGWWMQSD GDAVAIFGGK HVWIDHCSLS NCDDGLIDAI HGSTAITISN NHMTHHDKVM LLGHSDSYTQ DKNMQVTIAF NHFGEGLVQR MPRCRHGYFH
301: VVNNDYTHWE MYAIGGSASP TIYSQGNRFL APNTRFNKEV TKHEDAPESK WRDWNWRSEG DMLLNGAYFR ESGAEAPSTY ARASSLSARP SSLVGSITTT
401: AGTLSCRRGR RC
Arabidopsis Description
Pectate lyase [Source:UniProtKB/TrEMBL;Acc:A0A1I9LNU6]
SUBAcon: [extracellular]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.