Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 1
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7D01G156400.1 | Wheat | nucleus | 94.09 | 92.79 |
| TraesCS7A01G156000.1 | Wheat | nucleus | 93.19 | 91.75 |
| HORVU7Hr1G031870.4 | Barley | mitochondrion | 84.89 | 83.79 |
| KXG19518 | Sorghum | nucleus | 58.54 | 59.22 |
| EER96624 | Sorghum | nucleus | 59.36 | 58.83 |
| Zm00001d020204_P009 | Maize | nucleus | 58.62 | 58.67 |
| Os03t0672700-01 | Rice | cytosol, nucleus | 7.55 | 48.94 |
| GSMUA_Achr10P... | Banana | nucleus | 7.31 | 40.27 |
| CDX79498 | Canola | nucleus | 15.02 | 40.13 |
| GSMUA_Achr3P32530_001 | Banana | nucleus | 35.96 | 32.93 |
| CDY47837 | Canola | nucleus | 29.8 | 31.24 |
| CDY08384 | Canola | nucleus | 29.23 | 30.64 |
| AT1G64570.1 | Thale cress | nucleus | 30.62 | 30.1 |
| Bra027727.1-P | Field mustard | nucleus | 29.64 | 29.09 |
| KRH11430 | Soybean | nucleus | 32.59 | 28.3 |
| KRH20856 | Soybean | nucleus | 32.51 | 28.16 |
| Solyc06g072270.2.1 | Tomato | nucleus | 33.66 | 23.1 |
| VIT_10s0116g01740.t01 | Wine grape | cytosol | 34.15 | 21.94 |
Protein Annotations
| EnsemblPlants:TraesCS7B01G060100.6 | EnsemblPlantsGene:TraesCS7B01G060100 | ncoils:Coil | PANTHER:PTHR11693 | PANTHER:PTHR11693:SF24 | SEG:seg |
| MapMan:35.2 | : | : | : | : | : |
Description
No Description!
Coordinates
chr7B:+:62689249..62695428
Molecular Weight (calculated)
135595.0 Da
IEP (calculated)
4.939
GRAVY (calculated)
-0.840
Length
1218 amino acids
Sequence
(BLAST)
(BLAST)
0001: MDVDDDVEDD DMDFNPLYRE GSPSETSSSL TSEAECEGTR FENQPSTEVL LCNSSGNGNA GDCVLPKESV SAKGASKVNV PESSSTHLHC ENREGHVNGL
0101: GKEPLRTVAS ISPPVQNTHP LLHEGTEEDA ICRRTRARYS LANYALDELE TFLQESDDDG DLQNVDEEEE YRKFLSAVLS GGGDGTQACQ GDEAQDEDEN
0201: DADFELEIEE ALESDGGENV ENDKSINGRN KKDGHRPQTR KKRPELSRAI NHQQESTKPN LRPIVPNIST IPQVPGQYPS QNINIPSSSS SATGAAVVKG
0301: FTDEQLGQLH ILIYEHVQLM IQTFSLCVLD PSKQRVAADV KKMIVELVGY RDQALARKNT IRQQFYFEGQ HLRSAISHAS SESSQCQWIP LIKNPVMSIL
0401: DVSPLHLALS YLSDVAGAVV KYRKSHVDGT PERIRFRKEP LFPSPVLSTG RDANNISQDR PNNVSTSTPA SPGQSQPKKS LAATLFESTK KESVALVPFD
0501: IARLAQRFYP LFNFSLFPHK PPPAAMVSRL LFTDAEDGLL ALGLLEYNND WEAIQKRFLP CKSTHQIFVR QKNRSSAKAT DNPVKDVRRM KNSPLSSEEV
0601: QRIEEVVISV SADYLLFPVE LFVVPYRDPS LLQRQWRVAN GVQRSYSKSE ALKAKRRTYE AKRRQLKASM ADSQVGREQE TDNDAFEDVE NDDDDDDDGD
0701: GDDPYVNEAF LADTENRSMN MMQTGTSLND ECGSAYGRFE QHNRNGMRHG VGAAYIPFSS CASDGPSTKR VFGVTLDEPQ ASQLSKEKGS HVVKLAPDLP
0801: PVNLPPSVRV ISQMEFHQNA AQDLFPVPPP TFTECVYTQL NLFPHHSTTD RSQQHGHDAR SMEDGAEQDF QMHPLLFQHP REVLSSHSHL VQNLTSHSRN
0901: YNLFPFEKVQ VEKSNKQTTD CMERAPVNAN TIDFHPLLQR SEAEMHVEVP EEDCHPLSNQ SDGRIREPPV DDQSTVREAS TSERENGVDM QESTSPCERD
1001: NNIDLDIHLC SSVDFRIAKD LRSTPSKSRI QPERPVKDRA SISNSQPGNA SPHHDTEGPG EETMQGIVME QEELSDSEEE SQHVEFECEE MDDSEDEQVQ
1101: GTEPCSTTNK GTSTSIVCSE VQENNDQCQT QQGLKQVAKQ GVGSKRKSRG SSSARPVRAK SKPTDADAEK HTGTRRSRRI SKSRSRASES SQAKMPEEAG
1201: PEHKSRESRR SRKSPAPS
0101: GKEPLRTVAS ISPPVQNTHP LLHEGTEEDA ICRRTRARYS LANYALDELE TFLQESDDDG DLQNVDEEEE YRKFLSAVLS GGGDGTQACQ GDEAQDEDEN
0201: DADFELEIEE ALESDGGENV ENDKSINGRN KKDGHRPQTR KKRPELSRAI NHQQESTKPN LRPIVPNIST IPQVPGQYPS QNINIPSSSS SATGAAVVKG
0301: FTDEQLGQLH ILIYEHVQLM IQTFSLCVLD PSKQRVAADV KKMIVELVGY RDQALARKNT IRQQFYFEGQ HLRSAISHAS SESSQCQWIP LIKNPVMSIL
0401: DVSPLHLALS YLSDVAGAVV KYRKSHVDGT PERIRFRKEP LFPSPVLSTG RDANNISQDR PNNVSTSTPA SPGQSQPKKS LAATLFESTK KESVALVPFD
0501: IARLAQRFYP LFNFSLFPHK PPPAAMVSRL LFTDAEDGLL ALGLLEYNND WEAIQKRFLP CKSTHQIFVR QKNRSSAKAT DNPVKDVRRM KNSPLSSEEV
0601: QRIEEVVISV SADYLLFPVE LFVVPYRDPS LLQRQWRVAN GVQRSYSKSE ALKAKRRTYE AKRRQLKASM ADSQVGREQE TDNDAFEDVE NDDDDDDDGD
0701: GDDPYVNEAF LADTENRSMN MMQTGTSLND ECGSAYGRFE QHNRNGMRHG VGAAYIPFSS CASDGPSTKR VFGVTLDEPQ ASQLSKEKGS HVVKLAPDLP
0801: PVNLPPSVRV ISQMEFHQNA AQDLFPVPPP TFTECVYTQL NLFPHHSTTD RSQQHGHDAR SMEDGAEQDF QMHPLLFQHP REVLSSHSHL VQNLTSHSRN
0901: YNLFPFEKVQ VEKSNKQTTD CMERAPVNAN TIDFHPLLQR SEAEMHVEVP EEDCHPLSNQ SDGRIREPPV DDQSTVREAS TSERENGVDM QESTSPCERD
1001: NNIDLDIHLC SSVDFRIAKD LRSTPSKSRI QPERPVKDRA SISNSQPGNA SPHHDTEGPG EETMQGIVME QEELSDSEEE SQHVEFECEE MDDSEDEQVQ
1101: GTEPCSTTNK GTSTSIVCSE VQENNDQCQT QQGLKQVAKQ GVGSKRKSRG SSSARPVRAK SKPTDADAEK HTGTRRSRRI SKSRSRASES SQAKMPEEAG
1201: PEHKSRESRR SRKSPAPS
0001: MKSLDQVETL ISGPPSEPSS PNRDLDKDEE EEEECEYDDE EEDVDFNPFL KDSPSREASS SLSSEVETLD GEIVNSITTV PQTLEGRQGK EDIAMPSNDV
0101: SCQEPPIPDE RTVGAANENG EQLVIQTQKQ DLMSTEEDDA ICKRTRARYS LASFTLDDLE AFLQETDDED DIPNVDDEEE YRKFLAAVLH SGDTEVPLAQ
0201: TGTNDDDDDD DEDNDLDFEI ELEEALETDD EEIIPEKVTT GDNISTKRRP VTRQKRRQNI SIHHKNNSPE QAGRLLRPLV PILPIAPPGR RVSATEAVAS
0301: SENRTINGFT QAQMGELHSL IHDHLQLLIQ VYSLCALDHS RQSIGTHVQG LLSEMLKQHQ GYISRRSHLL VTGSASSVLD VVGLAGRYLV DVSDAVQDYR
0401: RCQVESGFDT SSQRVPLFTL PHQEVGGEIV NYPLSSPSSS KSPSGQQQAK KTLAATLVES AQKQSVALVH KDIAKLAKRF MPLFKVSLYP HKPPHAAVAN
0501: RVLFTDAEDE LLALGIMEYN SDWKAIKQRF LPSKGEHQIY VRQKNRRSSK APENPIKAVL RMKSSPLTPQ EILRIQEGLK YFKYDWTSVW KFVVPYRDPS
0601: LLPRQWRTAL GIQKSYKLDA VKKEKRRLYD TNRKFREQQA SAKEDRYGAS KANEYHVGGE LVESSGEAYL HEGFLADWRP GMPTFFSSAP MHSFDKAKDV
0701: PGDRHESVQT CIVEGSKNPE LCGAQILTCT QRLAPSFIPM YRHTSGTAPG ASKAPIIARP YRSRKVFNRS VVRLAPDLPP VNLPSSVRVI SQSVFAKNQS
0801: ETSSKTCIIN GGMSDVSGRG NFGIETPCFS ADRDNNGPPS EKVVDLQEDV PAESSSGMDK QSNDSDLQMH PLLFRTPEHG QITCYPANRD PGGSSFSFFS
0901: ENRPQLLSLF NSPKQINHSA DQLHRNSSSN EYETAQGDIC FHPLLQRTEY ETSYVISRRG NLDPDIGKKD KLCQLQDTSG AVEKTAIPVT GRNDVSLEPF
1001: SSSTPGKNVN LDIYLSTSSS KVNNGGSVSA ANISEAPDIC MAQLNDGSEV PGSAPPSDNI SRCIEEMADQ SNLGIVMEQE ELSDSDDEMM EEEHVEFECE
1101: EMADSEGEEG SECEENIEMQ DKDNRNSVVE ITSTDVDSGK ELGKDSPNSP WLSLDPSSRR LSSNVKDREK IEATNETTIS QFGPSRSRKK GTPVKSRDAE
1201: SKEEAGVARL RLGPLALPPM KKPRKCGGQA ETSPSIETT
0101: SCQEPPIPDE RTVGAANENG EQLVIQTQKQ DLMSTEEDDA ICKRTRARYS LASFTLDDLE AFLQETDDED DIPNVDDEEE YRKFLAAVLH SGDTEVPLAQ
0201: TGTNDDDDDD DEDNDLDFEI ELEEALETDD EEIIPEKVTT GDNISTKRRP VTRQKRRQNI SIHHKNNSPE QAGRLLRPLV PILPIAPPGR RVSATEAVAS
0301: SENRTINGFT QAQMGELHSL IHDHLQLLIQ VYSLCALDHS RQSIGTHVQG LLSEMLKQHQ GYISRRSHLL VTGSASSVLD VVGLAGRYLV DVSDAVQDYR
0401: RCQVESGFDT SSQRVPLFTL PHQEVGGEIV NYPLSSPSSS KSPSGQQQAK KTLAATLVES AQKQSVALVH KDIAKLAKRF MPLFKVSLYP HKPPHAAVAN
0501: RVLFTDAEDE LLALGIMEYN SDWKAIKQRF LPSKGEHQIY VRQKNRRSSK APENPIKAVL RMKSSPLTPQ EILRIQEGLK YFKYDWTSVW KFVVPYRDPS
0601: LLPRQWRTAL GIQKSYKLDA VKKEKRRLYD TNRKFREQQA SAKEDRYGAS KANEYHVGGE LVESSGEAYL HEGFLADWRP GMPTFFSSAP MHSFDKAKDV
0701: PGDRHESVQT CIVEGSKNPE LCGAQILTCT QRLAPSFIPM YRHTSGTAPG ASKAPIIARP YRSRKVFNRS VVRLAPDLPP VNLPSSVRVI SQSVFAKNQS
0801: ETSSKTCIIN GGMSDVSGRG NFGIETPCFS ADRDNNGPPS EKVVDLQEDV PAESSSGMDK QSNDSDLQMH PLLFRTPEHG QITCYPANRD PGGSSFSFFS
0901: ENRPQLLSLF NSPKQINHSA DQLHRNSSSN EYETAQGDIC FHPLLQRTEY ETSYVISRRG NLDPDIGKKD KLCQLQDTSG AVEKTAIPVT GRNDVSLEPF
1001: SSSTPGKNVN LDIYLSTSSS KVNNGGSVSA ANISEAPDIC MAQLNDGSEV PGSAPPSDNI SRCIEEMADQ SNLGIVMEQE ELSDSDDEMM EEEHVEFECE
1101: EMADSEGEEG SECEENIEMQ DKDNRNSVVE ITSTDVDSGK ELGKDSPNSP WLSLDPSSRR LSSNVKDREK IEATNETTIS QFGPSRSRKK GTPVKSRDAE
1201: SKEEAGVARL RLGPLALPPM KKPRKCGGQA ETSPSIETT
Arabidopsis Description
DUO3Homeodomain-like superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4I6S6]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.