CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 8
endoplasmic reticulum 5
vacuole 5
plasma membrane 6
golgi 5
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	cytosol, secretory
BaCelLo:	secretory
EpiLoc:	cytosol
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH36487	Soybean	extracellular	64.34	84.21
KRH02031	Soybean	extracellular	82.31	77.14
KRH36488	Soybean	extracellular	76.14	71.54
PGSC0003DMT400042395	Potato	extracellular	67.02	65.62
VIT_10s0116g01160.t01	Wine grape	endoplasmic reticulum, extracellular	66.49	65.09
KRH03893	Soybean	nucleus	60.32	55.42
KRH57176	Soybean	nucleus	60.32	55.42
KRG93976	Soybean	extracellular	58.98	54.46
KRH31375	Soybean	nucleus	58.45	54.23
KRH58231	Soybean	extracellular	57.91	53.47
KRH63675	Soybean	endoplasmic reticulum, extracellular, vacuole	57.91	52.94
KRG97506	Soybean	endoplasmic reticulum, golgi	57.37	52.84
KRH54276	Soybean	endoplasmic reticulum, golgi, vacuole	57.64	52.7
KRG97507	Soybean	endoplasmic reticulum, extracellular	54.16	51.53
KRH31373	Soybean	extracellular	49.33	49.6
KRG90246	Soybean	nucleus	58.18	48.44
KRH33474	Soybean	nucleus	58.18	48.22
KRH46795	Soybean	nucleus	57.37	47.45
KRG99852	Soybean	nucleus	57.37	47.45
KRH54508	Soybean	extracellular	42.09	47.15
KRH45851	Soybean	extracellular	52.55	43.46
KRH74782	Soybean	extracellular	52.01	43.3
KRH69345	Soybean	extracellular	51.47	42.95
KRH67761	Soybean	endoplasmic reticulum, extracellular, vacuole	53.62	42.55
KRH19954	Soybean	endoplasmic reticulum, extracellular, plasma membrane	54.16	42.35
KRH18498	Soybean	endoplasmic reticulum, extracellular, vacuole	49.87	41.99
KRH63402	Soybean	extracellular	48.79	41.84
KRG93502	Soybean	extracellular	49.6	41.76
KRH01130	Soybean	extracellular	49.06	41.59
CDY41679	Canola	endoplasmic reticulum, plasma membrane	50.94	41.58
CDY09356	Canola	extracellular	50.67	41.36
CDY45254	Canola	endoplasmic reticulum	50.13	40.83
KRG90767	Soybean	extracellular	53.08	39.44
KRH35994	Soybean	extracellular	52.81	39.09
Solyc02g080910.2.1	Tomato	extracellular	68.1	33.47
CDY70492	Canola	endoplasmic reticulum, extracellular	1.34	9.09
CDX96858	Canola	mitochondrion, nucleus	0.54	1.32
CDX81635	Canola	mitochondrion, nucleus	0.54	1.32
CDY09355	Canola	mitochondrion, nucleus	0.54	1.32
CDY41678	Canola	mitochondrion, nucleus	0.54	1.32
CDY45199	Canola	mitochondrion, nucleus	0.54	1.32
CDY45253	Canola	mitochondrion, nucleus	0.54	1.32
CDY53553	Canola	mitochondrion, nucleus	0.54	1.32
CDY66531	Canola	mitochondrion, nucleus	0.54	1.32

Protein Annotations

KEGG:00040+4.2.2.2	EntrezGene:100799106	Gene3D:2.160.20.10	MapMan:21.3.5.2	EMBL:ACUP02009212	InterPro:AmbAllergen
EnsemblPlantsGene:GLYMA_15G110500	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005975	GO:GO:0008150
GO:GO:0008152	GO:GO:0009056	GO:GO:0009987	GO:GO:0016829	GO:GO:0030570	GO:GO:0045490
GO:GO:0046872	UniProt:I1MFJ5	InterPro:IPR012334	EnsemblPlants:KRH11474	ProteinID:KRH11474	ProteinID:KRH11474.1
PFAM:PF00544	PRINTS:PR00807	PANTHER:PTHR31683	PANTHER:PTHR31683:SF18	InterPro:Pec_lyase	InterPro:Pectin_lyas_fold
InterPro:Pectin_lyase_fold/virulence	SMART:SM00656	SUPFAM:SSF51126	SignalP:SignalP-noTM	UniParc:UPI000233BFF8	SEG:seg

Description

hypothetical protein

Coordinates

chr15:-:8672846..8674609

Molecular Weight (calculated)

40770.9 Da

IEP (calculated)

9.363

GRAVY (calculated)

-0.141

Length

373 amino acids

Sequence
(BLAST)

001: MATSPTLLLL SCFILHLAYS TESAVLNKID SCWRAKSNWA SNRQALANCG IGFGKDSIGG KYGSIYKVTD PSDDPISPKP GTLRYGVIQT QPLWIIFAKD
101: MVIRLDNELI MNSYKTIDGR GAKVEIANGP CITIQGVSHV IIHGISIHDC KPSKAGLVRS TPSHLGHRRG SDGDGISIFA SSNIWIDHCF LARCADGLID
201: VIHASTSITI SNNYFTQHDK VMLLGHSDEY TADKKMKVTI AFNRFASGLI ERMPRVRFGY AHVVNNKYDG WKMYAIGGSS NPTILSEGNY YVAPNNPATK
301: QVTKREMKGK LKNWKWRSSK DAFLNGAYFV PSGYGSCDPN YSPTQYFTAV PASLVPAITL NAGPLTCVVG KAC

Best Arabidopsis Sequence Match ( AT1G11920.1 )
(BLAST)

001: MASLFLTIIS LLFAAFSSSV VEAAYSNGYT IPKLLPNPID SCWRRNPYWA SNRRALADCA VGFGKSAVGG KYGSIYVVTN PSDDPENPRP GTLRYAVIQS
101: KPLWITFARD MVIVLRNELI MNSYKTIDGR GAKVEIAYGP CITIQHVSHV IIHGISIHDC KPGKSGRVRS SPTHVGSRKG SDGDAIAIFD SSHIWIDHCF
201: FSRCQDGLID VLHASTAVTI SNNYFTQHDK VMLLGHNDNN VEDKIMRVTI AFNHFGPGLI ERMPRVRRGY AHVANNRYEK WQMYAIGGSA DPTIFSEGNY
301: FVASDDPSKK QVTKRIDSGY DWKRWKWRTS KDVFKNGAYF VPSGYGTVTP LYGRAERFPV SHGSLVPLLT SSAGPLHCYS GRIC

Arabidopsis Description

Putative pectate lyase 2 [Source:UniProtKB/Swiss-Prot;Acc:O65388]
SUBAcon: [endoplasmic reticulum,extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.