Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- plastid 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH11430 | Soybean | nucleus | 34.44 | 46.54 |
| KRH20856 | Soybean | nucleus | 34.44 | 46.44 |
| CDX79498 | Canola | nucleus | 10.76 | 44.74 |
| GSMUA_Achr10P... | Banana | nucleus | 5.12 | 43.89 |
| CDY08384 | Canola | nucleus | 24.84 | 40.53 |
| CDY47837 | Canola | nucleus | 24.63 | 40.19 |
| AT1G64570.1 | Thale cress | nucleus | 26.05 | 39.87 |
| Bra027727.1-P | Field mustard | nucleus | 25.21 | 38.52 |
| GSMUA_Achr3P32530_001 | Banana | nucleus | 25.58 | 36.47 |
| Solyc06g072270.2.1 | Tomato | nucleus | 33.76 | 36.06 |
| Zm00001d020204_P009 | Maize | nucleus | 23.0 | 35.83 |
| KXG19518 | Sorghum | nucleus | 22.57 | 35.55 |
| EER96624 | Sorghum | nucleus | 22.89 | 35.31 |
| TraesCS7A01G156000.1 | Wheat | nucleus | 22.42 | 34.36 |
| TraesCS7D01G156400.1 | Wheat | nucleus | 22.31 | 34.25 |
| TraesCS7B01G060100.6 | Wheat | nucleus | 21.94 | 34.15 |
| HORVU7Hr1G031870.4 | Barley | mitochondrion | 21.99 | 33.79 |
| Os03t0672700-01 | Rice | cytosol, nucleus | 1.95 | 19.68 |
Protein Annotations
| MapMan:1.1.9.2.3 | EntrezGene:100247051 | wikigene:100247051 | EntrezGene:100264091 | wikigene:100264091 | InterPro:ATP_synth_F1_ATPase_gsu |
| InterPro:ATP_synth_F1_gsu | InterPro:ATP_synth_F1_gsu_CS | ProteinID:CCB48216 | ProteinID:CCB48216.1 | ncoils:Coil | UniProt:F6H7M1 |
| EMBL:FN595248 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003824 | GO:GO:0005215 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0006139 | GO:GO:0006810 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0015986 | GO:GO:0016020 |
| GO:GO:0016787 | GO:GO:0045261 | GO:GO:0046933 | GO:GO:0099132 | InterPro:Homeobox-like_sf | EntrezGene:LOC100247051 |
| wikigene:LOC100247051 | EntrezGene:LOC100264091 | wikigene:LOC100264091 | HAMAP:MF_00815 | PFAM:PF00231 | PRINTS:PR00126 |
| ScanProsite:PS00153 | PANTHER:PTHR11693 | PANTHER:PTHR11693:SF24 | SUPFAM:SSF46689 | SUPFAM:SSF52943 | TIGR:TC56163 |
| TIGR:TC68177 | TIGRFAMs:TIGR01146 | UniParc:UPI0002108D27 | ArrayExpress:VIT_10s0116g01740 | EnsemblPlantsGene:VIT_10s0116g01740 | EnsemblPlants:VIT_10s0116g01740.t01 |
| RefSeq:XP_002268966 | RefSeq:XP_002268966.1 | RefSeq:XP_002275015 | RefSeq:XP_002275015.1 | SEG:seg | : |
Description
No Description!
Coordinates
chr10:-:1013121..1025133
Molecular Weight (calculated)
210473.0 Da
IEP (calculated)
5.232
GRAVY (calculated)
-0.586
Length
1896 amino acids
Sequence
(BLAST)
(BLAST)
0001: MLERAQSKEV GCHSQHNAVP VIPKLSECDE SPLELVEDED EDEDVDFNPY LKESPSLEAS SSLSSEIEGP DTNVADSGGS TFVPVGPNLL SNLNMEVQEC
0101: AIGDSEHQEE SVMQAVVYPA GISENKADKI VSSRHKKRKS VLISQPETET ICEKENGSCS GTDVAHDAAI GALSDTTHSR KPIMDLDDED AICTRTRARY
0201: SLASFTLDEL ETFLQETDDD DDLQNVDDEE EYKKFLAAVL LGGDGDNQKI LGNENAEDED EDEDEDNDAD FEIEIEEALE SDLDENTRGG SQKEEHKATV
0301: RRPETRQNKR QKANAHDRKM LLGQAKRPLR PLLPIFPNVT IAPFPSFDGK NLMAETAPHH LSSSAHDGLV NGFTPHQIGQ LHCLIHEHVQ LLIQVFSLCA
0401: LEPSRQHIAS QVQGLLSEML HKRDQILSWR HVPYPTFCFR PPYIHPSILD EIPKNCPAQC TFESSQPDLQ KDCSSASNDL PPSDNMSPSR GRNELASNGH
0501: VNSFQIKASF WVPYVCDPVL SILDVAPLSL VRGYMDDIST AVREYQRQHV QGTCDSRFDR EPLFPFPSFQ SLAEASGEVS RGTMPPATNM ELVSSSSHQP
0601: PKKTLAAALV ESTKKQSVAL VHKEIVKLAQ KFFPLFNSAL FPHKPPPTPV ANRVLFTDSE DELLAMGLME YNSDWKAIQQ RFLPCKTKHQ IFVRQKNRCS
0701: SKAPDNPIKA VRRMKTSPLT AEEKERIQEG LRVFKLDWMS IWKFIVPHRD PSLLPRQWRI AHGIQKSYKK DTAKKEKRRL YELNRRKSKA AAGPIWETVS
0801: EKEEYQTENA VEEGKSGDDD MDNDDEAYVH EAFLADWRPG NTSLISSELP FSNVTEKYLH SDSPSQEGTH VREWTSIHGS GEFRPQNVHA LEFPAASNYF
0901: QNPHMFSHFP HVRNSTSSTM EPSQPVSDLT LKSSKSQFCL RPYRVRRNSS AHQVKLAPDL PPVNLPPSVR IISQSALKSY QSGVSSKISA TGGIGGTGTE
1001: NMVPRLSNIA KSGTSHSAKA RQNTSSPLKH NITDPHAQRS RALKDKFAME ERGIESDLHM HPLLFQASED GRLPYYPFNC SHGPSNSFSF FSGNQSQVNL
1101: SLFHNPHQAN PKVNSFYKSL KSKESTPSCG IDFHPLLQRS DDIDNDLVTS RPTGQLSFDL ESFRGKRAQL QNSFDAVLTE PRVNSAPPRS GTKPSCLDGI
1201: ENELDLEIHL SSTSKTEKVV GSTNVTENNQ RKSASTLNSG TAVEAQNSSS QYHQQSDHRP SVSSPLEVRG KLISGACALV LPSNDILDNI GDQSLPEIVM
1301: EQEELSDSDE EIGEHVEFEC EEMADSEGEE SSDSEQIVDL QDKVVPIVEM EKLVPDVDFD NEQCEPRRID NPQSNDCITK DSTSPVRLGS TGQERDTRCS
1401: SSWLSLNSCP PGCPPQAKAH CIQSSNEEGP DMKNQEPPRP NRSSRKTTPI PKYVAAQKQP MNMPPQLGQD SLAVIPVRKP RKRSGRTHPI SNLGMTVESS
1501: DQACNNELGS DQLQSSSSSL NHIIMSCSNL TMWVSSKPSL SDSSLLSFRS SLNPFQLPSH NSPTASPSKS VIQCGLRELR ERIDSVKNTQ KITEAMKLVA
1601: AAKVRRAQEA VVNGRPFSET LVEVLYNINE QLQTDDIDVP LTKVRPVKKV ALVVVTGDRG LCGGFNNAII KKAESRIAEL KDLGLDYTVI SVGKKGNSYF
1701: LRRPYIPVDK FLEGGSLPTA KEAQTIADDV FSLFVSEEVD KVELLYTKFV SLVKADPVIH TLLPLSPKGE ICDVNGKCVD AAEDEFFRLT TREGKLTVER
1801: DVIRTQTVEF SPILQFEQDP VQILDALLPL YLNSQILRAL QESLASELAA RMSAMSNATD NAVELKKNLS MVYNRQRQAK ITGEILEIVA GADALV
0101: AIGDSEHQEE SVMQAVVYPA GISENKADKI VSSRHKKRKS VLISQPETET ICEKENGSCS GTDVAHDAAI GALSDTTHSR KPIMDLDDED AICTRTRARY
0201: SLASFTLDEL ETFLQETDDD DDLQNVDDEE EYKKFLAAVL LGGDGDNQKI LGNENAEDED EDEDEDNDAD FEIEIEEALE SDLDENTRGG SQKEEHKATV
0301: RRPETRQNKR QKANAHDRKM LLGQAKRPLR PLLPIFPNVT IAPFPSFDGK NLMAETAPHH LSSSAHDGLV NGFTPHQIGQ LHCLIHEHVQ LLIQVFSLCA
0401: LEPSRQHIAS QVQGLLSEML HKRDQILSWR HVPYPTFCFR PPYIHPSILD EIPKNCPAQC TFESSQPDLQ KDCSSASNDL PPSDNMSPSR GRNELASNGH
0501: VNSFQIKASF WVPYVCDPVL SILDVAPLSL VRGYMDDIST AVREYQRQHV QGTCDSRFDR EPLFPFPSFQ SLAEASGEVS RGTMPPATNM ELVSSSSHQP
0601: PKKTLAAALV ESTKKQSVAL VHKEIVKLAQ KFFPLFNSAL FPHKPPPTPV ANRVLFTDSE DELLAMGLME YNSDWKAIQQ RFLPCKTKHQ IFVRQKNRCS
0701: SKAPDNPIKA VRRMKTSPLT AEEKERIQEG LRVFKLDWMS IWKFIVPHRD PSLLPRQWRI AHGIQKSYKK DTAKKEKRRL YELNRRKSKA AAGPIWETVS
0801: EKEEYQTENA VEEGKSGDDD MDNDDEAYVH EAFLADWRPG NTSLISSELP FSNVTEKYLH SDSPSQEGTH VREWTSIHGS GEFRPQNVHA LEFPAASNYF
0901: QNPHMFSHFP HVRNSTSSTM EPSQPVSDLT LKSSKSQFCL RPYRVRRNSS AHQVKLAPDL PPVNLPPSVR IISQSALKSY QSGVSSKISA TGGIGGTGTE
1001: NMVPRLSNIA KSGTSHSAKA RQNTSSPLKH NITDPHAQRS RALKDKFAME ERGIESDLHM HPLLFQASED GRLPYYPFNC SHGPSNSFSF FSGNQSQVNL
1101: SLFHNPHQAN PKVNSFYKSL KSKESTPSCG IDFHPLLQRS DDIDNDLVTS RPTGQLSFDL ESFRGKRAQL QNSFDAVLTE PRVNSAPPRS GTKPSCLDGI
1201: ENELDLEIHL SSTSKTEKVV GSTNVTENNQ RKSASTLNSG TAVEAQNSSS QYHQQSDHRP SVSSPLEVRG KLISGACALV LPSNDILDNI GDQSLPEIVM
1301: EQEELSDSDE EIGEHVEFEC EEMADSEGEE SSDSEQIVDL QDKVVPIVEM EKLVPDVDFD NEQCEPRRID NPQSNDCITK DSTSPVRLGS TGQERDTRCS
1401: SSWLSLNSCP PGCPPQAKAH CIQSSNEEGP DMKNQEPPRP NRSSRKTTPI PKYVAAQKQP MNMPPQLGQD SLAVIPVRKP RKRSGRTHPI SNLGMTVESS
1501: DQACNNELGS DQLQSSSSSL NHIIMSCSNL TMWVSSKPSL SDSSLLSFRS SLNPFQLPSH NSPTASPSKS VIQCGLRELR ERIDSVKNTQ KITEAMKLVA
1601: AAKVRRAQEA VVNGRPFSET LVEVLYNINE QLQTDDIDVP LTKVRPVKKV ALVVVTGDRG LCGGFNNAII KKAESRIAEL KDLGLDYTVI SVGKKGNSYF
1701: LRRPYIPVDK FLEGGSLPTA KEAQTIADDV FSLFVSEEVD KVELLYTKFV SLVKADPVIH TLLPLSPKGE ICDVNGKCVD AAEDEFFRLT TREGKLTVER
1801: DVIRTQTVEF SPILQFEQDP VQILDALLPL YLNSQILRAL QESLASELAA RMSAMSNATD NAVELKKNLS MVYNRQRQAK ITGEILEIVA GADALV
001: MACSNLTTMW VSSKPSLSAD SSSLSFRSVL KCPTNTSSPP SRASSVSPLQ ASLRELRDRI DSVKNTQKIT EAMKLVAAAK VRRAQEAVVN GRPFSETLVE
101: VLYNINEQLQ TDDVDVPLTK VRPVKKVALV VVTGDRGLCG GFNNFIIKKA EARIKELKGL GLEYTVISVG KKGNSYFLRR PYIPVDKYLE AGTLPTAKEA
201: QAVADDVFSL FISEEVDKVE LLYTKFVSLV KSEPVIHTLL PLSPKGEICD INGTCVDAAE DEFFRLTTKE GKLTVERETF RTPTADFSPI LQFEQDPVQI
301: LDALLPLYLN SQILRALQES LASELAARMS AMSSASDNAS DLKKSLSMVY NRKRQAKITG EILEIVAGAN AQV
101: VLYNINEQLQ TDDVDVPLTK VRPVKKVALV VVTGDRGLCG GFNNFIIKKA EARIKELKGL GLEYTVISVG KKGNSYFLRR PYIPVDKYLE AGTLPTAKEA
201: QAVADDVFSL FISEEVDKVE LLYTKFVSLV KSEPVIHTLL PLSPKGEICD INGTCVDAAE DEFFRLTTKE GKLTVERETF RTPTADFSPI LQFEQDPVQI
301: LDALLPLYLN SQILRALQES LASELAARMS AMSSASDNAS DLKKSLSMVY NRKRQAKITG EILEIVAGAN AQV
Arabidopsis Description
ATPC1ATP synthase gamma chain 1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q01908]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.