Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY47837 | Canola | nucleus | 89.76 | 89.76 |
| AT1G64570.1 | Thale cress | nucleus | 62.99 | 59.08 |
| CDX79498 | Canola | nucleus | 21.34 | 54.39 |
| GSMUA_Achr10P... | Banana | nucleus | 6.71 | 35.29 |
| KRH20856 | Soybean | nucleus | 37.95 | 31.37 |
| KRH11430 | Soybean | nucleus | 37.69 | 31.22 |
| KXG19518 | Sorghum | nucleus | 32.19 | 31.06 |
| Zm00001d020204_P009 | Maize | nucleus | 32.01 | 30.57 |
| EER96624 | Sorghum | nucleus | 31.93 | 30.19 |
| HORVU7Hr1G031870.4 | Barley | mitochondrion | 31.5 | 29.66 |
| TraesCS7A01G156000.1 | Wheat | nucleus | 31.5 | 29.59 |
| TraesCS7D01G156400.1 | Wheat | nucleus | 31.33 | 29.47 |
| TraesCS7B01G060100.6 | Wheat | nucleus | 30.64 | 29.23 |
| GSMUA_Achr3P32530_001 | Banana | nucleus | 32.1 | 28.05 |
| Os03t0672700-01 | Rice | cytosol, nucleus | 4.04 | 25.0 |
| VIT_10s0116g01740.t01 | Wine grape | cytosol | 40.53 | 24.84 |
| Solyc06g072270.2.1 | Tomato | nucleus | 37.35 | 24.45 |
Protein Annotations
| EnsemblPlants:CDY08384 | EnsemblPlantsGene:GSBRNA2T00000119001 | ncoils:Coil | PANTHER:PTHR11693 | PANTHER:PTHR11693:SF24 | ProteinID:CDY08384 |
| ProteinID:CDY08384.1 | SEG:seg | UniParc:UPI0004EE294C | UniProt:A0A078F5R3 | MapMan:35.2 | : |
Description
BnaC09g12120DBnaC09g12120D protein [Source:UniProtKB/TrEMBL;Acc:A0A078F5R3]
Coordinates
chrLK031985:+:801217..806057
Molecular Weight (calculated)
128887.0 Da
IEP (calculated)
4.882
GRAVY (calculated)
-0.680
Length
1162 amino acids
Sequence
(BLAST)
(BLAST)
0001: MDRLEETLIS EEEEEEEDVD FNPLLKETPS REASSSLSSD VETLDAEPVN SIAPSLDGGV REEAAKEEIA AVQVESIPNV SPPQGSKEEE EDDAICKRTR
0101: ARYSLESFTL DDLEAFLQET DDEDDIPNVD DQEEYRKFLA AVLHSGDAPE VHSVHDDDED NDLDFEIELE EALETDDDEP IPEKTTADGV TKQRRVTRQK
0201: RKQSISRIDD SPEQAARLLR PILPVVQPVR MLLPAAPESL ASSSVNSKGI GFTQSQIGEL HCLIQDHLQL LIQVYSLCAL DYSRQQIGTQ VQGLISEMIQ
0301: QHQGYVSRQS HLLVSRSASS VMNTVNLAGR YLADVSTAVQ DYRRCQVESG FDALSQRMPL FPLPLQHINN PPSMSLSHQQ QCKKTLAATI VESAKKESVA
0401: LVHKDIAKLA KTFLPLFKVS LYPHKPPAAA VSNRFLFTDA EDELLALGIM EYNSDWKAIK QRFLPCKGEH QIHIRQKNRR SSKAPDNPIK AVLRMKSSPL
0501: TPQEIERIEE GLRYFKFDWI SVWKFIVPYR DPSTLPRQWR TALGIQKSYK LDDVKKEKRR LSDSKKRMSR EQPASTKEDR HGASKANENH VGHELVENSG
0601: DTYLHEGFLA DWRPGMPTLF CSTSMHSFGN AKNVPRNQPV QICTGEGSKT AQILTDTRML APGTSRAPII MHSYHRARKL RNRSVVRLAP DLPPLNLPSS
0701: VRVISQSAFA KNQSVTSSKI CTTKGGMSSD SGKGVLATEP PCLSADGDSN APPSEKDLPA ESSSGMGETD NDSDLQMHPL LFRTPEHGQI SCYPSNRDKG
0801: GSSAFSFFSD NRPQLLSLFS SPRQINHSAD QFQKKASSND HEPALGDSCF HPLLQRTEGE TSYLTSGRGN LDTNIGKKRK LCQDTSSAVE KTCIPGTARN
0901: DVILKSVSSN KHDKNVNSDI NLSPRSSKVR DRGSVSAANI SEFADNSMNQ REDGAEMPGS TATSDRCIDE MGDQSNLGIV MEQEELSDSD EETMEEEHVE
1001: FECEEMADSE GEEGSECEEI IEMQDKDYRS SAVEVASTDV GSGKELGRDS PSSPWLSLDP SSRPSCSKIT QKEDTNKEQR CRIKGRRRCC SVETGSSFAL
1101: PSVKKPRKCV EEAETSPSVL HVKQVVGGNT TALQCVLNTD IETAMLLEEE TQIPAKQIES TT
0101: ARYSLESFTL DDLEAFLQET DDEDDIPNVD DQEEYRKFLA AVLHSGDAPE VHSVHDDDED NDLDFEIELE EALETDDDEP IPEKTTADGV TKQRRVTRQK
0201: RKQSISRIDD SPEQAARLLR PILPVVQPVR MLLPAAPESL ASSSVNSKGI GFTQSQIGEL HCLIQDHLQL LIQVYSLCAL DYSRQQIGTQ VQGLISEMIQ
0301: QHQGYVSRQS HLLVSRSASS VMNTVNLAGR YLADVSTAVQ DYRRCQVESG FDALSQRMPL FPLPLQHINN PPSMSLSHQQ QCKKTLAATI VESAKKESVA
0401: LVHKDIAKLA KTFLPLFKVS LYPHKPPAAA VSNRFLFTDA EDELLALGIM EYNSDWKAIK QRFLPCKGEH QIHIRQKNRR SSKAPDNPIK AVLRMKSSPL
0501: TPQEIERIEE GLRYFKFDWI SVWKFIVPYR DPSTLPRQWR TALGIQKSYK LDDVKKEKRR LSDSKKRMSR EQPASTKEDR HGASKANENH VGHELVENSG
0601: DTYLHEGFLA DWRPGMPTLF CSTSMHSFGN AKNVPRNQPV QICTGEGSKT AQILTDTRML APGTSRAPII MHSYHRARKL RNRSVVRLAP DLPPLNLPSS
0701: VRVISQSAFA KNQSVTSSKI CTTKGGMSSD SGKGVLATEP PCLSADGDSN APPSEKDLPA ESSSGMGETD NDSDLQMHPL LFRTPEHGQI SCYPSNRDKG
0801: GSSAFSFFSD NRPQLLSLFS SPRQINHSAD QFQKKASSND HEPALGDSCF HPLLQRTEGE TSYLTSGRGN LDTNIGKKRK LCQDTSSAVE KTCIPGTARN
0901: DVILKSVSSN KHDKNVNSDI NLSPRSSKVR DRGSVSAANI SEFADNSMNQ REDGAEMPGS TATSDRCIDE MGDQSNLGIV MEQEELSDSD EETMEEEHVE
1001: FECEEMADSE GEEGSECEEI IEMQDKDYRS SAVEVASTDV GSGKELGRDS PSSPWLSLDP SSRPSCSKIT QKEDTNKEQR CRIKGRRRCC SVETGSSFAL
1101: PSVKKPRKCV EEAETSPSVL HVKQVVGGNT TALQCVLNTD IETAMLLEEE TQIPAKQIES TT
0001: MKSLDQVETL ISGPPSEPSS PNRDLDKDEE EEEECEYDDE EEDVDFNPFL KDSPSREASS SLSSEVETLD GEIVNSITTV PQTLEGRQGK EDIAMPSNDV
0101: SCQEPPIPDE RTVGAANENG EQLVIQTQKQ DLMSTEEDDA ICKRTRARYS LASFTLDDLE AFLQETDDED DIPNVDDEEE YRKFLAAVLH SGDTEVPLAQ
0201: TGTNDDDDDD DEDNDLDFEI ELEEALETDD EEIIPEKVTT GDNISTKRRP VTRQKRRQNI SIHHKNNSPE QAGRLLRPLV PILPIAPPGR RVSATEAVAS
0301: SENRTINGFT QAQMGELHSL IHDHLQLLIQ VYSLCALDHS RQSIGTHVQG LLSEMLKQHQ GYISRRSHLL VTGSASSVLD VVGLAGRYLV DVSDAVQDYR
0401: RCQVESGFDT SSQRVPLFTL PHQEVGGEIV NYPLSSPSSS KSPSGQQQAK KTLAATLVES AQKQSVALVH KDIAKLAKRF MPLFKVSLYP HKPPHAAVAN
0501: RVLFTDAEDE LLALGIMEYN SDWKAIKQRF LPSKGEHQIY VRQKNRRSSK APENPIKAVL RMKSSPLTPQ EILRIQEGLK YFKYDWTSVW KFVVPYRDPS
0601: LLPRQWRTAL GIQKSYKLDA VKKEKRRLYD TNRKFREQQA SAKEDRYGAS KANEYHVGGE LVESSGEAYL HEGFLADWRP GMPTFFSSAP MHSFDKAKDV
0701: PGDRHESVQT CIVEGSKNPE LCGAQILTCT QRLAPSFIPM YRHTSGTAPG ASKAPIIARP YRSRKVFNRS VVRLAPDLPP VNLPSSVRVI SQSVFAKNQS
0801: ETSSKTCIIN GGMSDVSGRG NFGIETPCFS ADRDNNGPPS EKVVDLQEDV PAESSSGMDK QSNDSDLQMH PLLFRTPEHG QITCYPANRD PGGSSFSFFS
0901: ENRPQLLSLF NSPKQINHSA DQLHRNSSSN EYETAQGDIC FHPLLQRTEY ETSYVISRRG NLDPDIGKKD KLCQLQDTSG AVEKTAIPVT GRNDVSLEPF
1001: SSSTPGKNVN LDIYLSTSSS KVNNGGSVSA ANISEAPDIC MAQLNDGSEV PGSAPPSDNI SRCIEEMADQ SNLGIVMEQE ELSDSDDEMM EEEHVEFECE
1101: EMADSEGEEG SECEENIEMQ DKDNRNSVVE ITSTDVDSGK ELGKDSPNSP WLSLDPSSRR LSSNVKDREK IEATNETTIS QFGPSRSRKK GTPVKSRDAE
1201: SKEEAGVARL RLGPLALPPM KKPRKCGGQA ETSPSIETT
0101: SCQEPPIPDE RTVGAANENG EQLVIQTQKQ DLMSTEEDDA ICKRTRARYS LASFTLDDLE AFLQETDDED DIPNVDDEEE YRKFLAAVLH SGDTEVPLAQ
0201: TGTNDDDDDD DEDNDLDFEI ELEEALETDD EEIIPEKVTT GDNISTKRRP VTRQKRRQNI SIHHKNNSPE QAGRLLRPLV PILPIAPPGR RVSATEAVAS
0301: SENRTINGFT QAQMGELHSL IHDHLQLLIQ VYSLCALDHS RQSIGTHVQG LLSEMLKQHQ GYISRRSHLL VTGSASSVLD VVGLAGRYLV DVSDAVQDYR
0401: RCQVESGFDT SSQRVPLFTL PHQEVGGEIV NYPLSSPSSS KSPSGQQQAK KTLAATLVES AQKQSVALVH KDIAKLAKRF MPLFKVSLYP HKPPHAAVAN
0501: RVLFTDAEDE LLALGIMEYN SDWKAIKQRF LPSKGEHQIY VRQKNRRSSK APENPIKAVL RMKSSPLTPQ EILRIQEGLK YFKYDWTSVW KFVVPYRDPS
0601: LLPRQWRTAL GIQKSYKLDA VKKEKRRLYD TNRKFREQQA SAKEDRYGAS KANEYHVGGE LVESSGEAYL HEGFLADWRP GMPTFFSSAP MHSFDKAKDV
0701: PGDRHESVQT CIVEGSKNPE LCGAQILTCT QRLAPSFIPM YRHTSGTAPG ASKAPIIARP YRSRKVFNRS VVRLAPDLPP VNLPSSVRVI SQSVFAKNQS
0801: ETSSKTCIIN GGMSDVSGRG NFGIETPCFS ADRDNNGPPS EKVVDLQEDV PAESSSGMDK QSNDSDLQMH PLLFRTPEHG QITCYPANRD PGGSSFSFFS
0901: ENRPQLLSLF NSPKQINHSA DQLHRNSSSN EYETAQGDIC FHPLLQRTEY ETSYVISRRG NLDPDIGKKD KLCQLQDTSG AVEKTAIPVT GRNDVSLEPF
1001: SSSTPGKNVN LDIYLSTSSS KVNNGGSVSA ANISEAPDIC MAQLNDGSEV PGSAPPSDNI SRCIEEMADQ SNLGIVMEQE ELSDSDDEMM EEEHVEFECE
1101: EMADSEGEEG SECEENIEMQ DKDNRNSVVE ITSTDVDSGK ELGKDSPNSP WLSLDPSSRR LSSNVKDREK IEATNETTIS QFGPSRSRKK GTPVKSRDAE
1201: SKEEAGVARL RLGPLALPPM KKPRKCGGQA ETSPSIETT
Arabidopsis Description
DUO3Homeodomain-like superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4I6S6]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.