Factsheet for TraesCS2B01G024500.2

Subcellular Localization

min:

: max

Winner_takes_all: golgi

Predictor Summary:

plastid 2
mitochondrion 2
golgi 4
extracellular 2
endoplasmic reticulum 2
vacuole 2
plasma membrane 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi
Any Predictor:	mitochondrion, plastid, secretory
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	golgi
Predotar:	secretory
PProwler:	secretory
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU2Hr1G002930.1	Barley	cytosol	56.55	99.27
TraesCS2D01G018000.1	Wheat	golgi	95.43	97.04
TraesCS2A01G016500.1	Wheat	golgi	96.26	96.26
HORVU2Hr1G002880.2	Barley	mitochondrion	91.06	85.88
Zm00001d025067_P001	Maize	mitochondrion	80.04	84.8
KXG25802	Sorghum	plastid	83.99	83.47
Zm00001d004448_P001	Maize	endoplasmic reticulum	77.34	83.04
VIT_05s0051g00590.t01	Wine grape	endoplasmic reticulum, extracellular, golgi	70.69	79.07
GSMUA_Achr3P00290_001	Banana	endoplasmic reticulum, extracellular, vacuole	66.11	77.37
GSMUA_Achr7P04580_001	Banana	endoplasmic reticulum, extracellular	71.31	76.73
GSMUA_AchrUn_...	Banana	endoplasmic reticulum, golgi	70.69	74.89
KRH33474	Soybean	nucleus	69.85	74.67
KRG90246	Soybean	nucleus	69.44	74.55
Bra040809.1-P	Field mustard	endoplasmic reticulum, golgi, vacuole	65.07	74.0
PGSC0003DMT400076251	Potato	extracellular	67.57	72.54
Solyc09g091430.2.1	Tomato	nucleus	67.78	72.28
Bra030583.1-P	Field mustard	endoplasmic reticulum, extracellular, golgi	64.66	72.16
CDY15517	Canola	endoplasmic reticulum, extracellular, golgi	64.66	72.16
CDY61137	Canola	extracellular	64.66	72.16
AT1G04680.1	Thale cress	extracellular	64.66	72.16
CDX86615	Canola	endoplasmic reticulum, extracellular, golgi	64.24	71.69
Bra015341.1-P	Field mustard	extracellular	64.24	71.69
Bra032494.1-P	Field mustard	extracellular	64.24	71.69
CDX89799	Canola	extracellular	64.03	71.46
Bra032730.1-P	Field mustard	endoplasmic reticulum, extracellular, vacuole	66.74	71.18
CDY53564	Canola	endoplasmic reticulum, extracellular, vacuole	67.15	70.99
CDY01151	Canola	endoplasmic reticulum, extracellular, vacuole	66.53	70.8
AT4G13710.1	Thale cress	endoplasmic reticulum, extracellular, vacuole	67.36	68.94
CDY18738	Canola	endoplasmic reticulum, extracellular	66.94	67.65
CDY66697	Canola	endoplasmic reticulum, golgi	60.5	65.1
Bra015000.1-P	Field mustard	golgi, plasma membrane	60.5	65.1
AT3G24230.1	Thale cress	endoplasmic reticulum, golgi, vacuole	60.29	64.16
CDX77470	Canola	golgi, plasma membrane	60.71	63.62
TraesCS1B01G161000.1	Wheat	endoplasmic reticulum, extracellular, plasma membrane	55.51	56.09
TraesCS6B01G168400.1	Wheat	plastid	43.45	55.0
TraesCS6B01G211900.1	Wheat	extracellular, golgi, vacuole	46.15	52.24
TraesCS7B01G261700.1	Wheat	endoplasmic reticulum, extracellular, vacuole	44.91	48.65

Protein Annotations

EnsemblPlants:TraesCS2B01G024500.2	EnsemblPlantsGene:TraesCS2B01G024500	Gene3D:2.160.20.10	InterPro:AmbAllergen	InterPro:IPR012334	InterPro:Pec_lyase
InterPro:Pectin_lyas_fold	InterPro:Pectin_lyase_fold/virulence	KEGG:00040+4.2.2.2	PANTHER:PTHR31683	PANTHER:PTHR31683:SF34	PFAM:PF00544
PRINTS:PR00807	SEG:seg	SMART:SM00656	SUPFAM:SSF51126	TMHMM:TMhelix	MapMan:21.3.5.2

Description

No Description!

Coordinates

chr2B:-:11359042..11363629

Molecular Weight (calculated)

51395.6 Da

IEP (calculated)

8.364

GRAVY (calculated)

-0.197

Length

481 amino acids

Sequence
(BLAST)

001: MAEQAGARRR RWPAALAALG AVSVLLLLAA LSGGGGVGIA GLSGARLRSG ASTAKVVTAA ANGARRWLRD STSRLTATAT ATATARGERA DDHADGSAVA
101: VEDPEAVVSQ VHMSIRNSTA RRNLGYLSCG TGNPIDDCWR CDSDWHNNRQ RLADCGIGFG RNAIGGRDGK IYVVTDAGDD DPVNPKKGTL RHAVIQDEPL
201: WIVFKRDMVI TLSQELIMNS FKTIDGRGAN VHIANGACIT IQYVTNVIIH GLHIHDCRPT GNAMVRSSPS HYGWRTMADG DAVSIFGASH VWVDHCSLSN
301: CADGLVDAIM GSTAITVSNN YFTHHNEVML LGHSDSYLKD KAMQVTIAFN HFGEGLIQRM PRCRHGYFHV VNNDYTHWEM YAIGGSAEPT INSQGNRYLA
401: PTNPFAKEVT KRVETAQTTW KAWNWRSEGD MLLNGAFFTP SGAGASASYS RASSLGAKSS SMVATITSGA GALSCHKGSS C

Best Arabidopsis Sequence Match ( AT4G13710.1 )
(BLAST)

001: MASSSQKLIS VCVAVLVVLA LTAMIFRNSE ISLSRKLKTE VIQSSNSSTM AAIRKLKTEE FQSLNSSTMA ATRLDGEPQQ QQHAVADDPD MVADEVAKLV
101: QMSEQNRTAR RKLGFFSCGT GNPIDDCWRC DRNWHKNRKR LADCGIGFGR NAIGGRDGRF YIVTDPTDED VVNPKPGTLR HAVIQEEPLW IVFKRDMVIE
201: LKQELIMNSF KTIDARGSNV HIANGACITI QFITNVIIHG LHIHDCKPTG NAMVRSSPSH FGWRTMADGD AVSIFGSSHI WIDHNSLSHC ADGLVDAVMG
301: STAITVSNNH FTHHNEVMLL GHSDSYTKDK LMQVTIAYNH FGEGLVQRMP RCRHGYFHVV NNDYTHWEMY AIGGSAEPTI NSQGNRYAAP MDRFAKEVTK
401: RVETDASEWK KWNWRSEGDL LLNGAFFRPS GAGASASYGR ASSLAAKPSS MVDTITSTAG ALGCRKGRPC

Arabidopsis Description

Probable pectate lyase 15 [Source:UniProtKB/Swiss-Prot;Acc:Q944R1]
SUBAcon: [endoplasmic reticulum,extracellular,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.