Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 8
- endoplasmic reticulum 5
- vacuole 5
- plasma membrane 6
- golgi 5
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH35994 | Soybean | extracellular | 93.82 | 93.45 |
| HORVU5Hr1G005000.2 | Barley | cytosol | 49.8 | 73.31 |
| VIT_13s0019g04910.t01 | Wine grape | extracellular | 70.72 | 71.57 |
| PGSC0003DMT400011046 | Potato | mitochondrion | 40.84 | 70.45 |
| Solyc11g008140.1.1 | Tomato | plasma membrane | 61.55 | 68.82 |
| PGSC0003DMT400079776 | Potato | plasma membrane | 66.73 | 68.37 |
| Solyc03g071570.2.1 | Tomato | endoplasmic reticulum, plasma membrane, vacuole | 66.14 | 65.87 |
| KRH67761 | Soybean | endoplasmic reticulum, extracellular, vacuole | 60.76 | 64.89 |
| Solyc05g055510.2.1 | Tomato | plasma membrane | 63.55 | 64.57 |
| CDX70244 | Canola | vacuole | 56.18 | 63.95 |
| KRH19954 | Soybean | endoplasmic reticulum, extracellular, plasma membrane | 60.76 | 63.94 |
| Bra003200.1-P | Field mustard | endoplasmic reticulum, extracellular | 61.35 | 62.73 |
| CDX67615 | Canola | endoplasmic reticulum, extracellular, vacuole | 61.16 | 62.53 |
| CDY07515 | Canola | endoplasmic reticulum, extracellular, vacuole | 61.16 | 62.4 |
| CDY11284 | Canola | extracellular, golgi | 63.35 | 62.35 |
| KRH58231 | Soybean | extracellular | 49.8 | 61.88 |
| Bra005799.1-P | Field mustard | extracellular, golgi | 62.75 | 61.52 |
| Bra007116.1-P | Field mustard | endoplasmic reticulum, extracellular | 59.96 | 61.43 |
| KRH03893 | Soybean | nucleus | 49.6 | 61.33 |
| CDY56964 | Canola | endoplasmic reticulum, extracellular, vacuole | 59.76 | 60.98 |
| KRG93976 | Soybean | extracellular | 49.0 | 60.89 |
| AT3G54920.1 | Thale cress | extracellular | 60.76 | 60.88 |
| KRH57176 | Soybean | nucleus | 49.2 | 60.84 |
| AT5G04310.1 | Thale cress | plasma membrane | 62.75 | 60.81 |
| CDY58428 | Canola | endoplasmic reticulum, golgi, plastid | 62.35 | 60.78 |
| KRH54276 | Soybean | endoplasmic reticulum, golgi, vacuole | 49.0 | 60.29 |
| CDY41382 | Canola | endoplasmic reticulum, golgi | 63.15 | 60.15 |
| KRH63675 | Soybean | endoplasmic reticulum, extracellular, vacuole | 48.61 | 59.8 |
| KRH31375 | Soybean | nucleus | 47.81 | 59.7 |
| Bra009469.1-P | Field mustard | extracellular, plastid, vacuole | 62.15 | 59.54 |
| CDX73426 | Canola | endoplasmic reticulum, extracellular, vacuole | 60.16 | 58.41 |
| KRG97506 | Soybean | endoplasmic reticulum, golgi | 47.01 | 58.27 |
| PGSC0003DMT400060374 | Potato | extracellular, plasma membrane, vacuole | 64.34 | 56.57 |
| KRG97507 | Soybean | endoplasmic reticulum, extracellular | 43.23 | 55.36 |
| KRH31373 | Soybean | extracellular | 40.44 | 54.72 |
| KRG90246 | Soybean | nucleus | 48.8 | 54.69 |
| KRH33474 | Soybean | nucleus | 49.0 | 54.67 |
| KRH46795 | Soybean | nucleus | 47.81 | 53.22 |
| KRH11474 | Soybean | extracellular | 39.44 | 53.08 |
| KRG99852 | Soybean | nucleus | 47.61 | 52.99 |
| KRH02031 | Soybean | extracellular | 41.24 | 52.01 |
| KRH36487 | Soybean | extracellular | 28.49 | 50.18 |
| KRH36488 | Soybean | extracellular | 38.65 | 48.87 |
| KRH54508 | Soybean | extracellular | 31.87 | 48.05 |
| KRH45851 | Soybean | extracellular | 42.23 | 47.01 |
| KRH63402 | Soybean | extracellular | 40.24 | 46.44 |
| KRH01130 | Soybean | extracellular | 39.24 | 44.77 |
| KRG93502 | Soybean | extracellular | 39.44 | 44.7 |
| KRH69345 | Soybean | extracellular | 39.64 | 44.52 |
| KRH18498 | Soybean | endoplasmic reticulum, extracellular, vacuole | 39.04 | 44.24 |
| KRH74782 | Soybean | extracellular | 39.44 | 44.2 |
Protein Annotations
| KEGG:00040+4.2.2.2 | EntrezGene:100808438 | Gene3D:2.160.20.10 | MapMan:21.3.5.2 | EMBL:ACUP02012640 | InterPro:AmbAllergen |
| EnsemblPlantsGene:GLYMA_20G112600 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005975 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009056 | GO:GO:0009987 | GO:GO:0016829 | GO:GO:0030570 | GO:GO:0045490 |
| GO:GO:0046872 | UniProt:I1NFF3 | InterPro:IPR012334 | EnsemblPlants:KRG90767 | ProteinID:KRG90767 | ProteinID:KRG90767.1 |
| PFAM:PF00544 | PRINTS:PR00807 | PANTHER:PTHR31683 | PANTHER:PTHR31683:SF11 | InterPro:Pec_lyase | InterPro:Pectin_lyas_fold |
| InterPro:Pectin_lyase_fold/virulence | SMART:SM00656 | SUPFAM:SSF51126 | SignalP:SignalP-noTM | UniParc:UPI000233DBD4 | SEG:seg |
Description
hypothetical protein
Coordinates
chr20:+:35467598..35472890
Molecular Weight (calculated)
54760.6 Da
IEP (calculated)
6.272
GRAVY (calculated)
-0.223
Length
502 amino acids
Sequence
(BLAST)
(BLAST)
001: MLHITCILLM CLLSSFSPPI NALLNLTLPH QHPHPESVVH DLQRKVNASL WRREMLSKED QQEGMSSSSC LTGNPIDDCW RCDPNWAADR QKLAECGLGF
101: GKYAMGGKGG QIYIVTDSSD RDPANPVPGT LRHAVIQDEP LWIVFAADMT INLKHELIFN SYKTLDGRGA NVHVTGHGCI TLQYVSNIII HNIHVHHCTP
201: SGNTNIRASP THVGWRGKSD GDGISIFGSR KIWIDHCSLS YCTDGLIDAI MGSTGITISN SHFAHHDEVM LLGHDDKYLP DRGMQVTIAF NHFGEGLVQR
301: MPRCRLGYIH VVNNDFTQWK MYAIGGSANP TINSQGNRYT APADPDAKEV TKRVDTDDRE WSGWNWRTEG DIMVNGAFFV PSGAGQSAQY AEATSVQAKS
401: AVQIDQLTMY SGVFGDPRDN GDLYPGFNGG GTVTGATSKG NTEGSSSDDG DFFGMIFRGS SSSQAAPPSP SSSIVFVSTF LSLLIIFILD TTTNHAILLS
501: LL
101: GKYAMGGKGG QIYIVTDSSD RDPANPVPGT LRHAVIQDEP LWIVFAADMT INLKHELIFN SYKTLDGRGA NVHVTGHGCI TLQYVSNIII HNIHVHHCTP
201: SGNTNIRASP THVGWRGKSD GDGISIFGSR KIWIDHCSLS YCTDGLIDAI MGSTGITISN SHFAHHDEVM LLGHDDKYLP DRGMQVTIAF NHFGEGLVQR
301: MPRCRLGYIH VVNNDFTQWK MYAIGGSANP TINSQGNRYT APADPDAKEV TKRVDTDDRE WSGWNWRTEG DIMVNGAFFV PSGAGQSAQY AEATSVQAKS
401: AVQIDQLTMY SGVFGDPRDN GDLYPGFNGG GTVTGATSKG NTEGSSSDDG DFFGMIFRGS SSSQAAPPSP SSSIVFVSTF LSLLIIFILD TTTNHAILLS
501: LL
001: MVAHERRIHN LQKPTCICII WFCLLVSLSH HGRASSTSAS IFNLSLPHQH PFPEHVVLNV QRKLNDSLSR RQLLTYQQDD GTTASSPIPS CITGNPIDDC
101: WRCDPNWSAN RQRLADCSIG FGQGTLGGKG GQFYLVTDSS DNDAANPIPG TLRHAVIQPE PLWIIFSSDM GIKLKHELII GSYKTIDGRG TNIQITGHGC
201: LTIQQVSHVI IHNVHIHHCK PSGNTLVASS PTHVGFRGVS DGDGISVSAS HHIWVDHCSL GYCADGLIDV ILASTAVTIS NNYFSHHDEV MLLGHDDRYT
301: ADKGMQVTIA FNHFGEGLVQ RMPRCRHGYI HVVNNDFTAW EMYAIGGSAS PTINSQGNRY TAPIDPNAKE VTKRVDSNEK HWSGWNWRTE GDVMVNGAFF
401: VPSGDGVSPA YARATSVQPK AAAIIDQLTV NAGVFGDPSG RNGQGGSFPG ITNGGGTITR GYSKSGPAGG GSGSDSDDGL FTLIFGNNSG AVALRPGQVW
501: SILLIIILYW YIPHHTRS
101: WRCDPNWSAN RQRLADCSIG FGQGTLGGKG GQFYLVTDSS DNDAANPIPG TLRHAVIQPE PLWIIFSSDM GIKLKHELII GSYKTIDGRG TNIQITGHGC
201: LTIQQVSHVI IHNVHIHHCK PSGNTLVASS PTHVGFRGVS DGDGISVSAS HHIWVDHCSL GYCADGLIDV ILASTAVTIS NNYFSHHDEV MLLGHDDRYT
301: ADKGMQVTIA FNHFGEGLVQ RMPRCRHGYI HVVNNDFTAW EMYAIGGSAS PTINSQGNRY TAPIDPNAKE VTKRVDSNEK HWSGWNWRTE GDVMVNGAFF
401: VPSGDGVSPA YARATSVQPK AAAIIDQLTV NAGVFGDPSG RNGQGGSFPG ITNGGGTITR GYSKSGPAGG GSGSDSDDGL FTLIFGNNSG AVALRPGQVW
501: SILLIIILYW YIPHHTRS
Arabidopsis Description
Pectate lyase [Source:UniProtKB/TrEMBL;Acc:F4JW80]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.