Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX79498 | Canola | nucleus | 10.65 | 41.45 |
| GSMUA_Achr10P... | Banana | nucleus | 4.9 | 39.37 |
| KRH11430 | Soybean | nucleus | 31.1 | 39.34 |
| KRH20856 | Soybean | nucleus | 30.99 | 39.12 |
| CDY47837 | Canola | nucleus | 24.73 | 37.78 |
| CDY08384 | Canola | nucleus | 24.45 | 37.35 |
| AT1G64570.1 | Thale cress | nucleus | 25.92 | 37.13 |
| Bra027727.1-P | Field mustard | nucleus | 25.35 | 36.26 |
| Zm00001d020204_P009 | Maize | nucleus | 23.89 | 34.84 |
| KXG19518 | Sorghum | nucleus | 23.49 | 34.63 |
| TraesCS7A01G156000.1 | Wheat | nucleus | 23.83 | 34.2 |
| HORVU7Hr1G031870.4 | Barley | mitochondrion | 23.72 | 34.12 |
| EER96624 | Sorghum | nucleus | 23.61 | 34.09 |
| TraesCS7D01G156400.1 | Wheat | nucleus | 23.72 | 34.09 |
| VIT_10s0116g01740.t01 | Wine grape | cytosol | 36.06 | 33.76 |
| TraesCS7B01G060100.6 | Wheat | nucleus | 23.1 | 33.66 |
| GSMUA_Achr3P32530_001 | Banana | nucleus | 25.07 | 33.46 |
| Os03t0672700-01 | Rice | cytosol, nucleus | 2.25 | 21.28 |
Protein Annotations
| EnsemblPlants:Solyc06g072270.2.1 | EnsemblPlantsGene:Solyc06g072270.2 | Gene3D:3.30.40.10 | InterPro:IPR001841 | InterPro:IPR013083 | InterPro:Znf_RING |
| InterPro:Znf_RING/FYVE/PHD | PANTHER:PTHR11693 | PANTHER:PTHR11693:SF24 | PFAM:PF13639 | PFAM:PF14369 | PFscan:PS50089 |
| SEG:seg | SMART:SM00184 | SUPFAM:SSF57850 | UniParc:UPI000276578A | UniProt:K4C8U7 | MapMan:35.1 |
Description
No Description!
Coordinates
chr6:-:44550877..44561200
Molecular Weight (calculated)
194692.0 Da
IEP (calculated)
4.695
GRAVY (calculated)
-0.714
Length
1775 amino acids
Sequence
(BLAST)
(BLAST)
0001: MSLSSTALST DVKESNQENL FMVRGNLSND GSPREQEADE EKSEHLHGDC DRGDNENAYD EDEEEDMDFN PLLKETASLD ASSSLSSEIE GLDADAVDSG
0101: QNIDESLRVC CEERLPDFSQ DCLIGDKELG EEIVMRNRAS SAACPEDLRK ISPSEPKERD STLDTEPESG ISNSKKTVLN GGGDHFEDLS VGGCNNIANS
0201: GRSIIDMDNE DAICKRTRAR YSLASFTLDE LETFLQETDD EDDLQNVNDE EEYRKFLAAV LHGGDGNSGN IQDNENVDDE DEDNDADFEL EIEEALESDL
0301: DEHLKDDIEE YEAVGRRPKT RQTRRQRSSL ENKNKILGLS DRPLRPLLPY LPSSPYSVHG AKGMMPPSSL LPANDGFVNG FTPHQIGQLH CLIHEHVQLL
0401: IQVFAVCVLE PAKRHIASNV GELISQMLRK RDEVLANRSV PYPSFCFFSP YVCPSVSDEP LHISPFQITN KISSAHDLQR GFTNNQVGCP LGSWVPHING
0501: PILSVLDVAP IKLVKDFMDD VSHAVQDYQC RQVGGLNDSC SEKKPLFPVQ NIHFTAEPDG RASLYSNSVP PSSSISQKSK KTLAAVLVEK AKQQAVASVP
0601: NEIAKLAQRF YPLFNPALYP HKPPPAMVAN RVLFTDAEDE LLALGLMEYN TDWKAIQQRY LPCKSKHQIF VRQKNRSSSK APDNPIKAVR RMKNSPLTAE
0701: EVARIEEGLK VFKLDWMSVW KFIVPYRDPS LLPRQWRTAI GTQKSYISDA SKKAKRRLYE SERKKLKSGA SETWHISSRK KDDVADSAIE GNCGADNCTD
0801: RNEEAYVHEA FLADWRPSVS SIQVNHSMSN LAEKIPPLQL LGVESSQVAE KMNNSGSRNW QSHISNEFPV SRRSSETESF SRGNGTRKFN NGQLVKLAPG
0901: LPPVNLPPSV RVMSQSAFKS YHVGTCPRAF GGDASTGDGV RDNAVPKTAN AAKPCTNYFV KDGPLSSSAG RNNISNQNLQ ETRLSKDNKN VTEEKDESGL
1001: RMHPLLFRAP EDGPFPHYQS NSSFSTSSSF NFFSGCQPNL SLFHHPHQSA HTVNFLDKSS NPGDKTSMSS GFDFHPLLQR IDDANCDLEV ASTVTRPSCT
1101: SETSRGWCTQ VQNAVDSSSN VACAIPSSPM GKSNELDLEM HLSFTCSKQK AIGSRGVADR FMERSPTSAS RDQNPLNNGT PNRTTQHSDS GATARILSSD
1201: EETGNGVDDL EDQSLIEIVM EQEELSDSEE EIGESVEFEC EEMEDSEGEE IFESEEITND ENEEMDKVAL EDSYVQHVPY THGNSKGNSC SITESHATRF
1301: DKATDDQPSS LYLNSNPPRT VSSQVKSKSR HSSNSAGKPQ DPTCSKRSRK KTKRDRDHPT VPKCASDMPE QANQSSVASS PRNSRKRARG TDSRKTDTSV
1401: IADTNEESPN STKKDEMSSA GNTGGGEMAG NSALNYYCYG CQSTVPLPNS ELSCPNCNGT FVEESPSPDP VTGANPDSSF SFPTDSGNES DDEVSALFES
1501: GFGRSPVEVD PVTFMNRDGD GTIQLLLENN HENELPIIFG DFTVGRYLVQ LIRQLAVIDL NMNGTPPAAR SAVLGLPDVR VSDELLNSDL SQCAVCKDGF
1601: KLDEMVKQMP CKHMYHNDCI LPWLEMRNSC PVCRFELPTD DFAYEIRRRR NANNAGLLSR GLEGGGNQGT LDSNGGLLSV DAGNQGNGGT VESYGALFSM
1701: GAEVGGSRGN RGTVERRVRI SVPGLLRGLQ SHAETSSSTG GGGSNDGVKN DGDSSSSDDT HGEPNPHPGG HGQAN
0101: QNIDESLRVC CEERLPDFSQ DCLIGDKELG EEIVMRNRAS SAACPEDLRK ISPSEPKERD STLDTEPESG ISNSKKTVLN GGGDHFEDLS VGGCNNIANS
0201: GRSIIDMDNE DAICKRTRAR YSLASFTLDE LETFLQETDD EDDLQNVNDE EEYRKFLAAV LHGGDGNSGN IQDNENVDDE DEDNDADFEL EIEEALESDL
0301: DEHLKDDIEE YEAVGRRPKT RQTRRQRSSL ENKNKILGLS DRPLRPLLPY LPSSPYSVHG AKGMMPPSSL LPANDGFVNG FTPHQIGQLH CLIHEHVQLL
0401: IQVFAVCVLE PAKRHIASNV GELISQMLRK RDEVLANRSV PYPSFCFFSP YVCPSVSDEP LHISPFQITN KISSAHDLQR GFTNNQVGCP LGSWVPHING
0501: PILSVLDVAP IKLVKDFMDD VSHAVQDYQC RQVGGLNDSC SEKKPLFPVQ NIHFTAEPDG RASLYSNSVP PSSSISQKSK KTLAAVLVEK AKQQAVASVP
0601: NEIAKLAQRF YPLFNPALYP HKPPPAMVAN RVLFTDAEDE LLALGLMEYN TDWKAIQQRY LPCKSKHQIF VRQKNRSSSK APDNPIKAVR RMKNSPLTAE
0701: EVARIEEGLK VFKLDWMSVW KFIVPYRDPS LLPRQWRTAI GTQKSYISDA SKKAKRRLYE SERKKLKSGA SETWHISSRK KDDVADSAIE GNCGADNCTD
0801: RNEEAYVHEA FLADWRPSVS SIQVNHSMSN LAEKIPPLQL LGVESSQVAE KMNNSGSRNW QSHISNEFPV SRRSSETESF SRGNGTRKFN NGQLVKLAPG
0901: LPPVNLPPSV RVMSQSAFKS YHVGTCPRAF GGDASTGDGV RDNAVPKTAN AAKPCTNYFV KDGPLSSSAG RNNISNQNLQ ETRLSKDNKN VTEEKDESGL
1001: RMHPLLFRAP EDGPFPHYQS NSSFSTSSSF NFFSGCQPNL SLFHHPHQSA HTVNFLDKSS NPGDKTSMSS GFDFHPLLQR IDDANCDLEV ASTVTRPSCT
1101: SETSRGWCTQ VQNAVDSSSN VACAIPSSPM GKSNELDLEM HLSFTCSKQK AIGSRGVADR FMERSPTSAS RDQNPLNNGT PNRTTQHSDS GATARILSSD
1201: EETGNGVDDL EDQSLIEIVM EQEELSDSEE EIGESVEFEC EEMEDSEGEE IFESEEITND ENEEMDKVAL EDSYVQHVPY THGNSKGNSC SITESHATRF
1301: DKATDDQPSS LYLNSNPPRT VSSQVKSKSR HSSNSAGKPQ DPTCSKRSRK KTKRDRDHPT VPKCASDMPE QANQSSVASS PRNSRKRARG TDSRKTDTSV
1401: IADTNEESPN STKKDEMSSA GNTGGGEMAG NSALNYYCYG CQSTVPLPNS ELSCPNCNGT FVEESPSPDP VTGANPDSSF SFPTDSGNES DDEVSALFES
1501: GFGRSPVEVD PVTFMNRDGD GTIQLLLENN HENELPIIFG DFTVGRYLVQ LIRQLAVIDL NMNGTPPAAR SAVLGLPDVR VSDELLNSDL SQCAVCKDGF
1601: KLDEMVKQMP CKHMYHNDCI LPWLEMRNSC PVCRFELPTD DFAYEIRRRR NANNAGLLSR GLEGGGNQGT LDSNGGLLSV DAGNQGNGGT VESYGALFSM
1701: GAEVGGSRGN RGTVERRVRI SVPGLLRGLQ SHAETSSSTG GGGSNDGVKN DGDSSSSDDT HGEPNPHPGG HGQAN
0001: MKSLDQVETL ISGPPSEPSS PNRDLDKDEE EEEECEYDDE EEDVDFNPFL KDSPSREASS SLSSEVETLD GEIVNSITTV PQTLEGRQGK EDIAMPSNDV
0101: SCQEPPIPDE RTVGAANENG EQLVIQTQKQ DLMSTEEDDA ICKRTRARYS LASFTLDDLE AFLQETDDED DIPNVDDEEE YRKFLAAVLH SGDTEVPLAQ
0201: TGTNDDDDDD DEDNDLDFEI ELEEALETDD EEIIPEKVTT GDNISTKRRP VTRQKRRQNI SIHHKNNSPE QAGRLLRPLV PILPIAPPGR RVSATEAVAS
0301: SENRTINGFT QAQMGELHSL IHDHLQLLIQ VYSLCALDHS RQSIGTHVQG LLSEMLKQHQ GYISRRSHLL VTGSASSVLD VVGLAGRYLV DVSDAVQDYR
0401: RCQVESGFDT SSQRVPLFTL PHQEVGGEIV NYPLSSPSSS KSPSGQQQAK KTLAATLVES AQKQSVALVH KDIAKLAKRF MPLFKVSLYP HKPPHAAVAN
0501: RVLFTDAEDE LLALGIMEYN SDWKAIKQRF LPSKGEHQIY VRQKNRRSSK APENPIKAVL RMKSSPLTPQ EILRIQEGLK YFKYDWTSVW KFVVPYRDPS
0601: LLPRQWRTAL GIQKSYKLDA VKKEKRRLYD TNRKFREQQA SAKEDRYGAS KANEYHVGGE LVESSGEAYL HEGFLADWRP GMPTFFSSAP MHSFDKAKDV
0701: PGDRHESVQT CIVEGSKNPE LCGAQILTCT QRLAPSFIPM YRHTSGTAPG ASKAPIIARP YRSRKVFNRS VVRLAPDLPP VNLPSSVRVI SQSVFAKNQS
0801: ETSSKTCIIN GGMSDVSGRG NFGIETPCFS ADRDNNGPPS EKVVDLQEDV PAESSSGMDK QSNDSDLQMH PLLFRTPEHG QITCYPANRD PGGSSFSFFS
0901: ENRPQLLSLF NSPKQINHSA DQLHRNSSSN EYETAQGDIC FHPLLQRTEY ETSYVISRRG NLDPDIGKKD KLCQLQDTSG AVEKTAIPVT GRNDVSLEPF
1001: SSSTPGKNVN LDIYLSTSSS KVNNGGSVSA ANISEAPDIC MAQLNDGSEV PGSAPPSDNI SRCIEEMADQ SNLGIVMEQE ELSDSDDEMM EEEHVEFECE
1101: EMADSEGEEG SECEENIEMQ DKDNRNSVVE ITSTDVDSGK ELGKDSPNSP WLSLDPSSRR LSSNVKDREK IEATNETTIS QFGPSRSRKK GTPVKSRDAE
1201: SKEEAGVARL RLGPLALPPM KKPRKCGGQA ETSPSIETT
0101: SCQEPPIPDE RTVGAANENG EQLVIQTQKQ DLMSTEEDDA ICKRTRARYS LASFTLDDLE AFLQETDDED DIPNVDDEEE YRKFLAAVLH SGDTEVPLAQ
0201: TGTNDDDDDD DEDNDLDFEI ELEEALETDD EEIIPEKVTT GDNISTKRRP VTRQKRRQNI SIHHKNNSPE QAGRLLRPLV PILPIAPPGR RVSATEAVAS
0301: SENRTINGFT QAQMGELHSL IHDHLQLLIQ VYSLCALDHS RQSIGTHVQG LLSEMLKQHQ GYISRRSHLL VTGSASSVLD VVGLAGRYLV DVSDAVQDYR
0401: RCQVESGFDT SSQRVPLFTL PHQEVGGEIV NYPLSSPSSS KSPSGQQQAK KTLAATLVES AQKQSVALVH KDIAKLAKRF MPLFKVSLYP HKPPHAAVAN
0501: RVLFTDAEDE LLALGIMEYN SDWKAIKQRF LPSKGEHQIY VRQKNRRSSK APENPIKAVL RMKSSPLTPQ EILRIQEGLK YFKYDWTSVW KFVVPYRDPS
0601: LLPRQWRTAL GIQKSYKLDA VKKEKRRLYD TNRKFREQQA SAKEDRYGAS KANEYHVGGE LVESSGEAYL HEGFLADWRP GMPTFFSSAP MHSFDKAKDV
0701: PGDRHESVQT CIVEGSKNPE LCGAQILTCT QRLAPSFIPM YRHTSGTAPG ASKAPIIARP YRSRKVFNRS VVRLAPDLPP VNLPSSVRVI SQSVFAKNQS
0801: ETSSKTCIIN GGMSDVSGRG NFGIETPCFS ADRDNNGPPS EKVVDLQEDV PAESSSGMDK QSNDSDLQMH PLLFRTPEHG QITCYPANRD PGGSSFSFFS
0901: ENRPQLLSLF NSPKQINHSA DQLHRNSSSN EYETAQGDIC FHPLLQRTEY ETSYVISRRG NLDPDIGKKD KLCQLQDTSG AVEKTAIPVT GRNDVSLEPF
1001: SSSTPGKNVN LDIYLSTSSS KVNNGGSVSA ANISEAPDIC MAQLNDGSEV PGSAPPSDNI SRCIEEMADQ SNLGIVMEQE ELSDSDDEMM EEEHVEFECE
1101: EMADSEGEEG SECEENIEMQ DKDNRNSVVE ITSTDVDSGK ELGKDSPNSP WLSLDPSSRR LSSNVKDREK IEATNETTIS QFGPSRSRKK GTPVKSRDAE
1201: SKEEAGVARL RLGPLALPPM KKPRKCGGQA ETSPSIETT
Arabidopsis Description
DUO3Homeodomain-like superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4I6S6]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.