Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 6
- endoplasmic reticulum 4
- vacuole 5
- plasma membrane 4
- golgi 4
- plastid 2
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400010887 | Potato | cytosol, mitochondrion, nucleus | 64.63 | 87.06 |
| Solyc12g056360.1.1 | Tomato | extracellular | 72.05 | 72.05 |
| VIT_02s0025g04320.t01 | Wine grape | cytosol | 26.2 | 63.83 |
| Solyc08g080600.1.1 | Tomato | cytosol | 20.52 | 62.67 |
| Solyc08g080610.1.1 | Tomato | cytosol | 41.92 | 58.54 |
| Solyc12g056390.1.1 | Tomato | extracellular | 57.64 | 58.15 |
| GSMUA_Achr7P16510_001 | Banana | endoplasmic reticulum, extracellular | 45.85 | 57.69 |
| KRH59832 | Soybean | extracellular | 55.02 | 56.76 |
| KRH27960 | Soybean | endoplasmic reticulum, extracellular | 55.46 | 56.7 |
| Solyc08g080620.1.1 | Tomato | extracellular | 55.46 | 56.19 |
| TraesCS4A01G296400.1 | Wheat | cytosol | 24.45 | 55.45 |
| KRH77506 | Soybean | extracellular | 53.71 | 55.16 |
| KRH59826 | Soybean | extracellular | 52.84 | 54.02 |
| GSMUA_Achr4P31970_001 | Banana | extracellular | 41.48 | 53.67 |
| GSMUA_Achr6P31470_001 | Banana | endoplasmic reticulum, extracellular | 42.79 | 52.97 |
| TraesCS4B01G017300.1 | Wheat | cytosol, mitochondrion | 39.74 | 52.6 |
| Os03t0663500-00 | Rice | extracellular | 49.78 | 52.05 |
| GSMUA_Achr6P31500_001 | Banana | endoplasmic reticulum, extracellular | 30.57 | 51.47 |
| Solyc08g080650.1.1 | Tomato | extracellular | 55.02 | 51.22 |
| Solyc08g080640.1.1 | Tomato | extracellular | 54.15 | 50.2 |
| Zm00001d021901_P001 | Maize | extracellular | 49.34 | 49.78 |
| Solyc08g080660.1.1 | Tomato | extracellular | 54.15 | 49.6 |
| EER99598 | Sorghum | endoplasmic reticulum, extracellular | 50.22 | 49.36 |
| Solyc08g080670.1.1 | Tomato | extracellular | 53.71 | 49.2 |
| Zm00001d033455_P001 | Maize | extracellular | 49.34 | 49.13 |
| OQU91235 | Sorghum | extracellular | 49.34 | 48.92 |
| Solyc11g044390.1.1 | Tomato | cytosol | 16.59 | 48.72 |
| TraesCS4D01G015600.1 | Wheat | extracellular | 49.34 | 48.09 |
| Solyc11g044400.1.1 | Tomato | cytosol | 17.9 | 47.13 |
| TraesCS4A01G296300.1 | Wheat | extracellular, unclear | 46.72 | 46.72 |
| TraesCS4D01G015800.1 | Wheat | unclear | 46.72 | 45.92 |
| Solyc08g080590.2.1 | Tomato | nucleus | 31.0 | 45.22 |
| GSMUA_Achr9P26190_001 | Banana | extracellular | 40.17 | 45.1 |
| Os03t0661600-01 | Rice | extracellular | 48.91 | 39.86 |
| HORVU5Hr1G051960.1 | Barley | cytosol | 11.35 | 38.24 |
| Solyc12g056370.1.1 | Tomato | cytosol | 36.24 | 35.47 |
Protein Annotations
| EnsemblPlants:Solyc12g056380.1.1 | EnsemblPlantsGene:Solyc12g056380.1 | Gene3D:2.60.110.10 | InterPro:IPR001938 | InterPro:IPR037176 | InterPro:Osmotin/thaumatin-like_sf |
| InterPro:Thaumatin | PANTHER:PTHR31048 | PANTHER:PTHR31048:SF47 | PFAM:PF00314 | PFscan:PS51367 | PIRSF:PIRSF002703 |
| PRINTS:PR00347 | SEG:seg | SMART:SM00205 | SUPFAM:SSF49870 | UniParc:UPI0002769EB3 | UniProt:K4DFW9 |
| MapMan:35.1 | : | : | : | : | : |
Description
No Description!
Coordinates
chr12:+:62317306..62317995
Molecular Weight (calculated)
25465.0 Da
IEP (calculated)
5.250
GRAVY (calculated)
-0.212
Length
229 amino acids
Sequence
(BLAST)
(BLAST)
001: MSFIKSFFIS FYIMNSHFLN QANAIIDIQN NCPFTIWAAA VPGGGRRLEY GDTWKIEPDM TTSSTKKGRI WGRTNCNFDS LRRGQCQTGD CNGLLECQTF
101: SSTPPNTLAE YALNQFNDAD FIGISLVNGF NIPIEFSPVF ADECSTRIRC TADIIGQCPN ELRTPGGCNN PCTIFKTGEY CCTFGNCGPT NYSKFFKDRC
201: STSYSYPSDD LSSLFTCPSG TIYKIVFCP
101: SSTPPNTLAE YALNQFNDAD FIGISLVNGF NIPIEFSPVF ADECSTRIRC TADIIGQCPN ELRTPGGCNN PCTIFKTGEY CCTFGNCGPT NYSKFFKDRC
201: STSYSYPSDD LSSLFTCPSG TIYKIVFCP
001: MANLLVSTFI FSALLLISTA TAATFEILNQ CSYTVWAAAS PGGGRRLDAG QSWRLDVAAG TKMARIWGRT NCNFDSSGRG RCQTGDCSGG LQCTGWGQPP
101: NTLAEYALNQ FNNLDFYDIS LVDGFNIPME FSPTSSNCHR ILCTADINGQ CPNVLRAPGG CNNPCTVFQT NQYCCTNGQG SCSDTEYSRF FKQRCPDAYS
201: YPQDDPTSTF TCTNTNYRVV FCPRSRLGAT GSHQLPIKMV TEEN
101: NTLAEYALNQ FNNLDFYDIS LVDGFNIPME FSPTSSNCHR ILCTADINGQ CPNVLRAPGG CNNPCTVFQT NQYCCTNGQG SCSDTEYSRF FKQRCPDAYS
201: YPQDDPTSTF TCTNTNYRVV FCPRSRLGAT GSHQLPIKMV TEEN
Arabidopsis Description
OSM34OSM34 [Source:UniProtKB/TrEMBL;Acc:A0A178V0T2]
SUBAcon: [endoplasmic reticulum,extracellular]
SUBAcon: [endoplasmic reticulum,extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.