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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum, golgi, extracellular

Predictor Summary:
  • extracellular 7
  • endoplasmic reticulum 6
  • vacuole 5
  • plasma membrane 6
  • golgi 6
  • nucleus 1
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum, extracellular, golgi
Any Predictor:nucleus, plastid, secretory
BaCelLo:secretory
EpiLoc:nucleus
iPSORT:secretory
MultiLoc:endoplasmic reticulum
Plant-mPloc:extracellular, plasma membrane, plastid
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:extracellular
YLoc:golgi
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra030583.1-P Field mustard endoplasmic reticulum, extracellular, golgi 100.0 100.0
CDX86615 Canola endoplasmic reticulum, extracellular, golgi 98.14 98.14
AT1G04680.1 Thale cress extracellular 94.2 94.2
CDX89799 Canola extracellular 93.97 93.97
CDY61137 Canola extracellular 93.5 93.5
HORVU2Hr1G002930.1 Barley cytosol 52.2 82.12
VIT_05s0051g00590.t01 Wine grape endoplasmic reticulum, extracellular, golgi 79.12 79.3
CDY05305 Canola endoplasmic reticulum, extracellular, vacuole 74.71 77.4
GSMUA_Achr11P... Banana cytosol, extracellular, vacuole 64.5 77.22
CDY24654 Canola endoplasmic reticulum, extracellular, vacuole 74.48 77.16
GSMUA_Achr8P12860_001 Banana cytosol 62.65 76.49
KRH33474 Soybean nucleus 79.12 75.78
KRG90246 Soybean nucleus 78.42 75.45
CDY19932 Canola extracellular 73.09 75.36
CDY56668 Canola extracellular 73.09 75.36
CDY33938 Canola extracellular 72.85 75.3
GSMUA_Achr5P15620_001 Banana cytosol 61.25 75.21
CDY05655 Canola extracellular 72.62 75.06
GSMUA_Achr11P... Banana extracellular 63.34 75.0
GSMUA_Achr4P26690_001 Banana extracellular 63.81 74.93
CDY01151 Canola endoplasmic reticulum, extracellular, vacuole 77.49 73.89
CDY53564 Canola endoplasmic reticulum, extracellular, vacuole 77.96 73.85
PGSC0003DMT400076251 Potato extracellular 76.57 73.66
Solyc09g091430.2.1 Tomato nucleus 77.03 73.61
CDY18330 Canola cytosol 24.83 73.29
CDY46471 Canola endoplasmic reticulum, extracellular 73.32 71.98
CDY47327 Canola endoplasmic reticulum, extracellular 71.69 71.36
CDY01119 Canola endoplasmic reticulum, extracellular 71.69 71.03
GSMUA_Achr3P00290_001 Banana endoplasmic reticulum, extracellular, vacuole 66.36 69.59
GSMUA_Achr7P04580_001 Banana endoplasmic reticulum, extracellular 72.16 69.57
CDY18738 Canola endoplasmic reticulum, extracellular 76.8 69.54
Zm00001d004448_P001 Maize endoplasmic reticulum 72.16 69.42
Zm00001d025067_P001 Maize mitochondrion 71.46 67.84
CDY12666 Canola extracellular 63.81 67.73
CDY34310 Canola endoplasmic reticulum, vacuole 63.81 67.73
GSMUA_AchrUn_... Banana endoplasmic reticulum, golgi 71.23 67.62
CDY03419 Canola endoplasmic reticulum, extracellular 63.57 67.49
CDY32557 Canola extracellular 63.57 67.49
CDY56520 Canola extracellular 63.34 67.08
CDY08948 Canola endoplasmic reticulum, extracellular 63.11 67.0
CDY56220 Canola endoplasmic reticulum, extracellular, vacuole 63.11 67.0
CDY01846 Canola endoplasmic reticulum, extracellular, vacuole 62.88 66.75
CDY24847 Canola endoplasmic reticulum, extracellular 62.88 66.75
CDY70583 Canola cytosol 37.59 66.67
CDY28857 Canola extracellular 62.88 66.58
CDY11033 Canola endoplasmic reticulum, extracellular 62.65 66.5
CDY41506 Canola endoplasmic reticulum, extracellular, vacuole 63.57 66.34
CDX92652 Canola endoplasmic reticulum, extracellular 62.41 66.26
TraesCS2D01G018000.1 Wheat golgi 72.62 66.17
CDY66697 Canola endoplasmic reticulum, golgi 67.52 65.1
TraesCS2A01G016500.1 Wheat golgi 72.62 65.07
TraesCS2B01G024500.2 Wheat golgi 72.16 64.66
CDX77400 Canola endoplasmic reticulum, extracellular 73.32 64.23
CDX77470 Canola golgi, plasma membrane 68.21 64.05
KXG25802 Sorghum plastid 71.93 64.05
CDX83690 Canola endoplasmic reticulum, extracellular, vacuole 61.02 63.84
CDY16732 Canola endoplasmic reticulum, golgi 63.34 63.78
CDY48132 Canola endoplasmic reticulum, golgi 63.11 63.55
CDY00156 Canola extracellular, plastid 60.32 63.11
CDY03964 Canola extracellular 60.32 63.11
CDY20049 Canola plastid, vacuole 60.32 63.11
CDY34149 Canola extracellular 50.35 60.45
HORVU2Hr1G002880.2 Barley mitochondrion 71.46 60.39
CDY65626 Canola golgi 63.34 60.13
CDY06557 Canola extracellular 48.96 54.52
CDY20748 Canola extracellular 48.96 54.38
CDX98091 Canola extracellular 46.64 54.18
CDY30041 Canola extracellular 46.4 53.91
CDX82902 Canola endoplasmic reticulum, extracellular, vacuole 40.84 53.82
CDX98092 Canola extracellular 44.08 53.37
CDY30040 Canola extracellular 43.85 53.09
CDX70244 Canola vacuole 53.83 52.61
CDX73573 Canola extracellular 57.54 52.1
CDX78152 Canola extracellular 57.54 52.1
CDX67560 Canola plasma membrane 58.24 51.22
CDX79122 Canola extracellular 45.71 49.13
CDX67615 Canola endoplasmic reticulum, extracellular, vacuole 55.22 48.47
CDY07515 Canola endoplasmic reticulum, extracellular, vacuole 55.22 48.37
CDX76388 Canola extracellular 45.71 48.28
CDY27438 Canola extracellular 45.48 48.04
CDX70590 Canola endoplasmic reticulum, extracellular 52.2 47.37
CDY56964 Canola endoplasmic reticulum, extracellular, vacuole 54.06 47.36
CDY17432 Canola extracellular 50.35 47.28
CDY63769 Canola extracellular 52.44 47.18
CDX78607 Canola endoplasmic reticulum, extracellular 51.97 47.16
CDY04133 Canola extracellular 50.12 47.06
CDX85564 Canola extracellular 51.51 46.93
CDY03043 Canola extracellular 49.65 46.62
CDY45202 Canola extracellular 49.65 46.62
CDY11284 Canola extracellular, golgi 54.99 46.47
CDY68729 Canola endoplasmic reticulum, extracellular, plasma membrane 49.19 46.29
CDY13312 Canola plasma membrane 57.31 46.08
CDX96854 Canola endoplasmic reticulum, extracellular, plasma membrane 48.72 45.85
CDY28691 Canola endoplasmic reticulum, extracellular, vacuole 49.88 45.84
CDX74293 Canola endoplasmic reticulum, extracellular 49.88 45.65
CDX91953 Canola endoplasmic reticulum, extracellular 49.88 45.65
CDY58428 Canola endoplasmic reticulum, golgi, plastid 54.52 45.63
CDX73426 Canola endoplasmic reticulum, extracellular, vacuole 54.29 45.26
CDY45254 Canola endoplasmic reticulum 48.03 45.2
CDY41382 Canola endoplasmic reticulum, golgi 55.22 45.16
CDX69550 Canola endoplasmic reticulum, extracellular 51.97 44.89
CDY39314 Canola extracellular 47.8 44.88
CDY66593 Canola endoplasmic reticulum, extracellular 51.74 44.69
CDY41679 Canola endoplasmic reticulum, plasma membrane 46.87 44.2
CDY09356 Canola extracellular 46.64 43.98
CDX81636 Canola endoplasmic reticulum 48.03 42.77
CDY53552 Canola extracellular 48.72 42.42
CDY70492 Canola endoplasmic reticulum, extracellular 0.93 7.27
CDX81635 Canola mitochondrion, nucleus 0.46 1.32
CDX96858 Canola mitochondrion, nucleus 0.46 1.32
CDY04136 Canola mitochondrion, nucleus 0.46 1.32
CDY09355 Canola mitochondrion, nucleus 0.46 1.32
CDY41678 Canola mitochondrion, nucleus 0.46 1.32
CDY45199 Canola mitochondrion, nucleus 0.46 1.32
CDY45253 Canola mitochondrion, nucleus 0.46 1.32
CDY53553 Canola mitochondrion, nucleus 0.46 1.32
CDY66531 Canola mitochondrion, nucleus 0.46 1.32
Protein Annotations
KEGG:00040+4.2.2.2Gene3D:2.160.20.10MapMan:21.3.5.2GO:A0A078FRS3UniProt:A0A078FRS3InterPro:AmbAllergen
EnsemblPlants:CDY15517ProteinID:CDY15517ProteinID:CDY15517.1GO:GO:0003674GO:GO:0003824GO:GO:0005488
GO:GO:0005975GO:GO:0008150GO:GO:0008152GO:GO:0009056GO:GO:0009987GO:GO:0016829
GO:GO:0030570GO:GO:0045490GO:GO:0046872EnsemblPlantsGene:GSBRNA2T00089687001InterPro:IPR012334PFAM:PF00544
PRINTS:PR00807PANTHER:PTHR31683PANTHER:PTHR31683:SF63InterPro:Pec_lyaseInterPro:Pectin_lyas_foldInterPro:Pectin_lyase_fold/virulence
SMART:SM00656SUPFAM:SSF51126SignalP:SignalP-noTMUniPathway:UPA00545UniParc:UPI00025456E9SEG:seg
Description
BnaA08g28010DPectate lyase [Source:UniProtKB/TrEMBL;Acc:A0A078FRS3]
Coordinates
chrLK032055:-:327443..330047
Molecular Weight (calculated)
47929.7 Da
IEP (calculated)
8.244
GRAVY (calculated)
-0.357
Length
431 amino acids
Sequence
(BLAST)
001: MTVLPTWILA MMCLFFFVGA MENKTHDKIS SLSRSDEIEW NRHAVTNPDE VADEVLALVE MSARNHTERR KLGYFTCGTG NPIDDCWRCD RNWHKNRKRL
101: ADCGIGFGRN AIGGRDGRFY VVTDPSDHDA VNPRPGTLRH AVIQDRPLWI VFKRDMVIQL KQELIVNSFK TIDGRGANVH IANGGCITIQ FVTNVIVHGL
201: HIHDCRPTGN AMVRSSETHF GWRTMADGDA ISIFESSHVW IDHNSLSHCA DGLVDAVMGS TAITISNNHM THHNEVMLLG HSDSYTKDRA MQVTIAYNHF
301: GVGLIQRMPR CRHGYFHVVN NDYTHWEMYA IGGSANPTIN SQGNRYAAPK NPFAKEVTKR VDTPASHWKG WNWRSEGDLL QNGAYFTSSG AAASGSYARA
401: SSLAAKSSSL VATITSEAGA LPCRRGRQCS S
Best Arabidopsis Sequence Match ( AT1G04680.1 )
(BLAST)
001: MAVLPTWLLA MMCLLFFVGA MENTTHDNIS SLPRSDETEW NQHAVTNPDE VADEVLALTE MSVRNHTERR KLGYFTCGTG NPIDDCWRCD PNWHKNRKRL
101: ADCGIGFGRN AIGGRDGRFY VVTDPRDDNP VNPRPGTLRH AVIQDRPLWI VFKRDMVIQL KQELIVNSFK TIDGRGANVH IANGGCITIQ FVTNVIVHGL
201: HIHDCKPTGN AMVRSSETHF GWRTMADGDA ISIFGSSHVW IDHNSLSHCA DGLVDAVMGS TAITISNNHL THHNEVMLLG HSDSYMRDKA MQVTIAYNHF
301: GVGLIQRMPR CRHGYFHVVN NDYTHWEMYA IGGSANPTIN SQGNRYAAPK NPFAKEVTKR VDTPASHWKG WNWRSEGDLL QNGAYFTSSG AAASGSYARA
401: SSLSAKSSSL VGHITSDAGA LPCRRGRQCS S
Arabidopsis Description
Pectate lyase [Source:UniProtKB/TrEMBL;Acc:A0A178W464]
SUBAcon: [extracellular]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.