Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY47837 | Canola | nucleus | 55.26 | 21.69 |
| CDY08384 | Canola | nucleus | 54.39 | 21.34 |
| TraesCS7B01G060100.6 | Wheat | nucleus | 40.13 | 15.02 |
| TraesCS7D01G156400.1 | Wheat | nucleus | 40.35 | 14.9 |
| TraesCS7A01G156000.1 | Wheat | nucleus | 40.35 | 14.87 |
| HORVU7Hr1G031870.4 | Barley | mitochondrion | 39.91 | 14.75 |
| KXG19518 | Sorghum | nucleus | 37.94 | 14.37 |
| Os03t0672700-01 | Rice | cytosol, nucleus | 5.92 | 14.36 |
| Zm00001d020204_P009 | Maize | nucleus | 37.94 | 14.22 |
| EER96624 | Sorghum | nucleus | 37.28 | 13.83 |
| KRH11430 | Soybean | nucleus | 42.54 | 13.83 |
| KRH20856 | Soybean | nucleus | 42.54 | 13.8 |
| GSMUA_Achr3P32530_001 | Banana | nucleus | 34.43 | 11.8 |
| VIT_10s0116g01740.t01 | Wine grape | cytosol | 44.74 | 10.76 |
| Solyc06g072270.2.1 | Tomato | nucleus | 41.45 | 10.65 |
| GSMUA_Achr10P... | Banana | nucleus | 0.44 | 0.9 |
Protein Annotations
| EnsemblPlants:CDX79498 | EnsemblPlantsGene:GSBRNA2T00132245001 | PANTHER:PTHR11693 | PANTHER:PTHR11693:SF24 | ProteinID:CDX79498 | ProteinID:CDX79498.1 |
| SEG:seg | UniParc:UPI0004EE7D10 | MapMan:35.2 | : | : | : |
Description
BnaC03g18340D
Coordinates
chrLK031818:+:396646..398417
Molecular Weight (calculated)
51779.3 Da
IEP (calculated)
4.509
GRAVY (calculated)
-0.719
Length
456 amino acids
Sequence
(BLAST)
(BLAST)
001: MIKTHNQALM SKDNDDDEAI CKRTRASCSL ASSTLDDLEA FLHETDDDDE DEISNVDEEK EEYRKFLAAT VSHSCEVQDC DYDEDKDVDF EIQQALETDD
101: EEASIPRPVT RRKRRPKISN DCRSRSLRPL VPIFPITQPR TRFYAARMNG CFSQAQIREL HCLVLDHLQL LIQVYSLCAF DHSKQRIGAQ VQGLITEMVQ
201: KQQRPSHLLD LVGRYLVDVS TAVQEYRKRQ VESGFDSMFG RVPLFESGRK DPGTVHKDVA ELAQVFLPFF KVSLFPEKPP GGGKRSLFTS GEDELLALGI
301: MEYNSDWKAI KQRENDSGLL MHHFPREIDH SAELGDSCFH PFLRKSEYEM SRRENLEAGT GKNAKLCQLE DTLGAGDKTC IPVAGRNDGS HVTGSSATSR
401: CIDEIGDQSN QGIVMEHEEL SDSDQEMMEE EHVEFECEEM TDSQGENDSE CEEKSR
101: EEASIPRPVT RRKRRPKISN DCRSRSLRPL VPIFPITQPR TRFYAARMNG CFSQAQIREL HCLVLDHLQL LIQVYSLCAF DHSKQRIGAQ VQGLITEMVQ
201: KQQRPSHLLD LVGRYLVDVS TAVQEYRKRQ VESGFDSMFG RVPLFESGRK DPGTVHKDVA ELAQVFLPFF KVSLFPEKPP GGGKRSLFTS GEDELLALGI
301: MEYNSDWKAI KQRENDSGLL MHHFPREIDH SAELGDSCFH PFLRKSEYEM SRRENLEAGT GKNAKLCQLE DTLGAGDKTC IPVAGRNDGS HVTGSSATSR
401: CIDEIGDQSN QGIVMEHEEL SDSDQEMMEE EHVEFECEEM TDSQGENDSE CEEKSR
0001: MKSLDQVETL ISGPPSEPSS PNRDLDKDEE EEEECEYDDE EEDVDFNPFL KDSPSREASS SLSSEVETLD GEIVNSITTV PQTLEGRQGK EDIAMPSNDV
0101: SCQEPPIPDE RTVGAANENG EQLVIQTQKQ DLMSTEEDDA ICKRTRARYS LASFTLDDLE AFLQETDDED DIPNVDDEEE YRKFLAAVLH SGDTEVPLAQ
0201: TGTNDDDDDD DEDNDLDFEI ELEEALETDD EEIIPEKVTT GDNISTKRRP VTRQKRRQNI SIHHKNNSPE QAGRLLRPLV PILPIAPPGR RVSATEAVAS
0301: SENRTINGFT QAQMGELHSL IHDHLQLLIQ VYSLCALDHS RQSIGTHVQG LLSEMLKQHQ GYISRRSHLL VTGSASSVLD VVGLAGRYLV DVSDAVQDYR
0401: RCQVESGFDT SSQRVPLFTL PHQEVGGEIV NYPLSSPSSS KSPSGQQQAK KTLAATLVES AQKQSVALVH KDIAKLAKRF MPLFKVSLYP HKPPHAAVAN
0501: RVLFTDAEDE LLALGIMEYN SDWKAIKQRF LPSKGEHQIY VRQKNRRSSK APENPIKAVL RMKSSPLTPQ EILRIQEGLK YFKYDWTSVW KFVVPYRDPS
0601: LLPRQWRTAL GIQKSYKLDA VKKEKRRLYD TNRKFREQQA SAKEDRYGAS KANEYHVGGE LVESSGEAYL HEGFLADWRP GMPTFFSSAP MHSFDKAKDV
0701: PGDRHESVQT CIVEGSKNPE LCGAQILTCT QRLAPSFIPM YRHTSGTAPG ASKAPIIARP YRSRKVFNRS VVRLAPDLPP VNLPSSVRVI SQSVFAKNQS
0801: ETSSKTCIIN GGMSDVSGRG NFGIETPCFS ADRDNNGPPS EKVVDLQEDV PAESSSGMDK QSNDSDLQMH PLLFRTPEHG QITCYPANRD PGGSSFSFFS
0901: ENRPQLLSLF NSPKQINHSA DQLHRNSSSN EYETAQGDIC FHPLLQRTEY ETSYVISRRG NLDPDIGKKD KLCQLQDTSG AVEKTAIPVT GRNDVSLEPF
1001: SSSTPGKNVN LDIYLSTSSS KVNNGGSVSA ANISEAPDIC MAQLNDGSEV PGSAPPSDNI SRCIEEMADQ SNLGIVMEQE ELSDSDDEMM EEEHVEFECE
1101: EMADSEGEEG SECEENIEMQ DKDNRNSVVE ITSTDVDSGK ELGKDSPNSP WLSLDPSSRR LSSNVKDREK IEATNETTIS QFGPSRSRKK GTPVKSRDAE
1201: SKEEAGVARL RLGPLALPPM KKPRKCGGQA ETSPSIETT
0101: SCQEPPIPDE RTVGAANENG EQLVIQTQKQ DLMSTEEDDA ICKRTRARYS LASFTLDDLE AFLQETDDED DIPNVDDEEE YRKFLAAVLH SGDTEVPLAQ
0201: TGTNDDDDDD DEDNDLDFEI ELEEALETDD EEIIPEKVTT GDNISTKRRP VTRQKRRQNI SIHHKNNSPE QAGRLLRPLV PILPIAPPGR RVSATEAVAS
0301: SENRTINGFT QAQMGELHSL IHDHLQLLIQ VYSLCALDHS RQSIGTHVQG LLSEMLKQHQ GYISRRSHLL VTGSASSVLD VVGLAGRYLV DVSDAVQDYR
0401: RCQVESGFDT SSQRVPLFTL PHQEVGGEIV NYPLSSPSSS KSPSGQQQAK KTLAATLVES AQKQSVALVH KDIAKLAKRF MPLFKVSLYP HKPPHAAVAN
0501: RVLFTDAEDE LLALGIMEYN SDWKAIKQRF LPSKGEHQIY VRQKNRRSSK APENPIKAVL RMKSSPLTPQ EILRIQEGLK YFKYDWTSVW KFVVPYRDPS
0601: LLPRQWRTAL GIQKSYKLDA VKKEKRRLYD TNRKFREQQA SAKEDRYGAS KANEYHVGGE LVESSGEAYL HEGFLADWRP GMPTFFSSAP MHSFDKAKDV
0701: PGDRHESVQT CIVEGSKNPE LCGAQILTCT QRLAPSFIPM YRHTSGTAPG ASKAPIIARP YRSRKVFNRS VVRLAPDLPP VNLPSSVRVI SQSVFAKNQS
0801: ETSSKTCIIN GGMSDVSGRG NFGIETPCFS ADRDNNGPPS EKVVDLQEDV PAESSSGMDK QSNDSDLQMH PLLFRTPEHG QITCYPANRD PGGSSFSFFS
0901: ENRPQLLSLF NSPKQINHSA DQLHRNSSSN EYETAQGDIC FHPLLQRTEY ETSYVISRRG NLDPDIGKKD KLCQLQDTSG AVEKTAIPVT GRNDVSLEPF
1001: SSSTPGKNVN LDIYLSTSSS KVNNGGSVSA ANISEAPDIC MAQLNDGSEV PGSAPPSDNI SRCIEEMADQ SNLGIVMEQE ELSDSDDEMM EEEHVEFECE
1101: EMADSEGEEG SECEENIEMQ DKDNRNSVVE ITSTDVDSGK ELGKDSPNSP WLSLDPSSRR LSSNVKDREK IEATNETTIS QFGPSRSRKK GTPVKSRDAE
1201: SKEEAGVARL RLGPLALPPM KKPRKCGGQA ETSPSIETT
Arabidopsis Description
DUO3Homeodomain-like superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4I6S6]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.