Factsheet for Bra024811.1-P

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 9
endoplasmic reticulum 5
vacuole 5
plasma membrane 6
golgi 5
nucleus 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	nucleus, plastid, secretory
BaCelLo:	secretory
EpiLoc:	nucleus
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	extracellular, plasma membrane, plastid
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY45202	Canola	extracellular	99.35	99.35
Bra017412.1-P	Field mustard	extracellular	85.4	85.4
AT2G02720.1	Thale cress	extracellular, vacuole	83.01	83.74
Bra026583.1-P	Field mustard	endoplasmic reticulum, plasma membrane	81.05	81.4
Bra026832.1-P	Field mustard	extracellular	72.55	73.67
Bra016700.1-P	Field mustard	endoplasmic reticulum, extracellular, plasma membrane	72.55	72.71
Bra026221.1-P	Field mustard	endoplasmic reticulum	71.68	71.83
VIT_14s0108g00030.t01	Wine grape	endoplasmic reticulum, extracellular, vacuole	55.77	58.31
TraesCS4A01G385700.1	Wheat	cytosol	27.67	57.99
KRH45851	Soybean	extracellular	56.43	57.43
VIT_01s0026g01670.t01	Wine grape	endoplasmic reticulum, extracellular, vacuole	55.12	57.11
GSMUA_Achr2P16830_001	Banana	endoplasmic reticulum, extracellular	54.25	56.85
GSMUA_Achr6P00830_001	Banana	endoplasmic reticulum, extracellular	53.81	56.52
KRH74782	Soybean	extracellular	54.47	55.8
Solyc03g058890.2.1	Tomato	extracellular	54.47	55.68
GSMUA_Achr10P...	Banana	extracellular	47.28	55.64
KRH69345	Soybean	extracellular	53.81	55.26
PGSC0003DMT400017863	Potato	extracellular	53.16	55.2
Solyc02g087670.2.1	Tomato	extracellular	53.59	55.16
PGSC0003DMT400014086	Potato	extracellular	53.59	55.03
PGSC0003DMT400003310	Potato	extracellular	53.38	54.93
GSMUA_Achr10P...	Banana	cytosol	41.39	54.91
VIT_01s0026g01680.t01	Wine grape	endoplasmic reticulum, extracellular	52.07	53.95
Zm00001d000216_P001	Maize	golgi, vacuole	50.76	53.2
PGSC0003DMT400017862	Potato	endoplasmic reticulum, extracellular	45.75	52.9
Bra032696.1-P	Field mustard	endoplasmic reticulum, extracellular	46.84	52.06
Zm00001d046389_P007	Maize	endoplasmic reticulum, extracellular	49.02	51.96
Os06t0144200-01	Rice	extracellular, plasma membrane	50.76	51.78
Bra006279.1-P	Field mustard	endoplasmic reticulum, extracellular	53.16	51.37
OQU75805	Sorghum	mitochondrion	49.24	51.13
HORVU6Hr1G038630.1	Barley	extracellular	45.1	51.11
Bra033980.1-P	Field mustard	extracellular	45.1	50.99
Bra013833.1-P	Field mustard	endoplasmic reticulum, vacuole	44.88	50.74
Bra039081.1-P	Field mustard	extracellular, plastid	45.53	50.73
Os06t0583900-01	Rice	plasma membrane	49.46	50.67
Bra004254.1-P	Field mustard	endoplasmic reticulum, extracellular, vacuole	44.66	50.49
TraesCS7A01G086600.1	Wheat	endoplasmic reticulum, extracellular	49.24	50.45
Bra004073.1-P	Field mustard	extracellular	44.66	50.37
EES06507	Sorghum	golgi, vacuole	48.8	50.34
Bra001011.1-P	Field mustard	endoplasmic reticulum, extracellular	51.63	50.32
Bra035852.1-P	Field mustard	extracellular	44.88	50.24
EER88571	Sorghum	endoplasmic reticulum, plasma membrane	49.67	50.22
Bra023504.1-P	Field mustard	extracellular	52.51	50.1
Os06t0144900-01	Rice	mitochondrion	51.2	49.68
Bra030583.1-P	Field mustard	endoplasmic reticulum, extracellular, golgi	46.62	49.65
Bra032494.1-P	Field mustard	extracellular	46.62	49.65
Bra040809.1-P	Field mustard	endoplasmic reticulum, golgi, vacuole	45.75	49.65
Bra010482.1-P	Field mustard	endoplasmic reticulum, extracellular	43.79	49.51
Bra025274.1-P	Field mustard	extracellular	44.23	49.27
Zm00001d036158_P001	Maize	endoplasmic reticulum, extracellular, vacuole	48.58	49.23
Bra015341.1-P	Field mustard	extracellular	46.19	49.19
Bra020672.1-P	Field mustard	extracellular	44.66	49.16
Bra038614.1-P	Field mustard	endoplasmic reticulum, extracellular, plasma membrane	44.23	49.15
EER87830	Sorghum	endoplasmic reticulum, extracellular, vacuole	49.67	49.03
Os02t0214400-01	Rice	plasma membrane	47.49	48.88
TraesCS7D01G356700.1	Wheat	extracellular	47.28	48.87
Bra036155.1-P	Field mustard	extracellular	44.44	48.8
TraesCS7A01G365700.1	Wheat	endoplasmic reticulum, extracellular, vacuole	47.06	48.65
Bra029614.1-P	Field mustard	endoplasmic reticulum, extracellular, vacuole	42.92	48.64
Bra008721.1-P	Field mustard	endoplasmic reticulum, extracellular	52.72	48.5
PGSC0003DMT400014085	Potato	extracellular, golgi	42.05	48.49
Solyc03g058910.2.1	Tomato	extracellular, golgi	41.83	48.24
TraesCS6D01G170500.1	Wheat	golgi	44.66	48.24
HORVU7Hr1G085860.1	Barley	endoplasmic reticulum, extracellular, vacuole	46.62	48.2
TraesCS7B01G261700.1	Wheat	endoplasmic reticulum, extracellular, vacuole	46.62	48.2
TraesCS6B01G211900.1	Wheat	extracellular, golgi, vacuole	44.44	48.0
Bra033008.1-P	Field mustard	extracellular	41.61	47.99
Bra032730.1-P	Field mustard	endoplasmic reticulum, extracellular, vacuole	47.06	47.89
Bra019729.1-P	Field mustard	extracellular	38.13	47.3
Bra035588.1-P	Field mustard	extracellular	39.65	46.91
Bra019730.1-P	Field mustard	extracellular	39.22	46.75
Zm00001d036945_P001	Maize	endoplasmic reticulum	42.27	46.19
Bra019209.1-P	Field mustard	endoplasmic reticulum, extracellular	41.61	45.91
Bra015000.1-P	Field mustard	golgi, plasma membrane	44.44	45.64
Bra020859.1-P	Field mustard	extracellular	39.22	45.57
Bra013585.1-P	Field mustard	extracellular	39.0	45.55
TraesCS6A01G184500.2	Wheat	extracellular, golgi, vacuole	45.1	44.71
HORVU7Hr1G019500.1	Barley	mitochondrion	49.67	43.85
Bra006976.1-P	Field mustard	cytosol	43.57	43.76
Bra015070.1-P	Field mustard	endoplasmic reticulum, extracellular	45.97	42.89
Bra028549.1-P	Field mustard	plasma membrane	44.44	41.63
Bra012756.1-P	Field mustard	extracellular	34.64	40.87
Bra007116.1-P	Field mustard	endoplasmic reticulum, extracellular	43.36	40.61
Bra003200.1-P	Field mustard	endoplasmic reticulum, extracellular	42.92	40.12
GSMUA_Achr7P08840_001	Banana	nucleus	54.68	37.46
Solyc02g067450.2.1	Tomato	extracellular	50.11	37.34
Bra005799.1-P	Field mustard	extracellular, golgi	41.39	37.11
Bra009469.1-P	Field mustard	extracellular, plastid, vacuole	41.18	36.07

Protein Annotations

KEGG:00040+4.2.2.2	Gene3D:2.160.20.10	MapMan:21.3.5.2	InterPro:AmbAllergen	EnsemblPlantsGene:Bra024811	EnsemblPlants:Bra024811.1
EnsemblPlants:Bra024811.1-P	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005975	GO:GO:0008150
GO:GO:0008152	GO:GO:0009056	GO:GO:0009987	GO:GO:0016829	GO:GO:0030570	GO:GO:0045490
GO:GO:0046872	InterPro:IPR012334	UniProt:M4E7Q5	PFAM:PF00544	PFAM:PF04431	PRINTS:PR00807
PANTHER:PTHR31683	PANTHER:PTHR31683:SF14	InterPro:Pec_lyase	InterPro:Pec_lyase_N	InterPro:Pectin_lyas_fold	InterPro:Pectin_lyase_fold/virulence
SMART:SM00656	SUPFAM:SSF51126	SignalP:SignalP-noTM	UniParc:UPI000253F8C6	SEG:seg	:

Description

AT2G02720 (E=6e-199) | pectate lyase family protein

Coordinates

chrA06:-:23567511..23569583

Molecular Weight (calculated)

51620.7 Da

IEP (calculated)

10.367

GRAVY (calculated)

-0.520

Length

459 amino acids

Sequence
(BLAST)

001: MASAHLNLGS YVFAFVSLSL AVVAPSVQGH VAVYDEYWTQ RQTDALRETI KSYDPNPFNV TDHFNHHAAL AMETTGADNG TRRELRQVRR GRKTRRRGGR
101: HHSLNAIDKC WRGDKNWHKN RKKLADCVLG FGRKTTGGKK GQFYVVTDAS DHDLINPKPG TLRHAVTRDR PLWIIFGRSM IIKLQQELII THDKTIDGRG
201: ANVHIMGGAG LTLQFVKNVI IHNIHIKHIK CGAGGMIRDC EHHVGQRSKS DGDGINIFGA TNIWIDHVSM THCSDGMIDA IMGSTAITIS NSHLTDHNEV
301: LLFGGKDGDV IDKKMQITVA FNHFGKRLVQ RMPRVRYGLV HVVNNDYTHW EMYAIGGNKN PTIISQGNRF IAPHKETCKQ VTKREYTPYT EWKSWNWQSE
401: RDYFLNGAYF VNSGRANAWS PAPKNPIHRK FAIRPQSGTG VRRLTKDAGT LGCTPGKSC

Best Arabidopsis Sequence Match ( AT2G02720.1 )
(BLAST)

001: MVNLGSYVFV FVALSLTVVV PSVQAHIAEY DEYWTQRQTN ALRETLESYD PNPENVTDHF NYHAALAMET TGIVNETRRD LRQVGRGKKT TRRGGRFESL
101: NAIDKCWRGD KNWDKNRKKL ADCVLGFGRK TTGGKNGPIY VVTDPSDNDL LKPKPGTIRH AVTRDRPLWI IFARSMIIKL QQELIITNDK TIDGRGAKIY
201: ITGGAGLTLQ FVRNVIIHNI HIKQIKRGAG GLIIDSEQHF GLRTVSDGDG INIFGATNVW IDHVSMTDCS DGMIDAIMGS TAITISNSHF TDHDEVMLFG
301: GTNKDVIDKK MQITVAFNHF GKRLKQRMPR VRFGLVHVVN NDYTHWEMYA IGGNMNPTII SQGNRFIAPP IEDSKQVTKR EYTPYPEWKS WNWQSEKDYF
401: LNGAYFVQSG KANAWSATPK NPIPRKFAIR PQPGTKVRRL TKDAGTLGCK PGKSC

Arabidopsis Description

Probable pectate lyase 6 [Source:UniProtKB/Swiss-Prot;Acc:O64510]
SUBAcon: [extracellular,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.