Factsheet for HORVU2Hr1G002880.2

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 3
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	golgi, mitochondrion
iPSORT:	mitochondrion
MultiLoc:	golgi
TargetP:	mitochondrion
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU2Hr1G002930.1	Barley	cytosol	53.73	100.0
TraesCS2D01G018000.1	Wheat	golgi	86.47	93.23
TraesCS2A01G016500.1	Wheat	golgi	87.25	92.52
TraesCS2B01G024500.2	Wheat	golgi	85.88	91.06
Zm00001d025067_P001	Maize	mitochondrion	74.9	84.14
Zm00001d004448_P001	Maize	endoplasmic reticulum	72.94	83.04
KXG25802	Sorghum	plastid	77.84	82.02
VIT_05s0051g00590.t01	Wine grape	endoplasmic reticulum, extracellular, golgi	65.29	77.44
GSMUA_Achr3P00290_001	Banana	endoplasmic reticulum, extracellular, vacuole	61.76	76.64
GSMUA_Achr7P04580_001	Banana	endoplasmic reticulum, extracellular	66.67	76.06
GSMUA_AchrUn_...	Banana	endoplasmic reticulum, golgi	66.67	74.89
KRH33474	Soybean	nucleus	64.9	73.56
KRG90246	Soybean	nucleus	64.31	73.21
Bra040809.1-P	Field mustard	endoplasmic reticulum, golgi, vacuole	60.2	72.58
CDY15517	Canola	endoplasmic reticulum, extracellular, golgi	60.39	71.46
CDY61137	Canola	extracellular	60.39	71.46
Bra030583.1-P	Field mustard	endoplasmic reticulum, extracellular, golgi	60.39	71.46
CDX86615	Canola	endoplasmic reticulum, extracellular, golgi	60.2	71.23
Bra015341.1-P	Field mustard	extracellular	60.2	71.23
PGSC0003DMT400076251	Potato	extracellular	62.55	71.21
CDX89799	Canola	extracellular	60.0	71.0
Bra032494.1-P	Field mustard	extracellular	60.0	71.0
AT1G04680.1	Thale cress	extracellular	60.0	71.0
Solyc09g091430.2.1	Tomato	nucleus	62.75	70.95
Bra032730.1-P	Field mustard	endoplasmic reticulum, extracellular, vacuole	61.96	70.07
CDY53564	Canola	endoplasmic reticulum, extracellular, vacuole	62.35	69.89
CDY01151	Canola	endoplasmic reticulum, extracellular, vacuole	61.76	69.69
AT4G13710.1	Thale cress	endoplasmic reticulum, extracellular, vacuole	62.55	67.87
CDY18738	Canola	endoplasmic reticulum, extracellular	61.96	66.39
Bra015000.1-P	Field mustard	golgi, plasma membrane	56.27	64.21
CDY66697	Canola	endoplasmic reticulum, golgi	56.08	63.98
AT3G24230.1	Thale cress	endoplasmic reticulum, golgi, vacuole	56.47	63.72
CDX77470	Canola	golgi, plasma membrane	56.47	62.75
HORVU5Hr1G005000.2	Barley	cytosol	39.61	59.24
HORVU1Hr1G038220.7	Barley	endoplasmic reticulum, extracellular	50.98	53.39
HORVU6Hr1G038630.1	Barley	extracellular	42.35	53.33
HORVU6Hr1G027330.1	Barley	extracellular	39.61	52.88
HORVU7Hr1G085860.1	Barley	endoplasmic reticulum, extracellular, vacuole	43.73	50.23
HORVU7Hr1G019500.1	Barley	mitochondrion	44.71	43.85

Protein Annotations

EnsemblPlants:HORVU2Hr1G002880.2	EnsemblPlantsGene:HORVU2Hr1G002880	Gene3D:2.160.20.10	InterPro:AmbAllergen	InterPro:IPR012334	InterPro:Pec_lyase
InterPro:Pectin_lyas_fold	InterPro:Pectin_lyase_fold/virulence	KEGG:00040+4.2.2.2	PANTHER:PTHR31683	PANTHER:PTHR31683:SF34	PFAM:PF00544
PRINTS:PR00807	SEG:seg	SMART:SM00656	SUPFAM:SSF51126	TMHMM:TMhelix	MapMan:21.3.5.2

Description

No Description!

Coordinates

chrchr2H:-:6354026..6497366

Molecular Weight (calculated)

54621.6 Da

IEP (calculated)

9.112

GRAVY (calculated)

-0.166

Length

510 amino acids

Sequence
(BLAST)

001: APQISFPFPL SLRRARAAFR AREREWSALA AKAMADQAAA RRRRAALALA GAVSLLLLVV VALSGGADLA GISGGKPRSG GTAASTAKVV VTAAASGARR
101: WLRDSTSRLA ATATARSERT DGSAAVAGAV DDPETVVSQV HMSIRNSTAR RNLGYLSCGT GNPIDDCWRC DSDWHNNRQR LADCGIGFGR NAIGGRDGKI
201: YVVTDAGDDD PVNPKKGTLR YAVIQDEPLW IIFKRDMVIT LSQELIMNSF KTIDGRGANV HIANGACITI QYVTNVIIHG LHIHDCRPTG NAMVRSSPSH
301: YGWRTIADGD AVSIFGASHV WVDHCSLSNC ADGLIDAIMG STAITVSNNY FTHHNEVMLL GHSDSYLKDK AMQVTIAFNH FGEGLIQRMP RCRHGYFHVV
401: NNDYTHWEMY AIGGSAEPTI NSQGNRYLAP TNPFAKEVTK RVETAQTTWK AWNWRSEGDM LLNGAFFTPS GAGASASYSR ASSLGAKSSS MVATITSGAG
501: ALSCHKGSSC

Best Arabidopsis Sequence Match ( AT4G13710.1 )
(BLAST)

001: MASSSQKLIS VCVAVLVVLA LTAMIFRNSE ISLSRKLKTE VIQSSNSSTM AAIRKLKTEE FQSLNSSTMA ATRLDGEPQQ QQHAVADDPD MVADEVAKLV
101: QMSEQNRTAR RKLGFFSCGT GNPIDDCWRC DRNWHKNRKR LADCGIGFGR NAIGGRDGRF YIVTDPTDED VVNPKPGTLR HAVIQEEPLW IVFKRDMVIE
201: LKQELIMNSF KTIDARGSNV HIANGACITI QFITNVIIHG LHIHDCKPTG NAMVRSSPSH FGWRTMADGD AVSIFGSSHI WIDHNSLSHC ADGLVDAVMG
301: STAITVSNNH FTHHNEVMLL GHSDSYTKDK LMQVTIAYNH FGEGLVQRMP RCRHGYFHVV NNDYTHWEMY AIGGSAEPTI NSQGNRYAAP MDRFAKEVTK
401: RVETDASEWK KWNWRSEGDL LLNGAFFRPS GAGASASYGR ASSLAAKPSS MVDTITSTAG ALGCRKGRPC

Arabidopsis Description

Probable pectate lyase 15 [Source:UniProtKB/Swiss-Prot;Acc:Q944R1]
SUBAcon: [endoplasmic reticulum,extracellular,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.