Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 1
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7D01G156400.1 | Wheat | nucleus | 98.06 | 98.22 |
| TraesCS7B01G060100.6 | Wheat | nucleus | 91.75 | 93.19 |
| HORVU7Hr1G031870.4 | Barley | mitochondrion | 85.93 | 86.14 |
| KXG19518 | Sorghum | nucleus | 59.18 | 60.8 |
| Zm00001d020204_P009 | Maize | nucleus | 59.66 | 60.64 |
| EER96624 | Sorghum | nucleus | 59.9 | 60.29 |
| Os03t0672700-01 | Rice | cytosol, nucleus | 7.76 | 51.06 |
| GSMUA_Achr10P... | Banana | nucleus | 7.92 | 44.34 |
| CDX79498 | Canola | nucleus | 14.87 | 40.35 |
| GSMUA_Achr3P32530_001 | Banana | nucleus | 36.22 | 33.68 |
| CDY47837 | Canola | nucleus | 29.99 | 31.93 |
| CDY08384 | Canola | nucleus | 29.59 | 31.5 |
| AT1G64570.1 | Thale cress | nucleus | 31.12 | 31.07 |
| Bra027727.1-P | Field mustard | nucleus | 29.75 | 29.65 |
| KRH11430 | Soybean | nucleus | 32.5 | 28.65 |
| KRH20856 | Soybean | nucleus | 32.17 | 28.31 |
| Solyc06g072270.2.1 | Tomato | nucleus | 34.2 | 23.83 |
| VIT_10s0116g01740.t01 | Wine grape | cytosol | 34.36 | 22.42 |
Protein Annotations
| EnsemblPlants:TraesCS7A01G156000.1 | EnsemblPlantsGene:TraesCS7A01G156000 | ncoils:Coil | PANTHER:PTHR11693 | PANTHER:PTHR11693:SF24 | SEG:seg |
| MapMan:35.2 | : | : | : | : | : |
Description
No Description!
Coordinates
chr7A:+:108810662..108816746
Molecular Weight (calculated)
137808.0 Da
IEP (calculated)
5.011
GRAVY (calculated)
-0.870
Length
1237 amino acids
Sequence
(BLAST)
(BLAST)
0001: MDVDDDVEDD DMDFNPLYRE GSPSETSSSL TSEAECEGTS FQNQPSTEVL LRNSPGNGNA GDCVLPTESL SAKGACKENA GDCVLPKESL SAKGACKENV
0101: PASSSTQLHC ENGEGRVNGL GKKPLQTVAS FSPPVQNTHP LLHEGTEEDA ICRRTRARYS LANYALDELE TFLQESDDDG DLQNVDEEEE YRKFLSAVLS
0201: GGGDGTQPCQ GDETQDEDEN DADFELEIEE ALESDGGENV ENDKNINGRN KKDGHRPQTR KKRPESSRAV NHQQESTKPN LRPIVPNFSP TPQVPGQYPS
0301: QNINVPSSSS SATGAAVVKG FTDEQLGQLH ILIYEHVQLM IQTFSLCVLD PSKQRVAADV KKMIVELVGY RDQALARKNT IRQQFYFEGQ HLRSAISHAF
0401: SETSQCQWIP LIKNPVMSIL DVSPLHLALS YLSDVAGAVV KYRKSHVDGT PERIRFRKEP LFPSPVLSTG RDANNISQDR PNNVSTSTPA SPGQSQPKKS
0501: LAATLFESTK KESVALVPFD IARLAQRFYP LFNFSLFPHK PPPAAMVSRL LFTDAEDGLL ALGLLEYNND WEAIQKRFLP CKSTHQIFVR QKNRSSAKAT
0601: DNPVKDVRRM KNSPLTSEEV QRIEEGLKIF KHDWTSVWKF VVPYRDPSLL QRQWRVANGI QRSYSKSEAL KAKRRTYEAK RRQLKASMAD SQVGREQETD
0701: NDAFEDVEND DDDDDDDDDG DDPYVNEAFL ADTENRSMNM MQTGTSLNDE CGSAYGRFEQ HKRNGTHHGV GAAYIPFSSC ASDGPSTKRV FGVTLDEPQA
0801: SQLSKEKGSH VVKLAPDLPP VNLPPSVRVI SQMEFHQNAA QDLFPVPPPT FTECVYTQLN LFPHHSTTDR SQQHGRDARS MEDGAEQDFQ MHPLLFQHPR
0901: EVLSSHSHSI QNLTSHSRNY NLFPFEKVQV EKSNTQTTDG MERAPVNANT IDFHPLLQRP EAEMHVEVPE EDCRPLSNQS DGRIREPPVD DQSTVREAST
1001: SKRENGIDMQ ESTSPCERDT NIDLDIHLCS SVDFRIANDL RSTPSKSRIQ PERPVKDRAS ILNLQPGNAS PHHDTERPGE ETMQGIVMEQ EELSDSEEES
1101: QHVEFECEEM DDSEDEQVQG TEPCSTTNKG TSASIVCSEL QENNDQCQTQ QGLKQVAKQG VGSKRKSRGS SSARSVRAKL KPTDADAEKH TGTRRSRRIS
1201: RSRSRASESS QAKMPEEAGP EHKSSESRRS RKSPAPS
0101: PASSSTQLHC ENGEGRVNGL GKKPLQTVAS FSPPVQNTHP LLHEGTEEDA ICRRTRARYS LANYALDELE TFLQESDDDG DLQNVDEEEE YRKFLSAVLS
0201: GGGDGTQPCQ GDETQDEDEN DADFELEIEE ALESDGGENV ENDKNINGRN KKDGHRPQTR KKRPESSRAV NHQQESTKPN LRPIVPNFSP TPQVPGQYPS
0301: QNINVPSSSS SATGAAVVKG FTDEQLGQLH ILIYEHVQLM IQTFSLCVLD PSKQRVAADV KKMIVELVGY RDQALARKNT IRQQFYFEGQ HLRSAISHAF
0401: SETSQCQWIP LIKNPVMSIL DVSPLHLALS YLSDVAGAVV KYRKSHVDGT PERIRFRKEP LFPSPVLSTG RDANNISQDR PNNVSTSTPA SPGQSQPKKS
0501: LAATLFESTK KESVALVPFD IARLAQRFYP LFNFSLFPHK PPPAAMVSRL LFTDAEDGLL ALGLLEYNND WEAIQKRFLP CKSTHQIFVR QKNRSSAKAT
0601: DNPVKDVRRM KNSPLTSEEV QRIEEGLKIF KHDWTSVWKF VVPYRDPSLL QRQWRVANGI QRSYSKSEAL KAKRRTYEAK RRQLKASMAD SQVGREQETD
0701: NDAFEDVEND DDDDDDDDDG DDPYVNEAFL ADTENRSMNM MQTGTSLNDE CGSAYGRFEQ HKRNGTHHGV GAAYIPFSSC ASDGPSTKRV FGVTLDEPQA
0801: SQLSKEKGSH VVKLAPDLPP VNLPPSVRVI SQMEFHQNAA QDLFPVPPPT FTECVYTQLN LFPHHSTTDR SQQHGRDARS MEDGAEQDFQ MHPLLFQHPR
0901: EVLSSHSHSI QNLTSHSRNY NLFPFEKVQV EKSNTQTTDG MERAPVNANT IDFHPLLQRP EAEMHVEVPE EDCRPLSNQS DGRIREPPVD DQSTVREAST
1001: SKRENGIDMQ ESTSPCERDT NIDLDIHLCS SVDFRIANDL RSTPSKSRIQ PERPVKDRAS ILNLQPGNAS PHHDTERPGE ETMQGIVMEQ EELSDSEEES
1101: QHVEFECEEM DDSEDEQVQG TEPCSTTNKG TSASIVCSEL QENNDQCQTQ QGLKQVAKQG VGSKRKSRGS SSARSVRAKL KPTDADAEKH TGTRRSRRIS
1201: RSRSRASESS QAKMPEEAGP EHKSSESRRS RKSPAPS
0001: MKSLDQVETL ISGPPSEPSS PNRDLDKDEE EEEECEYDDE EEDVDFNPFL KDSPSREASS SLSSEVETLD GEIVNSITTV PQTLEGRQGK EDIAMPSNDV
0101: SCQEPPIPDE RTVGAANENG EQLVIQTQKQ DLMSTEEDDA ICKRTRARYS LASFTLDDLE AFLQETDDED DIPNVDDEEE YRKFLAAVLH SGDTEVPLAQ
0201: TGTNDDDDDD DEDNDLDFEI ELEEALETDD EEIIPEKVTT GDNISTKRRP VTRQKRRQNI SIHHKNNSPE QAGRLLRPLV PILPIAPPGR RVSATEAVAS
0301: SENRTINGFT QAQMGELHSL IHDHLQLLIQ VYSLCALDHS RQSIGTHVQG LLSEMLKQHQ GYISRRSHLL VTGSASSVLD VVGLAGRYLV DVSDAVQDYR
0401: RCQVESGFDT SSQRVPLFTL PHQEVGGEIV NYPLSSPSSS KSPSGQQQAK KTLAATLVES AQKQSVALVH KDIAKLAKRF MPLFKVSLYP HKPPHAAVAN
0501: RVLFTDAEDE LLALGIMEYN SDWKAIKQRF LPSKGEHQIY VRQKNRRSSK APENPIKAVL RMKSSPLTPQ EILRIQEGLK YFKYDWTSVW KFVVPYRDPS
0601: LLPRQWRTAL GIQKSYKLDA VKKEKRRLYD TNRKFREQQA SAKEDRYGAS KANEYHVGGE LVESSGEAYL HEGFLADWRP GMPTFFSSAP MHSFDKAKDV
0701: PGDRHESVQT CIVEGSKNPE LCGAQILTCT QRLAPSFIPM YRHTSGTAPG ASKAPIIARP YRSRKVFNRS VVRLAPDLPP VNLPSSVRVI SQSVFAKNQS
0801: ETSSKTCIIN GGMSDVSGRG NFGIETPCFS ADRDNNGPPS EKVVDLQEDV PAESSSGMDK QSNDSDLQMH PLLFRTPEHG QITCYPANRD PGGSSFSFFS
0901: ENRPQLLSLF NSPKQINHSA DQLHRNSSSN EYETAQGDIC FHPLLQRTEY ETSYVISRRG NLDPDIGKKD KLCQLQDTSG AVEKTAIPVT GRNDVSLEPF
1001: SSSTPGKNVN LDIYLSTSSS KVNNGGSVSA ANISEAPDIC MAQLNDGSEV PGSAPPSDNI SRCIEEMADQ SNLGIVMEQE ELSDSDDEMM EEEHVEFECE
1101: EMADSEGEEG SECEENIEMQ DKDNRNSVVE ITSTDVDSGK ELGKDSPNSP WLSLDPSSRR LSSNVKDREK IEATNETTIS QFGPSRSRKK GTPVKSRDAE
1201: SKEEAGVARL RLGPLALPPM KKPRKCGGQA ETSPSIETT
0101: SCQEPPIPDE RTVGAANENG EQLVIQTQKQ DLMSTEEDDA ICKRTRARYS LASFTLDDLE AFLQETDDED DIPNVDDEEE YRKFLAAVLH SGDTEVPLAQ
0201: TGTNDDDDDD DEDNDLDFEI ELEEALETDD EEIIPEKVTT GDNISTKRRP VTRQKRRQNI SIHHKNNSPE QAGRLLRPLV PILPIAPPGR RVSATEAVAS
0301: SENRTINGFT QAQMGELHSL IHDHLQLLIQ VYSLCALDHS RQSIGTHVQG LLSEMLKQHQ GYISRRSHLL VTGSASSVLD VVGLAGRYLV DVSDAVQDYR
0401: RCQVESGFDT SSQRVPLFTL PHQEVGGEIV NYPLSSPSSS KSPSGQQQAK KTLAATLVES AQKQSVALVH KDIAKLAKRF MPLFKVSLYP HKPPHAAVAN
0501: RVLFTDAEDE LLALGIMEYN SDWKAIKQRF LPSKGEHQIY VRQKNRRSSK APENPIKAVL RMKSSPLTPQ EILRIQEGLK YFKYDWTSVW KFVVPYRDPS
0601: LLPRQWRTAL GIQKSYKLDA VKKEKRRLYD TNRKFREQQA SAKEDRYGAS KANEYHVGGE LVESSGEAYL HEGFLADWRP GMPTFFSSAP MHSFDKAKDV
0701: PGDRHESVQT CIVEGSKNPE LCGAQILTCT QRLAPSFIPM YRHTSGTAPG ASKAPIIARP YRSRKVFNRS VVRLAPDLPP VNLPSSVRVI SQSVFAKNQS
0801: ETSSKTCIIN GGMSDVSGRG NFGIETPCFS ADRDNNGPPS EKVVDLQEDV PAESSSGMDK QSNDSDLQMH PLLFRTPEHG QITCYPANRD PGGSSFSFFS
0901: ENRPQLLSLF NSPKQINHSA DQLHRNSSSN EYETAQGDIC FHPLLQRTEY ETSYVISRRG NLDPDIGKKD KLCQLQDTSG AVEKTAIPVT GRNDVSLEPF
1001: SSSTPGKNVN LDIYLSTSSS KVNNGGSVSA ANISEAPDIC MAQLNDGSEV PGSAPPSDNI SRCIEEMADQ SNLGIVMEQE ELSDSDDEMM EEEHVEFECE
1101: EMADSEGEEG SECEENIEMQ DKDNRNSVVE ITSTDVDSGK ELGKDSPNSP WLSLDPSSRR LSSNVKDREK IEATNETTIS QFGPSRSRKK GTPVKSRDAE
1201: SKEEAGVARL RLGPLALPPM KKPRKCGGQA ETSPSIETT
Arabidopsis Description
DUO3Homeodomain-like superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4I6S6]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.