CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, extracellular

Predictor Summary:

extracellular 6
endoplasmic reticulum 6
vacuole 7
plasma membrane 5
golgi 5
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, extracellular
Any Predictor:	plastid, secretory
BaCelLo:	secretory
EpiLoc:	vacuole
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	vacuole
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra033138.1-P	Field mustard	endoplasmic reticulum, extracellular	100.0	100.0
AT4G11650.1	Thale cress	endoplasmic reticulum, extracellular	88.52	88.52
Solyc08g080600.1.1	Tomato	cytosol	24.18	78.67
Solyc08g080610.1.1	Tomato	cytosol	49.59	73.78
PGSC0003DMT400007865	Potato	extracellular	63.11	68.14
Solyc08g080620.1.1	Tomato	extracellular	62.3	67.26
KRH77507	Soybean	extracellular	68.03	66.67
Solyc08g080650.1.1	Tomato	extracellular	64.75	64.23
VIT_02s0025g04340.t01	Wine grape	endoplasmic reticulum, extracellular, plastid	68.85	64.12
PGSC0003DMT400034395	Potato	extracellular	56.56	63.89
PGSC0003DMT400007870	Potato	extracellular	64.34	63.82
PGSC0003DMT400007869	Potato	cytosol	63.93	63.16
Solyc08g080640.1.1	Tomato	extracellular	63.52	62.75
PGSC0003DMT400007868	Potato	extracellular	62.7	61.94
PGSC0003DMT400007906	Potato	extracellular	61.07	59.6
Solyc08g080670.1.1	Tomato	extracellular	60.66	59.2
PGSC0003DMT400007905	Potato	extracellular	60.25	58.8
Solyc08g080660.1.1	Tomato	extracellular	59.84	58.4
CDY41250	Canola	extracellular	54.92	58.01
Solyc11g044390.1.1	Tomato	cytosol	18.44	57.69
Solyc11g044400.1.1	Tomato	cytosol	20.08	56.32
CDY53136	Canola	extracellular	53.28	56.28
Solyc08g080590.2.1	Tomato	nucleus	30.74	47.77
PGSC0003DMT400007866	Potato	endoplasmic reticulum, extracellular	25.0	33.52

Protein Annotations

Gene3D:2.60.110.10	MapMan:35.1	UniProt:A0A078GFP1	EnsemblPlants:CDY25290	ProteinID:CDY25290	ProteinID:CDY25290.1
GO:GO:0006950	GO:GO:0008150	GO:GO:0009605	GO:GO:0009607	GO:GO:0009628	GO:GO:0009651
GO:GO:0009817	EnsemblPlantsGene:GSBRNA2T00029364001	InterPro:IPR001938	InterPro:IPR037176	InterPro:Osmotin/thaumatin-like_sf	PFAM:PF00314
PIRSF:PIRSF002703	PRINTS:PR00347	ScanProsite:PS00316	PFscan:PS51367	PANTHER:PTHR31048	PANTHER:PTHR31048:SF44
SMART:SM00205	SUPFAM:SSF49870	SignalP:SignalP-noTM	TMHMM:TMhelix	InterPro:Thaumatin	InterPro:Thaumatin_CS
UniParc:UPI00025471F4	SEG:seg	:	:	:	:

Description

BnaA02g21660DOsmotin-like protein OSM34 [Source:Projected from Arabidopsis thaliana (AT4G11650) UniProtKB/Swiss-Prot;Acc:P50700]

Coordinates

chrLK032172:-:569746..572003

Molecular Weight (calculated)

26419.9 Da

IEP (calculated)

4.900

GRAVY (calculated)

-0.260

Length

244 amino acids

Sequence
(BLAST)

001: MTNISLSTFI FSILLLISTA TAATFEIINQ CGYTVWAAAS PGGGRRLNSG QSWTLNVPAG TSMARIWGRT NCNFDSSGRG RCETGDCTGG LQCTGWGQPP
101: NTLAEYALNQ FNNLDFYDIS LVDGFNIPME FSATSSNCKR ILCTADINGQ CPNVLRAPGG CNNPCTVFKT NEYCCTNGQG SCSPTGYSKF FKDRCPDAYS
201: YPQDDPTSTF TCSNTNYRVV FCPRARLGAT GTDQLPIQMV TEEN

Best Arabidopsis Sequence Match ( AT4G11650.1 )
(BLAST)

001: MANLLVSTFI FSALLLISTA TAATFEILNQ CSYTVWAAAS PGGGRRLDAG QSWRLDVAAG TKMARIWGRT NCNFDSSGRG RCQTGDCSGG LQCTGWGQPP
101: NTLAEYALNQ FNNLDFYDIS LVDGFNIPME FSPTSSNCHR ILCTADINGQ CPNVLRAPGG CNNPCTVFQT NQYCCTNGQG SCSDTEYSRF FKQRCPDAYS
201: YPQDDPTSTF TCTNTNYRVV FCPRSRLGAT GSHQLPIKMV TEEN

Arabidopsis Description

OSM34OSM34 [Source:UniProtKB/TrEMBL;Acc:A0A178V0T2]
SUBAcon: [endoplasmic reticulum,extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.