Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- extracellular 1
- endoplasmic reticulum 1
- vacuole 3
- plasma membrane 1
- golgi 1
- cytosol 2
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc08g080600.1.1 | Tomato | cytosol | 39.63 | 86.67 |
| PGSC0003DMT400007865 | Potato | extracellular | 92.07 | 66.81 |
| Solyc11g044390.1.1 | Tomato | cytosol | 29.88 | 62.82 |
| Solyc08g080620.1.1 | Tomato | extracellular | 85.37 | 61.95 |
| Solyc08g080650.1.1 | Tomato | extracellular | 87.2 | 58.13 |
| Solyc08g080640.1.1 | Tomato | extracellular | 85.37 | 56.68 |
| Solyc08g080670.1.1 | Tomato | extracellular | 80.49 | 52.8 |
| Solyc08g080660.1.1 | Tomato | extracellular | 79.27 | 52.0 |
| Bra033138.1-P | Field mustard | endoplasmic reticulum, extracellular | 73.78 | 49.59 |
| CDY25290 | Canola | endoplasmic reticulum, extracellular | 73.78 | 49.59 |
| AT4G11650.1 | Thale cress | endoplasmic reticulum, extracellular | 73.78 | 49.59 |
| Solyc12g056390.1.1 | Tomato | extracellular | 68.29 | 49.34 |
| Solyc11g044400.1.1 | Tomato | cytosol | 25.61 | 48.28 |
| KRH77507 | Soybean | extracellular | 69.51 | 45.78 |
| VIT_02s0025g04340.t01 | Wine grape | endoplasmic reticulum, extracellular, plastid | 70.73 | 44.27 |
| Solyc12g056360.1.1 | Tomato | extracellular | 61.59 | 44.1 |
| Solyc12g056380.1.1 | Tomato | extracellular | 58.54 | 41.92 |
| Solyc12g056370.1.1 | Tomato | cytosol | 51.83 | 36.32 |
| Solyc08g080590.2.1 | Tomato | nucleus | 26.22 | 27.39 |
Protein Annotations
| EnsemblPlants:Solyc08g080610.1.1 | EnsemblPlantsGene:Solyc08g080610.1 | Gene3D:2.60.110.10 | InterPro:IPR001938 | InterPro:IPR037176 | InterPro:Osmotin/thaumatin-like_sf |
| InterPro:Thaumatin | InterPro:Thaumatin_CS | PANTHER:PTHR31048 | PANTHER:PTHR31048:SF47 | PFAM:PF00314 | PFscan:PS51367 |
| PIRSF:PIRSF002703 | PRINTS:PR00347 | ScanProsite:PS00316 | SMART:SM00205 | SUPFAM:SSF49870 | UniParc:UPI000276BAE0 |
| UniProt:K4CP61 | MapMan:35.1 | : | : | : | : |
Description
No Description!
Coordinates
chr8:+:63852805..63853299
Molecular Weight (calculated)
17762.6 Da
IEP (calculated)
5.047
GRAVY (calculated)
-0.451
Length
164 amino acids
Sequence
(BLAST)
(BLAST)
001: MARIWGRTKC NFDGAGRGSC ETGDCGGVLQ CTGWGKPPNT LTEYALNQFN NLDFWDISLV DGFNIPMTFA TTNSSGGKCH SIQCTANING ECPSQLKVTG
101: GCNNPCTTFG GQQYCCTQGP CSPTEWSKFF KQRCPDAYSY PQDDATSTFA CPSDSTNYKV VFCP
101: GCNNPCTTFG GQQYCCTQGP CSPTEWSKFF KQRCPDAYSY PQDDATSTFA CPSDSTNYKV VFCP
001: MANYSSIHIL FLVFITSGIA VSAATVFTLQ NSCPYTVWPG ILSGNDNTLG DGGFPLTPGA SVQLTAPAGW SGRFWARTGC NFDASGHGNC GTGDCGGVLK
101: CNGGGVPPVT LAEFTLVGDG GKDFYDVSLV DGYNVEMGIK PQGGSGDCHY AGCVADVNAV CPNELRLMDP HTGIIAACKS ACAAFNSEEF CCTGAHATPQ
201: TCSPTHYSAM FKSACPGAYS YAYDDATSTF TCTGSNYLIS FCPTRN
101: CNGGGVPPVT LAEFTLVGDG GKDFYDVSLV DGYNVEMGIK PQGGSGDCHY AGCVADVNAV CPNELRLMDP HTGIIAACKS ACAAFNSEEF CCTGAHATPQ
201: TCSPTHYSAM FKSACPGAYS YAYDDATSTF TCTGSNYLIS FCPTRN
Arabidopsis Description
Pathogenesis-related thaumatin superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q1PFD2]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.